Pituophis catenifer annectens (San Diego gophersnake): 139313123
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Entry
139313123 CDS
T11059
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139313123 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139313123 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
pcae03016
]
139313123 (ZCCHC7)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
139313123 (ZCCHC7)
Transfer RNA biogenesis [BR:
pcae03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
139313123 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
139313123
NCBI-ProteinID:
XP_070794609
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MLFSGYGDAEAFEDDPYSEGSSSETSIDSEVEFHLYSQVHYAQDLGDVGENNNKDVKGQE
EFKSLKKEKSENEQDQRNNLIVISDSVSSDSSDVIILSDTLEEDSIYESKLQKLTTSVSP
TLRKLNKTAYSRAKKSIEHPSRPILKSEDQATVNSSKAKKANEKAILNNQDDVHMIHRVL
VTEDSSSSDDAVDVSSISSESDNVESWMLLGSAADDKDDDILLNLEGCRTSASGGEDRTG
WTISDKDLQAQIGNYVSVRHNNRYYTADKNVTCRNCDKRGHLSKNCPAPKKIPPCCLCAQ
RGHLQNSCPARFCLNCCLPGHCSRECPERMYWKKHCNRCDMRGHYADACPEIWRQYHLTT
RPGPLKTADSYSVQPASAYCYNCGVKGHYGFECLEKRMFGGTFPTFPFIYYYDNEYDIKR
SLQRAKKKVQELQDAGLLPKSPKRLHIDYDREEHKRKKKREVWKEHGKRGDHKNLRKKSH
ADLVKERKRKKEVQNNYMIEECFPRGGNVNAHKRCRRKTPYHQSGGFLADGKTENHRVSV
ESAKKRKRKKKQRSHSNNSCTRDESLFLIKQKKKKMTPKASLI
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgttattcagtgggtatggcgatgcagaagcatttgaagatgatccttattctgaaggg
tcttccagtgaaacaagcattgatagtgaagtagaatttcatctttacagtcaagtccat
tatgcacaagaccttggggatgtcggtgaaaataacaataaggatgtcaaaggacaagaa
gaatttaagtccttgaagaaagagaaatcagagaatgaacaagatcagagaaataactta
attgtcatttcagatagtgtcagttcagatagctcagatgtcataatattgtctgatacc
cttgaggaagatagcatttatgaaagtaaactccagaaactaacaacatcagtgtctcca
acattacgtaaattaaataagactgcttactctcgtgccaaaaaatctattgaacaccct
tcccggcctatcctgaaatctgaggatcaggctacggtaaattcaagtaaagcaaaaaag
gctaatgaaaaggcaatcttaaataaccaggatgatgttcacatgattcatagagtttta
gtaactgaggacagctccagcagcgatgatgcagttgatgtgtcaagtatatcctctgaa
agtgataatgtggagagctggatgctgctgggaagtgccgcagatgacaaagatgatgat
atcctgttaaatcttgaaggctgtagaacttcagccagtggaggagaagatagaacagga
tggaccatcagtgataaagacttacaggcacagattggtaattatgtttcagtgcgacat
aacaacagatactacacagcggacaaaaacgtcacttgcagaaattgtgataaacgaggt
catttatcaaaaaattgccctgccccaaagaaaattccaccctgttgtctatgtgcacag
agaggtcacctgcaaaacagctgtccagcacgattttgtttaaattgttgtttgccagga
cactgctctagagagtgccctgagagaatgtactggaaaaaacattgcaaccgctgtgat
atgagaggtcattatgcagatgcttgcccagaaatatggaggcagtatcacctaacaact
agaccaggaccactcaagacggctgactcttattctgtgcaacctgcttcagcatactgt
tacaactgtggagtgaaaggccactatggatttgaatgcttggagaagcgaatgtttgga
ggaacatttcctactttcccctttatctattactatgacaatgaatatgacatcaagagg
agccttcagagagcaaagaaaaaagtgcaagaacttcaggacgctggccttctaccaaag
tctccaaaaagactacatatagattatgatcgagaagagcacaaacgtaagaaaaagagg
gaagtttggaaggaacatggcaagaggggagatcataagaacctaaggaaaaagtctcat
gcagatctagtgaaagaaaggaagcgtaagaaggaagttcagaacaactatatgatagaa
gagtgctttcctagaggtggcaacgtgaatgcacataagaggtgcagaaggaaaactcct
tatcatcaaagtgggggctttctggcagatggcaaaactgaaaatcaccgagtttctgtg
gagtcagccaaaaagcggaagagaaagaaaaagcagaggagccactcaaacaatagttgc
accagggatgaaagtttatttcttatcaaacagaagaaaaagaaaatgacaccgaaagcc
agcttgatctga
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