Pituophis catenifer annectens (San Diego gophersnake): 139313229
Help
Entry
139313229 CDS
T11059
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139313229 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139313229 (DMXL1)
Membrane trafficking [BR:
pcae04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139313229 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
139313229 (DMXL1)
RAVE complex
139313229 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_2nd
Beta-prop_Vps41
MIOS_WD40
Beta-prop_VPS8
NmU-R2_C_term
Motif
Other DBs
NCBI-GeneID:
139313229
NCBI-ProteinID:
XP_070794815
LinkDB
All DBs
Position
Unknown
AA seq
3024 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGNVDGHPFTAYASGCDIVILGTDFERLQIIPGAKYGNIQV
GCVDCSMQQGKIAAAYGNIICIFEPVKHLKRKKNHNYGLSYQWQNSDQICLEHVVHNLTW
DPTGSRLLTSSSCLQLWSNVSFENLSEDENREKADTQNWRIIWQSKTASQVHLMMFSPDG
EFFATAGKDDCLVKVWYNTDCWKSVIASQHTTPETTVQELSFSFIYLVHPRSVDGFSWRK
TSNYMPRGAVCNVLLTCCKDNICRLWAETLLPNDSLLYEGGYNHWPEPVKLNNFKRNASS
KESMKNALELNLRPFRRGRRRSIALAHTGYLPHQQDPHVVHRNSPLQSNALCHFHIAASI
NPATDIPLLPSIMSLSLNESEEKSGPFVVHWLNNKELHFTLSMEVFLQQFKRNFEHISSE
ASTEEPNQMTFKSDEETDDSREEQRRNQEQKEFPGLNSNSIPLSSAVIDHEIEIQLAEWN
KNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDANSLCRSIV
MYACTKNVDLALQQGKQKPSSLGRSCSMLISSGHSKSPNNVKLSIFTPNVMMISKHADGS
LNQWLVSFAEESAFSNVLSICHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNAVRIPVLD
STEEASPKYQNKSSACTSQDLTAVYSELILWRVDPVGPLSFSGGVSELARINSLHVSAFS
NVAWLPCLIPSYCLGAYCNSPSACFVASDGQHLRLYQAIIDAKKLLCELSNPGISKYVGK
FFNIISQQSTARPGCIVELNSITELHGEKMQLLHVFQEDFIMNNNENRFSEKESILLDPG
YQENGFSEKFYLIVIEYTQNCSLLHMWKLHLKSLPVSVDEKIAPKASETASQEQLHSSPD
QEKLHSSFTKKYQVCRDNLQSTSQLVLSSEIVYSRELNLPEGVEIVSIKPSAGHLSSSSI
YPVHQAPYLLATLCSDGKVRFWRCRMAQETDELSKPENTKNSGTYVWEEWPLLIEDGHLS
SSALEVSGLSLEISCAHTNRLAVAYKRTPPQNSNSQDFFVNVGIFECESTGSSCWNLEQT
LHLDELNLTLDSLNVNSSSMALGNKNLTFRTKHLVHLDWMSREDGSHILTVGIGSKLYMF
GQLAGKIQEQSAKEMLVLPVWENAKTACTSRFILLRCVDLVSSVEGSPPLPVSLSWVRDG
ILVVGMDCEMHVYSQWQPFSKQDPITAESYSGSTPSITSLVKQSQSGVPPLKRTLTRSMA
SFAQKLGGKRTIFDLSLEMEDSGLFEAAHSLCPTLPQYHPVQLLELMDLGKVRRAKAILS
HLVKCIAGEVIALSDPCHEKRYRSLSICASGSSTRDPMTFNRCVITDYTEIDSVPPLPLY
ALLAADEEYSYACTEKSNTPKNLNKHVTDENYEDLFQNSSLYTDELTTIEVDEDDKKPKV
IDLSQYNPTYFGQEHAQVLSRHLLHSSLPGLTRMEQMLLMALADTIAITSTDIGESRDRS
KGGETLDECGLKFLLAVRLHTFMTTSLPPAHRAQLLYQGLSSSHFAWAFHSIAEEELLNM
LPAVQKGDPTWSELRAMGIGWWVRNTHNLRRCIEKVAKAAFQRNNDPLDAAIFYLAMKKK
TVIWGLYRSLKDTKMTQFFGNNFTEDRWRKAALKNAFSLLGKQRFEHSTAFFLLAGHLKD
AIEVCLEKLNDIQLALVIARLYESEFETSGTYKSILQKRILGSKPRSTESPLKPHFDPFL
RSMAYWILEEYGHALDTLLSHPTLNDEDEGSFSNCSPSVFNFYNYLRTHPLLLRRHFGSS
DLSSTRICVTGENGLADEINLEERKLFFTAAYTHLKSGCPMLALEVLSKMPKVVKKSKSL
RRTLSLRNTSKECSPSSPMPVESKDDQFFRTNRSEPVLNGLGSLSDASPDRHSDSDALFD
WNQPAAVLQDDPLELKWDSYKDEESEDSCLVMKPLQKITGEKTNEVSSSCTETYSSGGEN
DVLVSSEDIICVQLKFRACLKILTEELRTLSTGYEVDGGKLRYQLYNWLEREVVALQKTC
EYNIEADDSQREIIPVMGENSLSERAEDLSDIQLKENIQRRHWLIKYQSLLRMFLSYCIL
HGSHGGGLASVRMELILLLQESQQEFSEQSYSNIVSEQSTIPLLFACTASAKTVVANPLL
HLSNLTHDILHAIISLDSPPHPEVQNNKIQVMHTLAASLSACIYQSLCGGHNYSLLQANQ
FTGMIYQTLLLSHRHSLRTASSDETVTPNTTPAQWPGIMDLIQLLNQAGEEAQSGITVLL
CEILTAIYLSLFIHGLATHSSNELFRIVAHPLNDKMWFAVFGGGAKIPKKGPIQETTKMA
SSPIDDGEKQNKRFRLTSKSSSKENSPTILPGKEQDFSIYKEKFIPPELSIWDYFIAKPY
LGSSQTRFEYDSEESQDSSDEDEDEDGAFLSDSKLQEHSNSNSFSWSLMRLAMVQLVLRN
LKSFYPLAGHDLTELPVCSPLCHAVLKALQRWEQVLLRRLEMHGGPPENFISIHILQDAS
SSGPALLRHKALLEPTNTPFKSKSHYALSVKRLWQYLVKQEMVQETFIRNIFAKRKCLNE
SLEDQAEFTKTSSGEESGINKIEHDAGSPGSKARIIHKESDIITAFAVNKANRNCIAIAS
SHEIQELDVSGILATQIYTWVDEDIEVEAKGADDFLVIHARDDLGNIQGTTPYTHSTPGT
PINMPWLGSTQTGRGAAMEYSNKFNGIRKELARKEMIKKNLNNVRRMASHPTLPYYLTGA
QDGSVRMFEWGHSQQLACFRSGGNSRITRMRFNYQGNKFGIVDGDGHISLYQTNCKGCLH
NGSTPKPYLTWQCHNKTASDFVFISSSSLIATAGLSTDNRNICLWDTLVAPSSSLVHAFT
CHDTGATVLAYAPKHQLLISGGRKGYTCLIDLRQKQQRQFFQSHDSPIKAIAVDPTEEYF
VTGSAEGNIKVWSLSNFSLLHTFLNEHSRQSIFRNLGTGVMQIETGPANHIFSCGADGTV
KMRILPDQFNSFGEVLKTDVKYVF
NT seq
9075 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcaccaagtgctaacgggggctgtcaaccccggggacaactgcttctccgtg
gggaacgtcgacggccaccctttcacggcttatgcatcaggatgtgacatagtgatattg
ggtacagattttgaaagattacaaataattcctggagcaaaatatggaaatatacaagtg
gggtgtgtagattgttccatgcagcaagggaagattgcagctgcttatggaaatataatt
tgcatctttgagccagtcaaacatctaaagcggaagaagaatcataattatggattatct
tatcaatggcagaattcagatcagatttgcttggaacatgttgtgcataatttaacctgg
gatcccacaggctctcgtctgttgactagttccagttgtttgcagctttggtctaatgtc
agttttgaaaatctgtcagaagatgaaaatcgtgaaaaagctgatactcagaactggaga
atcatatggcagagcaaaactgcttctcaagttcatctaatgatgttttcaccagatgga
gaattttttgctactgcagggaaggatgactgtcttgtaaaggtgtggtataatactgat
tgctggaaatcagtaattgcatcacaacatacaacaccagaaaccacagtgcaggaactc
agtttttcatttatttatctggttcatcctcggtctgttgatggtttttcatggcgaaag
acaagcaactacatgcctcgtggtgctgtgtgtaatgtactgctgacctgctgcaaagac
aatatatgccgcctctgggcagaaactctgttgcctaatgatagcctcttatatgaaggt
ggatataaccattggcctgagccagtgaaattaaataactttaagaggaatgcttctagc
aaagaaagcatgaaaaatgccttagagttaaatctaagacctttccgacgaggaagaaga
agatcaatagcacttgcacatactggatacttgccccatcagcaagaccctcatgtagtt
catcgaaacagcccattgcagtcaaatgcactttgccatttccacattgctgccagcatc
aatccagccacagacattcccttgctcccttctatcatgtctctgagtcttaatgaaagt
gaagaaaaaagtggtccttttgtagtgcactggctaaataataaagaattacattttact
ctatcaatggaggtttttttgcaacagtttaaaagaaattttgagcatatttcctcagaa
gccagcactgaagaacctaatcagatgactttcaaatctgatgaagaaactgatgacagt
agagaagaacagagaagaaatcaagaacagaaagaatttcctggtttaaattcaaactcc
attcccttgtcttcagctgttattgatcatgaaattgaaatacaactagctgaatggaat
aaaaatgcagacatgctatttagtattcatcctatggatggatcattgcttgtatggcat
gttgattggctagatgaataccaaccgggcatgtttcgtcaagtacaggtgtcgtttgtt
tcaaggattcctgttgcctttcctactggtgatgcaaattcactttgcagaagtatagtg
atgtatgcttgtacaaaaaatgttgaccttgctcttcagcaaggcaaacaaaaaccatct
agccttggtcgttcctgctctatgttaatttcttcaggtcatagcaaatcacccaacaat
gtaaaactaagcatcttcaccccaaatgttatgatgatttccaagcatgcagatggatct
ctaaaccagtggctagtcagctttgcggaggaatctgctttttcaaatgttctcagtatt
tgccacaaatcacgatactgtggacatcgtttccaccttaatgacttggcttgccattca
gtacttccattgctactcacaacctctcatcacaatgcagtgaggataccagttcttgat
agcacagaagaggcatctccaaaatatcaaaataaaagttctgcctgcacatctcaggat
cttactgctgtttatagtgaacttatcctctggagagttgatccagttggcccactgtct
ttttctggtggtgtttctgagcttgcaagaataaattctcttcacgtatctgctttttca
aatgtggcgtggttgccttgcctcatacctagttactgcttaggtgcgtactgtaattca
ccaagtgcttgctttgttgcgagtgatggacaacatttgagactctatcaagctataata
gatgccaaaaagctactctgtgaactgtcaaatccaggaatttctaaatacgttggcaaa
ttttttaacatcataagtcagcaatctacagctagaccgggttgcattgtagaactgaat
tctattacagagctgcatggtgagaaaatgcagctacttcatgtttttcaagaagatttc
attatgaataataatgagaatagattctcagaaaaagagtcaatactacttgatcctgga
tatcaggaaaatggattttctgaaaaattctatttaattgtaattgaatatactcaaaac
tgctcattgttacatatgtggaaattacatttgaaatccctaccagtctcagtggatgaa
aaaatagctcctaaggcatctgaaacagcatctcaagaacaactgcattcttctccggac
caagaaaagcttcacagttcctttacaaagaaataccaagtttgcagagataatcttcag
agtaccagccaattagttctttcttcagaaattgtctatagtcgagaactgaatttacca
gaaggagtggagatagtaagcattaagccatcagcaggtcacttaagttcttcttcaatt
tatccagtccaccaagctccttatcttcttgcaacactttgctcagatgggaaagttagg
ttttggaggtgtagaatggcacaagaaacagatgaattatcgaaaccagagaatactaag
aacagtggtacgtatgtatgggaagaatggccattgcttattgaagatggacatcttagt
agcagtgcccttgaagtgtctggtttatctcttgaaattagctgcgctcatacaaatcgt
ttagctgtggcatacaagcgaacaccaccccaaaacagtaattctcaagatttttttgtg
aatgtcggcatttttgaatgtgaatctacaggaagctcttgttggaacttggaacaaaca
cttcatttagatgaactaaacctaacattggattctctgaatgtcaatagtagttcaatg
gctttaggaaataagaacttaacattcagaacaaagcatttggttcatttagactggatg
tctagggaagatggctctcatatattaacagtaggcattggttcaaagctttatatgttt
ggtcagttggctgggaaaatacaggaacaaagtgctaaggaaatgcttgtactgccagta
tgggaaaatgctaaaaccgcttgtacatctagatttatactgttacgatgtgtggatttg
gtctcatcagtagaaggttcacctcctttaccagtttctttgtcttgggttcgtgatggt
atccttgtggttgggatggattgtgaaatgcatgtttattctcaatggcagccattttca
aagcaagatcccattactgcagaatcttacagtggtagtacaccatctataacaagttta
gttaaacaaagccagtctggtgttcccccgctaaagcgaacattaacccgatctatggct
agctttgctcaaaaacttggtgggaaacgaactatatttgatctgtcactggagatggaa
gattctggtctttttgaagcagctcattcattatgtcctactttacctcagtatcatcct
gtgcaacttttggaactcatggatctagggaaagtacgtagagcgaaggccattttatct
catctagtcaaatgcattgctggagaagttattgccttaagtgacccctgccatgagaaa
agatatcgctctctctcaatctgtgctagtgggagtagtacaagagaccctatgacattt
aacagatgtgtaataacagactatacagaaatagattctgttccaccgcttcctttgtat
gcattgcttgctgctgatgaagaatattcctatgcttgtactgaaaagtcaaatactcca
aagaaccttaacaaacatgtgactgatgaaaattatgaggatctatttcaaaattccagc
ctgtatacagatgaactgactacaattgaagtagatgaagatgacaaaaagccaaaagtt
attgatctttctcagtataatccaacttactttggacaagagcatgcccaagttctttct
cgtcacttgcttcattctagcttaccaggacttaccaggatggaacagatgctattgatg
gcattagctgatacaattgccattaccagtactgatataggagaaagcagagacagaagc
aaaggaggagaaacacttgacgaatgtggtttgaagtttcttttggcagttcgtcttcac
acttttatgacaacttctctgccacctgctcacagagctcagctattatatcaaggtttg
tcttcgagtcattttgcctgggcgtttcactctattgcagaagaagaacttctaaacatg
cttcctgcagtacagaaaggtgatccaacatggtcagagctcagagctatgggaatagga
tggtgggttcgaaatacccataatttgcgcagatgcattgagaaggtcgctaaagcagcc
tttcaaagaaacaatgaccctcttgatgcagccattttctatcttgcaatgaaaaagaag
actgtaatttggggactatacaggtctctaaaagatactaaaatgacacagttctttggg
aacaattttactgaggacagatggcgtaaagcagcactgaagaatgctttttcattgcta
ggcaagcaacgttttgaacattctacagcattttttttattggctggccacttaaaagat
gccattgaggtctgcctagagaaattaaatgacattcagctagctcttgtaattgcacga
ctctatgaatcagaatttgaaacatctggtacttacaaatcaattcttcagaagagaatt
ctgggaagtaagcctcgttccactgaaagtccattaaaaccacattttgatccttttctc
cgaagtatggcttactggattttggaagagtatggtcatgctcttgatactcttttaagc
catcccactttgaatgatgaagatgaaggaagcttctcaaactgtagcccttcggtattt
aatttttataattatctaaggacgcatcctctcttgctgagacgccattttgggtcttct
gatttatcttccacaaggatatgtgtaacaggagaaaatgggctggcagatgaaatcaat
ttagaggaacgaaaattattctttactgcagcatatactcatttgaagtctggctgtccc
atgttggctttagaagtattatcaaagatgcctaaagtggtcaaaaagtcaaagtcttta
agaagaacattaagtttaaggaacactagtaaagaatgttcaccctcttctccaatgcca
gtagaatctaaagatgaccagtttttcaggactaacaggtcagaaccagtgctaaatggt
ttaggatcattatcagatgcttcaccagacagacattcagattctgatgctttgtttgat
tggaatcagccagctgcagtcttacaagatgacccattggaattaaagtgggacagttac
aaagatgaggaaagtgaggattcttgccttgtaatgaaacctttgcagaagataacaggt
gaaaaaacaaatgaagttagttctagctgcactgaaacatacagttcaggaggtgaaaat
gatgtcttagtttcatcagaagacataatttgtgtacagctgaaatttagggcatgcctg
aagattcttacagaggaacttcgaacattatccacgggctatgaagtagatggtggaaaa
ttaagataccagttgtataattggcttgaaagggaggtggtagcccttcagaagacatgt
gaatacaatattgaagcagatgattctcagagagaaattatcccagtaatgggtgaaaat
tccttaagtgaaagagctgaagacttgtcagatatacaactaaaagaaaatattcaaaga
agacactggcttataaaataccaatcacttttgcgaatgtttcttagttattgcatcctc
catgggtctcatggtggaggcttggcatctgtacgaatggaactgattttgcttctgcaa
gaatctcaacaggaattttcggagcaatcgtatagtaatattgtatctgaacagagcaca
atacctcttctttttgcctgtactgcaagtgccaaaacggtggtggccaacccattattg
catcttagtaacctgacacatgatatactacatgctattatttctcttgactctccaccc
cacccagaggtacaaaacaataagatacaagtaatgcacacattagcagcatctttatca
gcttgcatataccagtctctctgtgggggtcataactacagtttattgcaagcaaaccaa
ttcactggaatgatttatcagacattgttgctctctcatcggcattctctaagaacagca
agttcagatgaaacagtaacaccaaatactacaccagctcaatggccaggaataatggat
ttaatacaattgctgaatcaagctggggaagaagctcagtctgggattacagttttgctc
tgtgaaattcttactgcaatctaccttagtctcttcattcatggtctagcaacacattcc
agcaatgaattattcaggattgtggcccatccccttaatgacaaaatgtggtttgctgtc
tttggtggtggtgcaaagattcccaagaaaggaccaattcaagaaacaaccaagatggcc
tcttctcctatagatgacggtgagaagcaaaataagcggtttagactgacatcaaaatca
tcatcaaaagaaaattcacctactattttacctggaaaagaacaagacttttctatttac
aaagagaaatttattcctcctgaacttagtatttgggactactttatagcaaagccatat
cttggatcatcccaaactagatttgaatatgattcagaagaaagtcaggacagcagtgat
gaagatgaagatgaagatggagcgttcttatcagattcaaaacttcaggaacactctaac
tcaaattcatttagttggtcattgatgcgcttggctatggttcagctagttctccgtaac
ttgaaaagtttctacccattggctggacatgatcttacagaacttccagtttgttcaccg
ctatgccatgcagttctaaaggctcttcagcgctgggaacaagttcttctcagacgactt
gaaatgcatggaggtccaccagaaaactttatttctattcacattttacaagatgcctca
tcttcaggtcctgcactacttcgccacaaagctttgttagagccaacaaacactcctttc
aaatccaaaagtcattatgcattgtccgtaaaaagactttggcagtacctcgttaaacaa
gaaatggtccaagaaaccttcatcagaaacatatttgccaaaagaaagtgtttaaatgag
tcattagaagaccaggctgaatttaccaaaactagttcaggagaagaatcgggaatcaat
aagatagagcatgatgcaggatctcctggaagtaaagcaagaattatccataaagagtct
gacattattactgcctttgctgtcaataaggccaacaggaattgtattgcaatagcttca
agccatgaaattcaagaactggatgtttctggaattttagcaactcagatctacacttgg
gttgatgaagatattgaagtggaagctaaaggagctgatgacttcttagttatacatgct
cgtgatgacttgggaaacattcaaggaactactccttatacacacagcactcctggaaca
ccaatcaatatgccatggcttggcagcactcagactggcaggggtgctgctatggaatat
tccaataaatttaatggaatcagaaaggaattggccagaaaagagatgatcaagaagaat
ctcaataatgtcagaagaatggcttcccacccaacactaccatattatttgacaggtgcc
caggatggcagtgtaagaatgtttgaatggggccattctcaacaacttgcatgctttcga
tctggtggcaactctagaattacacggatgagatttaattatcaaggcaataagtttggg
atcgttgatggtgatggacacataagtttgtatcaaacaaactgtaaaggttgcctacat
aatggaagcacacccaaaccatacctgacatggcaatgccataataaaacggctagtgat
tttgttttcatcagttcttcatctttgatagctactgccgggttatctactgacaacaga
aatatttgtctgtgggatactttggttgccccttctagtagcctggttcatgcatttacc
tgtcatgatactggagcaactgttttggcatatgcccccaaacaccagctattaatatct
ggtggaagaaaaggctatacctgcttaatagatcttcgtcaaaaacaacagagacaattt
ttccaaagtcatgattctccaattaaagcaattgctgtagatcctacagaagaatatttt
gttacaggatctgcagaaggaaatatcaaggtatggagtctgtctaatttcagccttctt
catactttcctcaatgaacattctagacaatctattttcagaaatcttgggacaggtgtc
atgcagattgagacaggaccagcaaatcacatattctcctgtggagctgatgggacagtg
aaaatgagaattttgcctgatcagtttaattcatttggtgaagtgttgaaaactgatgtg
aaatatgtgttctaa
DBGET
integrated database retrieval system
