Pituophis catenifer annectens (San Diego gophersnake): 139313124
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Entry
139313124 CDS
T11059
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139313124 (RNF38)
Enzymes [BR:
pcae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139313124 (RNF38)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139313124 (RNF38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf-C3H2C3
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
139313124
NCBI-ProteinID:
XP_070794610
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MPVAANSPPRTVQQPDSRPFSASARLRDRDPAKPHHHHPGAVGADERQEPQRHGQAGGEA
AGRTGGSGGGRAAAPSGAPSPPSLLAFLPPSPPLRPAGGPSPPPEPPRTRSRSRSGFFSL
LAMNGGTTATAAAAAAHFQPPPPAPPHLHGPSLPELGARSQGRGSPAGHGHPRAPPGARP
PAPGGIGASFQCQLIHQDHICTDDSDKSEDSPSPKRQRLSHSVFDYATASPAPSPPMRPW
EMTSNRQPPSARPSQHHFSGERCNTPARNRRSPPVRRQRARRDRLSRHNSISQDENYHLP
YGQQQAIEEPRAFHPPNVSPRMLHPAAHPPQQNAVMVDIHEQIHQGTVPVSYTVTTVAPH
GIPLCTGQHIPACNTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLIS
SDPFLLHPPHLSPHHAPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGDHLPVGGFTTYP
PSAHPPTLPPSAPLQFLAHDPLHQEMSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPS
LLPYVLSMLPVPPAVGPAFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLP
SYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA
SEVHRDSE
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggccgccaattcgccaccccgcacggtgcagcagcccgactcccgccccttc
tctgcctccgcccgcctccgggaccgggaccccgccaagccccaccaccaccacccaggg
gccgtcggcgccgacgagcgccaggagccccagcgtcacggccaggccggcggggaagcg
gcggggcggacgggcggtagtggtggcggcagagcggcggctccttccggcgccccttcg
ccaccctctttgctcgccttcttgccgccctcgccgccgctacgtcccgctgggggccct
tcgccgccgccggagcccccccggactcgctcccgttctcgctccggattcttcagcctc
ctcgccatgaacggcggcaccacagctacagccgccgccgccgccgcgcacttccagcct
ccgccgcctgccccaccgcatctccatgggccgagcctgcccgagttaggcgcccgcagc
caaggcaggggcagccccgctggacacgggcaccctcgagccccgccgggtgcccggccg
cccgcaccaggtggtataggtgcttccttccagtgccagctgatccatcaagaccacatc
tgtactgatgacagtgacaagagcgaagatagtccaagtcccaagagacagcgcctttct
cattcagtctttgactacgcaacagcatcaccagctccatcaccaccaatgcgaccatgg
gagatgacatcaaataggcagcctccttcagctcgaccaagccaacatcacttctcaggg
gaacgatgcaacacacctgcgcgcaacagaaggagccctcctgttagacgccagagagca
agaagagatcgactgtctcgacataattccattagtcaagatgaaaactaccatcttcct
tatggacagcaacaagcaatagaagaaccacgagcctttcacccaccaaatgtgtctccc
cgtatgttgcacccagctgctcatccgccacagcagaatgcagtcatggttgacatccat
gaacagattcaccagggcacggtccccgtttcatatacagtgaccacagtagccccacat
gggatcccactttgcacaggccagcacataccagcttgcaatacgcagcaggtcccaggg
tgttctgtggttttcagtgggcagcaccttcctgtctgcagtgtgcctcctccaatgctt
caagcttgttctgttcaacatttgccggttccatatgcagctttcccacccctcatttct
agtgatccatttctcttacatcctccacacctctccccacaccatgctccacatttgcca
cctccaggccagtttgttccttttcagacacagcaatcgcggtcgcctctccaaaggata
gaaaatgaagtagagttacttggagatcatcttcccgtaggaggttttaccacctatcca
ccttcagcccatccaccaacattgcctccctcagctccccttcagttcctagcgcatgac
cctttacatcaagagatgtcatttggagtaccttatccaccctttatgcctcgaagactc
acagggcgcagtcgataccgatctcagcaaccaattccacctcccccttaccatcccagc
ctattgccatatgtgctatcaatgcttcctgtgccgcctgctgttgggccagccttcagt
tttgagctggatgtagaagatggtgaagtagaaaactatgaggcactgctgaacttggca
gaaagactaggtgaggccaaaccaaggggattgacaaaagcagatattgaacaacttccg
tcttataggttcaacccaaataaccatcagtcagaacagactttgtgtgtagtatgcatg
tgtgactttgagtcaaggcaactgcttagagttttaccatgtaaccatgagttccatgcc
aagtgtgtcgacaaatggcttaaggcaaatcgtacctgccctatctgcagagctgatgct
tcagaagtgcatcgtgattcagaatga
DBGET
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