Pituophis catenifer annectens (San Diego gophersnake): 139313113
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Entry
139313113 CDS
T11059
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03013
Nucleocytoplasmic transport
pcae03015
mRNA surveillance pathway
pcae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139313113
09122 Translation
03013 Nucleocytoplasmic transport
139313113
03015 mRNA surveillance pathway
139313113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139313113
03041 Spliceosome [BR:
pcae03041
]
139313113
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
139313113
Spliceosome [BR:
pcae03041
]
Common components
Common spliceosomal components
Cap binding complex
139313113
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
DUF1003
XkdW
Motif
Other DBs
NCBI-GeneID:
139313113
NCBI-ProteinID:
XP_070794595
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MSRRRHRDENDEQQHKRRRTSETVEVTEMLEYLISTLGEESSAPLESNVDNVTKVFEAHL
PNFKSKILRLLCTVARLLPQKMTLYTTLVGLLNAKNYNFGGEFVEAMIRQLKECLKVNLY
NEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYVYAFLSSLPWVG
KELYEKKDTEMEHILSTVENYLKRRQKTHVPMLQVWSVDKPHPQEEYLDCLWAQIQKMKK
DHWQERHIPRPYLAFDSVLCEALQHNLPPFTPPPHTADSVYPMPRVTFRMFDYTDDPEGP
IMPGSHSVERFVIEENLHCIIRSFWKERMTCAVQLTSYPGNHKIPLNYHIVEVIFAELFQ
LPVPPHMEIMYTTLFIELCKLQPGSLPQVLAQATEMLYMRLDTMNTICIDRFINWFSHHL
SNFEFRWSWEDWSDCVSEDLERARPRFVREVLEKCMRLSYHQRIIDIVPASFSVLTPANP
ICIYKYGEESNKSLPGYKVALCLNIAIKNKVSNDEIFTILKDVPNPNQDNDDEGFSFNPL
KIEVFVQSLLHLASKSFSHSFSALGKFREILKTLAESDEGKLHVLRVMYEVWKNHPQMIA
VLVDKMIRTQIVDCAAVANWIFSPELSHDFTRFYIWEILHSTIRKMNKHVMMIQKELEEA
KERLAKQHKRRDDVRSNERGNWPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEH
LARTEAGGIDVITPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDHHILAVFQQ
FCALQT
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaggcggcaccgggacgagaatgacgaacaacagcacaagagaagaagaaca
tctgaaacagttgaagttacagagatgttggaatacttaataagcacattaggagaagag
agttctgctcctttggaaagtaacgtagataatgtgactaaggtgttcgaggcacatctg
ccaaacttcaaaagcaaaatactgagactcctttgtacagttgcacgtctcctaccacaa
aagatgaccctttatacaactcttgttggcttgctgaatgccaagaactacaattttggc
ggcgaatttgtagaagcaatgatacgtcagctgaaagaatgtttgaaagtcaacctgtac
aatgaagctgtttatttagtgcgctttctttctgatcttgtgaattgtcacgtaattgct
gcaccctcaatggtagccatgtttgagaatttcgttagtgtgacgcaggaggaggatgta
cctcaggttcgatgtgactggtacgtgtatgcatttctgtcttctttaccttgggtgggg
aaggagctctatgagaaaaaggatactgaaatggagcacattttgtctactgttgaaaac
tatctgaaacggcgtcagaagactcatgtgcccatgctacaagtttggtccgttgataaa
ccacatccccaagaagagtacttagattgcctttgggctcagattcagaaaatgaagaag
gaccactggcaagagaggcacatcccgaggccctacctggcgttcgacagcgtgctttgt
gaagcgctgcagcacaacctgcctccttttacgcctccaccccacacagctgattccgtt
tacccgatgccaagagtcaccttccggatgtttgactacactgatgatcctgaaggtcca
attatgcctgggagccactctgttgaaagatttgtgatcgaagaaaatcttcattgcatc
atcagatccttttggaaagagagaatgacatgtgctgtccagttaacaagctatccagga
aaccacaagatccctctgaattaccacattgttgaggtaatctttgctgagttgtttcag
cttcctgttccgcctcacatggaaatcatgtacacaacgctttttattgaactctgtaaa
cttcaaccgggatctctacctcaagttcttgcacaagctacagaaatgctgtacatgcgc
ttagatacaatgaatactatctgcatagatcggttcattaattggttttcccaccatctt
agtaattttgagttccgttggagctgggaagattggtcagattgtgtttctgaggatctt
gagagagccaggcctaggtttgtaagggaagtactggaaaaatgcatgaggctttcctac
caccagcgaataatagatattgttcctgctagtttttcggtcttgactcctgcaaatcca
atctgtatttataaatatggagaagaaagtaacaaatctcttcctggatacaaagttgca
ctctgcttaaacattgccatcaaaaataaagtgagtaatgatgaaattttcaccattctg
aaagatgtgcccaatcctaatcaggataacgatgatgaaggcttctcattcaatccttta
aaaatagaagtttttgtccagtcactattacacttagcatcaaagtcattcagtcactct
ttcagtgctctgggaaaatttcgagaaatcctcaaaactctggctgaaagtgatgaaggg
aagcttcatgttctcagagttatgtatgaagtatggaaaaatcatcctcagatgattgct
gtactggtggataagatgattcgaacacagattgtggattgtgctgcagtggcaaactgg
attttttctccagagctatctcatgattttacaagattttacatttgggagatcttacac
tctaccattcgtaagatgaacaagcatgtgatgatgatccaaaaggagctagaagaagct
aaggaaagattagccaagcaacacaaaagacgtgatgatgtcagaagcaatgaacgggga
aattggccccttgaagaacagattgaacgtttgcaagaaaaagttgaatcggctcaaagt
gaacaaaaaaacctcttccttgtaatatttcagcgtttcattatgatcctaacagagcat
ttagcacgaactgaagcaggggggattgatgtaattacaccttggtacaagaactgtata
gagaggctgcagcaaatcttcttacagcatcatcagatcatccaacagtacatggtgacc
ttggagaaccttctatttacagcagaattggatcatcacatattggctgtattccagcag
ttctgtgcactccaaacttga
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