Pituophis catenifer annectens (San Diego gophersnake): 139313115
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Entry
139313115 CDS
T11059
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03013
Nucleocytoplasmic transport
pcae03015
mRNA surveillance pathway
pcae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139313115
09122 Translation
03013 Nucleocytoplasmic transport
139313115
03015 mRNA surveillance pathway
139313115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139313115
03041 Spliceosome [BR:
pcae03041
]
139313115
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
139313115
Spliceosome [BR:
pcae03041
]
Common components
Common spliceosomal components
Cap binding complex
139313115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
DUF1003
LUC7
XkdW
NDUF_B5
NOCA1_mid
Motif
Other DBs
NCBI-GeneID:
139313115
NCBI-ProteinID:
XP_070794598
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MSRRRHRDENDEQPYKKRKVSIAERLESLICKVGEKSLFSLESRIEGLAGVLEADIPNYK
SKILKLLCTVARLLPQKMTIYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKANLYNEAV
CLVRFLSDLVNCHVIAAPSMVAMFENFVNVTQEEDVPQVRCDWYVYAFLSSLPWVGKELY
EKKDTEMEQILSTVETYLKRRQKTHVPMLQVWSADKPHPQEEYLDCLWAQIQKMKKDHWQ
ERHIPRPYLAFDSVLCEALQHNLPPFIAPPHTADSVYPMPRVTFRMFDYTDDPEGPVMPG
SHSVERFVIEENLHCIIRSFWKERKTCAAQLTSYPGNNKIPLNYHIVEVIFAELFQLPVP
PHTEIMYTTLFIELCKLQPGSLPQVLAQATEMLYMRLDTMNTICIDRFINWFSHHLSNFE
FRWSWEDWSDSVSEDLDRPRPKFVREVLEKCMRLSYHQRIIDIVPASFSVLTPANPTCIY
KYGDESNKSLPGYNVALCLSIAIKNKASNDEIFTILKDVPNLNQEEDDDEGFSFNPLKIE
VFVQTLLHLASKSFSHSFSALGKFREALRTLAESDEGKLHVLRVMYEVWKNHPQMIAVLV
DKMIRTQIVDCAAVANWIFSPELSHDFTRFYIWEILHSTIRKMNKHVMMIQKELEEAKER
LAKQQKRRDDSRRNERENWPIEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLVR
CETGGIDVITPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDHHILAVFQQFCA
LQA
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaggcggcacagggacgagaatgacgaacaaccatacaagaaaaggaaagta
tctattgcagaacgattggaatctctaatatgcaaagtgggagaaaagagtcttttctct
ttggaaagtagaatagaaggcttggctggagttttggaggcagatataccaaactacaaa
agcaaaatactgaaactcctttgcacagttgcacgtctattaccacagaagatgactatt
tacacaactctcgttggcttgctgaatgccagaaactacaattttggtggagagtttgta
gaagcgatgatacgtcaactgaaagaatgtttgaaagccaatctgtacaatgaagctgtc
tgtttagtgcgctttctttctgatcttgtgaattgtcatgtaatagctgcaccctcaatg
gtagccatgtttgaaaatttcgttaatgtgacacaggaggaagatgtacctcaggtgcga
tgtgactggtacgtgtatgcgtttctgtcatccttaccttgggtggggaaggagctctat
gagaagaaggatactgaaatggagcagatcttgtccactgttgaaacctatctgaaacgg
cgtcagaagactcatgtgcccatgctacaagtttggtctgctgataaaccacatcctcaa
gaagagtacttagattgcctttgggctcagattcagaaaatgaagaaggaccactggcaa
gagaggcacatcccgaggccctacctggctttcgacagcgtgctttgtgaagcgctgcag
cacaacctgcctccttttatagccccaccccacacagctgattccgtttacccgatgcca
agagtcaccttccggatgtttgactacactgatgatcctgaaggaccagttatgcctggg
agccactctgttgaaagatttgtgattgaagaaaacctccactgcatcatcagatcattt
tggaaagagagaaagacatgtgctgcccaattaacaagctatccaggaaacaacaagatc
cctctgaattaccacattgttgaggtaatttttgctgagttgtttcagcttcctgttccg
cctcacaccgaaatcatgtacacaacgctttttattgaactctgtaaacttcagcccgga
tctttacctcaagttcttgcacaagctacggaaatgctgtacatgcgcttagatacaatg
aatactatctgcatagatcggtttattaattggttttcgcaccatcttagtaattttgag
ttccgttggagctgggaagattggtcagattcagtttctgaggatcttgacagaccgagg
cctaagtttgtaagagaagtactggaaaaatgcatgaggctttcctaccatcagcgaata
atagatatcgttcctgctagtttttccgttctcactcctgcaaatccaacatgtatttat
aaatatggagacgaaagtaacaaatctcttcctggatataacgttgcactctgtttaagc
attgccattaaaaacaaagcaagtaatgatgaaatcttcaccattctgaaggatgtgccc
aatcttaatcaggaagaagacgatgatgaaggcttctcattcaatcctttaaaaatagag
gtttttgtccagacactattgcatttagcctcaaagtcattcagtcactctttcagcgct
ctgggaaaatttcgagaagccctcagaactttggctgaaagtgatgaagggaagcttcac
gttcttagagtgatgtatgaagtatggaagaatcatcctcagatgattgctgtactggtg
gataagatgattcgaacacagattgtggattgtgctgcagtggcaaactggattttttct
ccagagctatctcatgattttacaagattttatatttgggagatcttacactctaccatt
cgtaagatgaacaagcatgtgatgatgatccaaaaggagctagaagaagccaaagaaaga
ttagccaagcaacagaaaagacgtgatgattctcgaaggaatgagagggaaaattggccc
attgaagaacagatcgaacgcttgcaagaaaaagttgaatcagctcaaagtgaacaaaaa
aaccttttccttgtaatattccagcgttttattatgatcctaacagagcatctagtacga
tgtgaaacaggagggattgatgtaattacaccttggtacaagaactgtatagagaggctg
cagcaaatcttcctacagcatcatcagatcatccaacagtacatggtgaccttggagaac
cttctatttacagcagaattggatcatcacatactggctgtatttcagcagttctgtgca
ctccaggcctga
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