Pituophis catenifer annectens (San Diego gophersnake): 139312938
Help
Entry
139312938 CDS
T11059
Symbol
HCFC1
Name
(RefSeq) host cell factor 1
KO
K14966
host cell factor 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03083
Polycomb repressive complex
pcae04980
Cobalamin transport and metabolism
pcae05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139312938 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
139312938 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139312938 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcae01009
]
139312938 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcae03036
]
139312938 (HCFC1)
03029 Mitochondrial biogenesis [BR:
pcae03029
]
139312938 (HCFC1)
Protein phosphatases and associated proteins [BR:
pcae01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139312938 (HCFC1)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
139312938 (HCFC1)
HMT complexes
COMPASS/SET1 complex
139312938 (HCFC1)
MLL-HCF complex
139312938 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
139312938 (HCFC1)
Mitochondrial biogenesis [BR:
pcae03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
139312938 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
139312938
NCBI-ProteinID:
XP_070794264
LinkDB
All DBs
Position
Unknown
AA seq
2231 aa
AA seq
DB search
MASPVVPSGGSPTGGGATAGLLQPRWKRVIGWSGPVPRPRHGHRAVAIKELIVVFGGGNE
GIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYEL
QASRWEWKRLKAKMPKNGSTPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDL
YTLELRPGSGVGSWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLW
TLDIDSLMWNKPNLRGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCT
NTLACLNLDSMAWEPILMDTLEENTPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCC
KDLWYLETEKPPPPSRVQLVRANTNSLEVSWGSVPTADTYLLQLQKYDIPAASSPATNPV
PSVPVNPPKSPAPAAAAPVTAVQPLAQMGITLLPQTTAVAAATAAAAAAAAAAAPAPPTT
TTIQVLPTVPTSPMPGPPPAAAIATPRPQTVPAVLKVTGPQATTGAPLVTVRSAGQAGKG
PVTVTSLPAGVRMVVPTQSAQGTVIGSSSQMSGMAALAAAAAATQKIPPSSAPTMLSMPA
GTTIVKTVAVSPGTTTLPTTVKVASSPVMVSNPATRMLKTAAAQVGTSVSSSTTNTPTRP
IITVHKSGTVTVAQQAQVMTTVVGGVTKTITLVKSPISVPGGSALISNLGKMMSVVQTKP
VQTSAVTGQASTGPVTQIIQTKGPLPAGTILKLVTSADGKPTTIITSSQAGGTGTKPTIL
GISSVSPNTTKPGTTTIIKTIPMSAIITQAGATGVTSSPGIKSPITIITTKVMTSGTGTP
AKIITAVPKLTTSHGQQSVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPTVTT
LVVKGTTGVTTLGTVTGTVSTSLAGTGAHNTNASLATPITTLGTIATLSSQVINPAAITV
SAAQTTLTAGGGLTTPTITMQPVSQPTQVTLITTPSGVEAQPVHDLPVSILASPTTEQPT
ATVTIAEPGQGDSQPGTVTLVCSNPPRETHDTGTTNTATTTVVGTLGGPAQLQFVCDGQD
GGGLQPNGRVVRICSNPPCEMHETGTTNTATTVLSAGQKICSNPPCETHETGTTNTATIS
KTEKAPSEPPCHTFQTNATGTTMTVKAIVGTGQLVCSNPPRETHETGTTNTATTTTSNMG
QGQPDDGQKELTNTSCQTKQTGSTSTTMTTKTDIPTEHPSAVQIVSFMPAAGLPSVASGT
TTEQSSERLQALKKGQCESHHTHTTNTATTARSLMGQGQPDGEWVGSANPPCQTQQTNST
STTMSVKVDVPVQSSAPCKTHNTDTKDTNLQVCSNPSCETHETGTTNTATVTTSNLGATQ
QVCSNPPCEIHETGTTNTATTATSNIAVGQQVCLNPPCETHETGTTNTATTATSNIAVGQ
QVCSNPPCETHETGTTNTATTTTSNLGAGQNEGAQHQHPPVTQPCETQQTNSTSTTMTPS
IGGDGTQSSSSASAQCGNSELRKTPERESPGIAGSLPQSSTPRICSNPPCETHETGTTHT
ATTVTSSMGTNQDQPPATNGQQGEPEIPVTESPAASSPSATAVTTVSSTQIRAVTTVTQS
TPAPGPSVPNISSLTDVPADEAVPPVETPDATSTDSLPAPSEPLQPSIEMQTAVATPEPQ
GQAQVASTGTPPTEGPLGETAPHPELAPPTEEAPPTPAAPTQESVAMVVLPQATPAAPPS
SEVEHLALPQELMAESQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVL
QAAQQVVMGPGEAMDTSEAAATQAELGHLSSEGPEGQATAIPIVLTQQDLAALVQQQQQQ
LQEAQAAAAAAAAAVQQQQQQQQQQQQQQQQQQQQQQQQTPQHQLSAHLPTEALAPADSL
NDPASESNGLNELASAVTSTVGLLPPTPTESLAPSNTFVAPQPVVVASPAKLQAAAALTE
VANGIEPAPVKPEPPTQPPKVVMKKENQWFDVGIVKATNMVVTHYFLPPDDAPATDDDSG
TTPDYSQFKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSP
DGAHLTWEPPSVTSGKITEYSVYLAIQSPQAGEPKSAAPAQLAFMRVYCGPSPSCLVQSA
SLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESSKDGSMTKPTNKRPLSSSDLK
SAPKKPKADGQ
NT seq
6696 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcctgttgtccctagtgggggctccccaacaggtggtggggccactgcaggg
ctgctgcagccccgctggaaacgtgtgattgggtggtcaggccctgtgcctcggccccga
catggacacagagctgtggcaatcaaagagctgattgtggtcttcggagggggcaatgag
ggcatcgtggatgagttgcatgtctataatacagctacaaaccagtggttcatcccagct
gtgcgtggagacattccacctggttgcgctgcatatggttttgtttgtgatgggacccgt
ctcctggtatttggtggaatggttgaatatggcaagtacagcaatgatctgtatgaattg
caggccagccgttgggaatggaagagactcaaggccaagatgcccaagaatgggtccaca
ccatgtccacgccttggccacagcttctcattggtgggcaacaaatgttacctttttggg
ggattggccaatgacagtgaagatcctaagaataacattcccaggtacctaaatgacctc
tataccttggagctgcggccaggatctggtgtggggtcctgggacattcccatcacctat
ggtgtattgcctccaccacgagaatcccatactgctgtggtctacacagaaaaagacaac
aaaaaatccaaactggtcatatacgggggcatgagtggttgtcgtcttggtgatctttgg
acacttgatatcgattctttgatgtggaacaagcctaacctgagaggggtggctccactc
cctcgtagtctgcattcagccacaaccattgggaacaaaatgtatgtatttggtggctgg
gtgcctcttgttatggatgatgtcaaagtggctacacatgaaaaggaatggaaatgcaca
aatactctggcctgcctcaacttagactccatggcttgggagcccattctgatggataca
ctggaagagaatactccacgggcacgtgcagggcattgtgccgtggccattaatacccgc
ttgtacatctggagtggccgtgatggctaccgtaaagcctggaacaaccaggtttgctgc
aaggatctctggtatcttgagactgaaaaacctccacccccttcacgggttcagctggtt
cgtgccaataccaactctttggaagtgagctggggttctgtcccaactgcggatacttac
ttactccaactgcagaaatacgacatcccagctgcctcctcgccagctactaatcctgtg
ccctcagtgcctgtcaatccccccaagagccctgcccctgctgctgccgcacctgtcact
gccgtgcaacctctggcacaaatgggtatcaccctgctgccacagaccacagctgtcgct
gcggccactgctgctgctgctgctgctgctgctgctgctgctcctgccccaccaaccaca
acaaccatccaggtgcttcctactgtgcctacaagcccaatgccagggcctcctccagca
gctgccattgctactcctcgtccacaaactgttccagctgtgctaaaggtcactggccca
caagctaccacaggagcaccactggtaacagtgcggtcagcaggacaagctgggaaaggc
ccagtgaccgtgacttctttgccagctggggtacgcatggtggtacccacacagagtgct
caagggacggtgattggtagcagctcccagatgagtggcatggcagctctggcagctgct
gctgcagccactcagaaaattccaccgtcctcagcccccactatgttaagcatgcctgct
ggtactaccatagttaagactgttgcggtgtccccaggcaccaccacattacccaccaca
gttaaagttgcttcttctccagtcatggtgagcaacccagccacccgcatgctgaagaca
gcagctgctcaggtgggcacctcagtctcttcatccaccactaacacacctaccaggccc
atcatcaccgtgcacaaatcaggcacggtcactgtagcacagcaagcccaggtgatgaca
accgtagtgggtggagtaacgaagaccatcacattggtgaaaagccctatttccgtgcct
ggaggaagtgcattgatttccaatttgggaaaaatgatgtctgttgtgcagaccaaacca
gtccagacatcagctgtaacgggccaagcatcaactggtcctgtgactcagataatccag
accaaagggcctctgcctgctggcactattctgaaactagtgacttcagcagatggcaag
cccaccacaatcatcaccagctctcaggcaggtggcacaggtactaagcctaccatcctg
ggcatcagcagtgtgtcacccaacacaacaaagcctggtaccaccactattatcaagacc
atcccaatgtcagctattattacgcaagcaggtgccacaggtgttactagtagtcctggg
attaagtctcccatcaccattatcaccacaaaagtgatgacctctggcactggtacaccc
gccaagatcattacagcagtacccaaattaaccacaagtcatggacagcaaagcgtgaca
caggtagtgcttaagggagcaccaggacaaccaggcacaatcttgcgaactgtccctatg
ggtggagtacgactcgttacccctgtcactgtgtctgcagtcaagcctactgttaccact
ttggtagtgaaaggaacaacaggagttacaaccttaggcactgtaacaggcacggtctca
acaagcctagctggaactggagcacacaatactaatgcttccttggctacgcctattacc
accttggggaccattgccacactttccagccaggtcatcaacccagctgccatcactgtc
tcagcagcacagacaaccctgacagcaggaggaggcctcaccactcccaccatcactatg
cagcctgtttctcagcctactcaagtcaccctgattacaacccccagcggtgtagaggct
cagccggtgcatgatttgcctgtttctatcttggcctctcccaccacagagcagcccaca
gccacagtcaccatcgctgagccggggcaaggagattcacagccaggcactgttacactg
gtgtgctccaatccaccccgtgaaacacatgatactggcacaaccaacacagctacgacc
acagttgttggcactttgggtgggccagctcagttacagtttgtgtgtgatgggcaggac
ggtggtggcctccagcccaatggtcgagtggtgcggatatgctcaaatcctccttgtgag
atgcatgagactggtacaaccaacacagcaaccactgttctgagtgctgggcaaaagata
tgttccaatccaccttgtgaaactcatgagactggcaccaccaatacagccaccatctcc
aaaacagagaaggcaccctcagagccaccatgccatactttccaaaccaatgccactggc
accactatgacagtaaaagccatcgtaggtacaggtcagctagtgtgttccaatcctccc
cgtgaaacccacgaaactggcactacaaatactgctaccaccaccacctcaaacatgggc
caagggcaacctgatgacggacagaaggaattgactaacacttcatgccaaacaaagcag
acaggtagcaccagcactaccatgacaacaaaaacagatattcccacagagcatccatct
gcagttcaaattgtaagtttcatgccagctgctggcttgcctagtgttgcttctggcact
accacagagcaaagcagtgaaagactacaagccttgaaaaaaggccagtgtgaatcccat
catactcataccaccaatactgccaccacagctcggtccctcatgggccaagggcagcca
gatggcgaatgggtaggatctgccaatcctccgtgccaaacacagcaaaccaactctacc
agcaccaccatgtctgtcaaagttgatgtgccagttcagtcaagtgcaccttgcaagacc
cataacacggataccaaggatacaaatcttcaagtgtgttctaatccatcttgtgaaact
catgaaacaggtaccacaaatacagctaccgtaacgacatcaaacctgggtgctacccag
caggtgtgctcgaatccaccttgtgagattcatgaaacgggcaccaccaacacagctacc
acagcgacttccaacatagctgtgggacagcaggtgtgcttgaatccaccttgtgagact
catgaaacgggcaccaccaataccgctaccacagcgacttccaacatagctgtgggacag
caagtgtgctcaaatccaccttgtgagactcatgaaacgggcaccaccaacaccgctacc
accaccacatcaaacctgggagctggacaaaatgaaggtgcccagcaccagcacccccct
gttacacaaccctgtgaaacgcagcaaaccaactccaccagcaccacaatgacacccagc
atagggggtgatggcacgcagtcttccagctcagcatcagcacaatgtgggaactcagaa
ctgagaaaaactcctgagagagaatcaccagggattgctgggtctttgcctcagagctca
acacccagaatatgctcaaaccctccttgtgagacccatgaaacaggaaccacccatact
gccaccacagttacttcttctatgggtaccaaccaagatcagccacctgctaccaatggg
caacaaggagaacctgagatacctgtgactgagagtccagctgccagcagccccagtgct
actgcggtgaccacagtttcctccactcaaatcagagctgtcactacagtcacccagtcc
acaccagcgccagggccttctgtaccgaacatctcctcgctcactgatgtccctgcagac
gaggcagttccccctgttgaaactcctgatgccaccagcacagattcccttcctgcaccc
tctgaaccactgcagccctccatagagatgcagacagcagttgcaacccctgagcctcag
gggcaagcacaggttgcctcaactggcacaccgccaaccgaaggtcctctgggtgaaact
gctccccatccagaacttgcccctcctactgaagaggcaccacccacaccagcagccccc
acccaagagtctgtggctatggtggtgctgccccaggccactcctgcagctccgccatcc
tcagaggtggagcatttagcattgcctcaggaactgatggcggagagccaggcgggcacc
accactctgatggtgacaggattgactcctgaggaactagctgtaacagctgctgccgag
gctgctgcccaagctgctgccactgaagaggcacaagccctggccatccaggcggtcttg
caagcagcccagcaggttgtaatgggtcctggagaagccatggatacctcagaggcagca
gccacacaggctgaactaggccacctgagttcagagggccctgaaggacaggccaccgct
atccccatcgtgcttactcagcaagacttggcagccctggtgcagcagcagcaacagcag
cttcaggaggctcaagcagcagcagcggcggcagcagctgccgttcagcagcagcaacag
cagcagcagcaacaacagcagcagcagcaacaacagcagcagcagcagcagcagcagacc
cctcagcatcaattatctgcccacttgcctacagaagccctggctcctgctgatagcctc
aatgatcctgccagtgagagtaatggcctcaatgagttggctagtgcagtgaccagcacg
gttgggctgttacctcccactcccacagagagtcttgctccttcaaatacttttgtggcc
ccacagcctgtggtagtagccagcccagcgaaattgcaggcagcagctgccctgactgaa
gttgctaatggaattgaaccagctccagtgaaaccagagcctcccacacagcctccaaaa
gtggttatgaagaaggaaaatcaatggtttgatgtgggtattgtcaaggcaaccaacatg
gtggtgacacactacttcctgccgcctgatgatgcacctgctacagatgatgattcagga
actactcctgattattctcaattcaagaagcaggagctgcagcctggtactgcttataag
ttccgagtggcaggaattaatgcctgcggacgaggccctttcagtgaaatctcagcgttc
aagacctgtctgcctggttttcctggagcaccttgtgccattaaaatcagtaaaagtccg
gacggggcccacttgacttgggaaccaccttcagtcacctctggaaaaatcacagaatac
tcggtgtacctggccatccagagtcctcaggcgggtgaacctaagagtgcagcacctgcc
caactggccttcatgcgggtttactgtgggcccagtccttcgtgcctggtccagtcagct
agtctctccaatgcccatatagactacaccacaaagcctgccattattttccgcattgct
gcccgcaacgagaagggctatggtcctgccacacaagttcggtggcttcaagaatccagt
aaagatggatctatgacaaaaccaaccaacaaacggccgctttcatcttctgatttgaaa
agtgctccaaagaagcccaaagcagatgggcagtga
DBGET
integrated database retrieval system
