Pituophis catenifer annectens (San Diego gophersnake): 139313188
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Entry
139313188 CDS
T11059
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcae03400
]
139313188 (SMC5)
DNA repair and recombination proteins [BR:
pcae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
139313188 (SMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_13
AAA_29
TMF_TATA_bd
GCN5L1
Transformer
DUF2563
AAA_25
DUF6193
Motif
Other DBs
NCBI-GeneID:
139313188
NCBI-ProteinID:
XP_070794733
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MAASAKRKSDDTEAAGSSDGRTRSNKRTSRESQSRSGDRRSASPTFVEGAIVRISMENFL
TYDNCVVLPGPHLNMIVGANGTGKSSIVCAICLGLAGKPSFIGRAEKVGHYVKRGCNKGT
VEIEVYKMPNNVVITREMSVSNNQSTWFLNKIPCTLKMVEEQVSALNIQVGNLCQFLPQD
KVGEFAKLSKIELLEATEKSIGPPEMYKFHCDLKNFRQRERELENSCTEKNSNLEKMKQK
NERYKQDVERYHERQHHLDSIAMLEKKRPWVIYEETRKLYEEAKKARDRQKEELKTLRQT
QAPMIHEMREADKQCAKLEDKIKEKIAAIKETSQKCKQQQDALEKKDKQIQDIKQALRMK
QEAETDRQKRIQNTRKMIEDWTNELKNTENAENIQPLMNSLNANLRQLEEEKANIDGELN
DLRRERENLLKERKGIADRIAQFENLMNIKEEKLKGRFQDTHDALMWLRQNRDRFKRSVC
DPVLLSINMKDNKHAKYVENHISANDMKAFVFELKEDMEIFLKEMRDNRKLRVNAVCAPS
ESFAEKRPSKPIEELYRYGFFSYLRELFDAPLPVMNYLCHQYYIYEVPVGTEKTRNMIER
VIKETKLRQIYTAEEKYTVKISRYTNQSVSTNISLRPAQYLTVTVDADKRRQLEDKKNEI
NKQLQSLDAQMALLSEKQKHLECKDNQLRQQKKELLERKNKRKQLESKINMKCDSLRQME
QDGINLEEESEQANAKIKKLNTQKVKLVIDFMQLIKSCMALNEDKTNLMLENTVATFHKS
RLDAEYRAATVHLRAMDQQISDLDVKKNSLLTKCKGLLSTAKRVCNLGMDQNLPEGVYKA
FMDLPSTVDEIDALLNEEKTRASCFTGLNASVVEEYNKRVKEIAQMTAELEEKKKELDTY
RRNISQVKERWLNPLKKMVDQINEKFSSFFSSMQCAGEIDLHAENEEEYDKYGIRIRVKF
RSSTQLHELTPYHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFDVV
VETACKKSTSQYFFITPKLLQNLSYGEKMTILLVYNGSSMLESCKWDSKAFFRRRRRFQP
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctctgccaagcgtaaatctgatgatactgaggcggcggggagcagcgacggc
aggactcgctctaataaacgaacctcgagggaaagccagtcgcgatcgggcgatcgacga
agcgcgagtccaacgttcgtcgagggcgctatcgtgagaatctccatggaaaacttctta
acctatgataactgtgtggtgttgccaggccctcatctaaatatgatagtgggagctaat
gggacaggtaaatcaagcattgtatgtgcaatatgccttggattggcaggaaaaccttcc
tttataggacgagctgagaaggttggtcattatgtgaagagaggttgcaataaaggaaca
gttgaaattgaggtgtataagatgccgaacaatgttgttatcacacgagaaatgtctgta
tcaaacaatcagtcaacttggtttcttaataaaatcccctgcactctgaaaatggtggag
gaacaagtctctgctttaaatattcaagtgggcaatctatgccagtttcttccacaggat
aaagttggagaatttgcaaaattgtccaaaattgagttacttgaagctacagagaaatcc
attggtccaccagagatgtacaaatttcactgtgatcttaaaaacttcaggcagagggag
cgagaacttgaaaattcatgcacggaaaaaaatagcaatctagaaaaaatgaagcaaaag
aatgaaagatataagcaagatgtggagcgatatcatgaacgtcagcaccatctagattca
attgcaatgctggagaaaaaaaggccatgggtgatctatgaggaaacacggaagctgtat
gaagaggctaaaaaagcccgagatagacagaaagaagaattaaaaacattgagacagact
caggctcctatgattcatgagatgagagaagccgacaaacaatgtgcaaaactggaagac
aaaatcaaggaaaagatcgcagccatcaaagaaacatctcagaaatgtaaacagcaacag
gatgctttggagaaaaaagacaagcaaattcaagatattaaacaagctttaaggatgaaa
caagaggcagaaacagatcggcagaagagaatacaaaatactcgtaagatgatagaagac
tggaccaatgagcttaaaaacacagagaatgctgagaacattcagcctttaatgaattct
cttaatgccaaccttagacagttggaggaagagaaggcaaatattgatggtgaattaaat
gatctccgtagggaaagggagaacttgctaaaagaaagaaaaggtatagcagatcgcatt
gctcaatttgaaaatctgatgaatataaaggaagagaagctgaaagggagattccaagat
acacacgatgctcttatgtggctaagacagaatagagaccgatttaaaagaagcgtctgt
gaccctgtgttgctttctatcaatatgaaagataataaacacgctaaatatgtagaaaat
cacatttctgctaatgacatgaaggcctttgtctttgaattgaaggaagatatggaaata
tttttaaaagagatgcgggataatcgcaaactaagagtgaatgctgtatgtgcacctagt
gaatcatttgctgaaaaaagaccttcaaaaccaattgaagaactgtaccgatacggattt
ttctcttacttaagggagttattcgatgctcccctccctgtgatgaattatctgtgtcat
cagtattatatttatgaggttcctgttggaacagagaagactaggaatatgattgaaagg
gtaataaaggaaacaaaacttaggcaaatctacacagcagaagaaaagtacacagtaaaa
atatcccgttacacaaatcagtctgtttccacgaacatatcactgaggccagcacagtat
cttactgttacagtggatgcagataaaagaagacagttagaagacaaaaagaatgaaatt
aacaagcaattgcaatcattggatgctcaaatggcattactctctgagaagcagaaacac
ctggaatgcaaagacaatcaactccgtcaacagaaaaaggaactcttggaacgaaaaaat
aaaaggaagcaattagaatcaaaaattaatatgaaatgtgatagtttaagacagatggaa
caagacggcatcaatctggaagaagaatctgagcaagcaaatgctaaaattaagaaactt
aacactcagaaagtaaaacttgtaattgattttatgcaattaataaagagttgtatggcc
cttaatgaagacaaaacaaacttgatgctagagaacacagtagctacttttcacaagagc
agacttgatgctgaatatagagctgcaactgtacacctacgagctatggatcaacaaatt
tctgacctggatgtaaagaagaattctcttttaacgaagtgtaaaggtttactgagcact
gctaaaagagtttgcaaccttggtatggatcaaaaccttccagaaggtgtctacaaggca
ttcatggaccttccaagtacagtggatgaaattgatgctctgctgaatgaggagaaaaca
agagcttcatgtttcacaggcctcaatgcttcagttgttgaagagtataataaaagagtt
aaagaaatagcacagatgacagcagaactggaggaaaagaaaaaggaactggacacctat
agacgaaatatttcacaggttaaggaaaggtggctgaaccctttgaaaaagatggttgac
caaataaatgaaaagttcagcagcttttttagctctatgcaatgtgcaggggagatagat
cttcatgcagaaaatgaggaggaatatgacaagtacgggattcggattagggtcaaattc
cgtagcagcacgcaacttcatgagttgactccctaccatcagagtggaggagaaagaagc
gtttccacaatgttgtatttaatggctttgcaagaactcaacagatgccctttcagagtc
gttgatgaaataaatcagggaatggatccagttaatgaaaggagagtctttgatgtggta
gtagaaactgcctgcaaaaagagcacttcacaatacttctttattacaccaaagctgttg
cagaatctcagttatggagaaaaaatgacgatattattggtctacaatggatcatctatg
ctagaatcatgcaagtgggactcaaaagctttctttaggaggaggcggagatttcaacca
tga
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