Pituophis catenifer annectens (San Diego gophersnake): 139313183
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Entry
139313183 CDS
T11059
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139313183 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcae03021
]
139313183 (SMARCA2)
03036 Chromosome and associated proteins [BR:
pcae03036
]
139313183 (SMARCA2)
Transcription machinery [BR:
pcae03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139313183 (SMARCA2)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
139313183 (SMARCA2)
Chromatin remodeling factors
BAF complex
139313183 (SMARCA2)
PBAF complex
139313183 (SMARCA2)
GBAF(ncBAF) complex
139313183 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
139313183
NCBI-ProteinID:
XP_070794725
LinkDB
All DBs
Position
Unknown
AA seq
1626 aa
AA seq
DB search
MSTPTDPSTMPHPGPSPGPGPSPGPILGPSPGPGPSPSSVHSMMGPSPGPPSVPHPMPSM
GPGDYSQEGMHQMHKPIDGLHEKGIVEDLHNSSMKAANMRPPLPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMQPSQPGPMMPVDPQVMSQPSRGPSPFSPVQLH
QLRAQILAYKMLARGQPIPENIQLAVQGKRSLPGIQQQQALYKPSGVVPMPGHGVASGMP
GHTAAMAPKTWPEGQGVDINVSNTPQKLAVPPPSGRPSPAPAATQPTAVMPGPSVPQPAA
GQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDL
RTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKL
EKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQK
KETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQA
AKEKKKRRRRKKKVEDNMEGIGSGLGPDGELIDESSQMSDLPVKVTHTETGKVLLGPEAP
KASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEDEDEDESSRQELDEKIHLDPNTEDVSE
KDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAIAERVDKQSSLLINGTLKHYQVQG
LEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMDHKRLNGPYLIIVPLSTLSNWTYE
FDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVD
EGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQ
WFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMS
ALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAE
HLGYSSGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNF
AYLRLDGTTKSEDRATLLKKFNEPNSQYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPH
QDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSH
ERRAFLQAILEHEEENEAKAQPTATGRTPRGRARLSADQSRLAAQTPRGSPHPTPQEVKS
PIVPEGGSITTNDDEESDPNDPMEEDEVPDDETLNQMIARNEEEFDLFMRMDLDRRREDA
RNPKRKPRLMEEDDLPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQW
LRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLTK
QMNAIIDTVINYKDSSGRQLSEVFIQLPSRKEYPEYYELIRKPVDFKKIKERIRNHKYRS
LSDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKLAKEDESEEDSNEEDEDE
EDESESESKSVKVKIKLNKKEDKNRDKGKGKKRQVRVKAKPVVSDDDTDEDQDENDQSEV
SGSDDE
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaccaactgatccttctacaatgcctcatccaggcccttcaccagggccaggg
ccatctccaggacctatcctaggtcccagcccaggacctgggccatcaccaagctcagta
catagcatgatgggaccaagtcctggacctccaagtgtaccacatccaatgccatctatg
ggaccgggtgattattcacaggaaggcatgcaccaaatgcacaaacctattgatggtttg
catgaaaaagggatagttgaagacctacacaacagctccatgaaggctgcaaacatgcga
ccacctcttcctggcatgggaccacctcagagtccaatggatcaacacagtcaaggctat
atgtctccgcatccgtctcccctgggagcacctgagcacgtgtctagtccaatgtctgga
ggaggtccaactccaccccaaatgcaaccgagccagccaggacccatgatgcctgtggac
ccacaagtgatgagtcaacccagtagaggcccttcacctttcagtcctgttcaattgcat
cagctccgagctcagattttagcatacaaaatgctggctagaggacagccaattcctgaa
aacattcagcttgctgtacaaggaaaaaggtcactgcctgggattcagcagcaacaggct
ctttacaaaccatctggagttgttcccatgcctggacacggagttgcttcaggaatgcca
ggacatacagctgccatggctccaaaaacttggccagaagggcaaggagtggatataaat
gtctcaaatacaccccaaaagttggctgttcctcctccaagtggaagaccatcacctgcc
cctgctgctacccaacccacagctgtaatgccaggtccttctgtaccacagcctgcagct
ggtcagccttcgcctattgttcagctgcagcaaaaacagaaccgtatcagccccatccaa
aagcctcaggggctggatcctgttgaaattcttcaggaacgggaatataggcttcaggct
cgaattgcacacagaattcaagaattagaaaatttgcctggttctttacctccagatctg
aggactaaagccacagtggagttgaaagcgcttaggctactgaatttccagcgccagctg
cgacaagaagtagtggcatgcatgcgtcgggacacaactttggagactgctctgaactct
aaggcatacaaacggagcaagcggcagaccctgagggaagcccgaatgaccgagaaactt
gagaaacaacagaaaatagagcaggagagaaaacgtagacagaagcaccaggaatatctc
aatagcattttacagcatgctaaagattttaaagaataccatcggtcagtggctggaaaa
attcagaagctttccaaagctgtggctacttggcatgccaacacagaacgggaacagaag
aaagaaacagagaggattgagaaagaacgaatgagaaggctgatggctgaagatgaagaa
ggctatcgcaaactcattgatcagaaaaaagacagacgtctagcctatctgctgcagcaa
actgatgaatatgtggccaatctgacaaatttggtgtgggaacacaagcaagcacaagct
gccaaagaaaaaaagaagaggagaagaagaaagaagaaggtagaagacaacatggaagga
ataggatctggacttggtcctgatggagaactcatagatgagagcagtcagatgagcgat
ctcccggtcaaggtaactcatacagaaacaggcaaagttctccttggaccagaagctcct
aaagcaagtcaattggatgcttggttagaaatgaacccaggctatgaagttgctcccagg
tcagacagtgaagatgaaagtggctcagaatatgaagaagatgaagatgaagatgaatca
agtagacaagaattagatgaaaagatacatctggatcccaacactgaagatgtttcagaa
aaagacgctaagcaaatcatcgagacagccaaacaagatgtggatgacgaatacagcatg
cagtacagtgcaagaggctctcagtcttactatacagtggctcatgcaatcgctgagaga
gtggataagcagtcctctcttcttatcaacggcaccctgaaacattaccaggtccagggc
ctggaatggatggtttccttgtataataacaatttaaatggaattttagctgacgaaatg
gggctaggaaagaccatacagacgatagcactcatcacttacctgatggatcacaaaagg
cttaatggaccctatctcatcattgttcccctctcgactttatccaactggacatatgaa
tttgacaaatgggccccttctgtggtgaaaatttcttacaagggtacacctgctatgcgt
cgatcgcttgtacctcagctacgtagtgggaaatttaacgttcttttgactacatatgaa
tacatcataaaggacaaacacattcttgctaagattcgatggaaatatatgattgtagat
gaaggtcatcgaatgaagaaccatcactgtaagctgactcaggtgctaaatactcattat
gtggcaccaagaaggattctcttgactggaacgccattgcagaacaaattacctgaactt
tgggctctccttaattttctcctcccaacaattttcaagagttgcagcacttttgaacaa
tggttcaatgctccttttgccatgactggagaaagggtggatttaaatgaggaggaaact
attctgattattcggcgtctccataaagtgctaagacctttcttgttaagaaggttgaag
aaagaggttgaatctcagttaccagaaaaggttgaatacgtgataaagtgtgatatgtca
gccctgcagaagattttgtatcgccacatgcaagccaagggaatcctccttactgatggc
tcggagaaagacaagaagggaaaaggtggagccaaaacactcatgaataccatcatgcag
ctgaggaaaatatgcaatcacccatatatgttccaacatattgaggaatcctttgctgaa
catttgggttattccagtggtgttatcaatggagctgagctttatcgggcttctggaaag
tttgagctacttgatcgaattctaccaaagttgcgagccactaatcatcgtgtgcttctt
ttctgtcaaatgacatcccttatgactattatggaagattactttgcctttcgaaacttt
gcttacttgcgacttgatggaacaacaaagtcagaagatcgagcaactctgctgaagaaa
ttcaatgagcccaattcccaatactttatttttctgctgagcacaagagcaggaggtctg
ggtttgaaccttcaggcagctgatactgttataatttttgacagtgattggaatcctcac
caggatttgcaagcacaagacagagctcatcgaatcgggcagcagaacgaagttcgagtc
ttacgattgtgcacagtgaacagtgtcgaggagaaaatcttggcagccgcaaaatataaa
ctgaatgtggatcagaaggttattcaggctggcatgtttgaccaaaaatcttcaagccat
gaacgaagagcttttctccaagccatattggaacatgaagaagaaaatgaggccaaggca
cagccgacagcaacgggccgcacaccgaggggccgagctcgtttaagcgcagaccaatcc
cgcttagccgctcaaaccccacgtggcagcccacatcctactccacaggaggtgaagagt
cccatcgtaccggaaggagggtccataaccacgaatgatgatgaagaaagcgacccaaat
gaccccatggaagaagatgaagttcctgatgatgagactctgaatcagatgattgcacga
aatgaagaggaattcgatcttttcatgcgaatggacctggataggcgtagggaggatgct
cgaaacccaaaacgcaaaccgcgcttgatggaggaagacgatttgccatcttggatcatc
aaagacgatgctgaagtggaaagacttacatgcgaagaggaggaggaaaaaatatttggg
agagggtcccgtcagcgtcgggatgtggactacagtgatgctttgacagagaaacagtgg
ttaagggcaattgaagacggcaatttggaagaaatggaagaggaggttcggcttaaaaaa
cgtaaaaggagaagaaatgtggacaaggattcaggcaaagaagacggtgagaaggcaaaa
aagaggagaggaaggcctccagctgaaaaattgtcacccaatccacctaaactgacaaag
caaatgaatgccataattgataccgtgatcaactataaggacagttcaggacggcagtta
agtgaagtcttcattcagctgccttctcgaaaagaatacccagaatattatgagttaatt
agaaaaccagtggacttcaaaaaaattaaggaaagaattcgtaatcataaatatcggagt
ctcagtgacttggagaaggatgtcatgttgttgtgtcacaatgcccagaccttcaactta
gaaggatcacagatctatgaggactccattgttcttcagtccgtcttcaaaagtgcacgg
cagaagcttgccaaagaagatgaaagcgaggaagacagcaacgaggaagacgaagatgag
gaagacgagtcagaatctgaatcaaaatctgtgaaagtgaaaattaagctaaacaagaaa
gaggacaaaaaccgagataaagggaaaggcaagaaacgccaggttcgggtcaaagccaaa
ccggttgtgagtgatgatgatactgatgaggatcaagatgaaaatgaccagtcggaagta
agtggaagtgacgacgagtga
DBGET
integrated database retrieval system
