Pituophis catenifer annectens (San Diego gophersnake): 139313300
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Entry
139313300 CDS
T11059
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03022
Basal transcription factors
pcae03420
Nucleotide excision repair
pcae04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139313300 (CDK7)
09124 Replication and repair
03420 Nucleotide excision repair
139313300 (CDK7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139313300 (CDK7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcae01001
]
139313300 (CDK7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcae03021
]
139313300 (CDK7)
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139313300 (CDK7)
03400 DNA repair and recombination proteins [BR:
pcae03400
]
139313300 (CDK7)
Enzymes [BR:
pcae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
139313300 (CDK7)
2.7.11.23 [RNA-polymerase]-subunit kinase
139313300 (CDK7)
Protein kinases [BR:
pcae01001
]
Serine/threonine kinases: CMGC group
CDK family
139313300 (CDK7)
Transcription machinery [BR:
pcae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
139313300 (CDK7)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
139313300 (CDK7)
DNA repair and recombination proteins [BR:
pcae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
139313300 (CDK7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Seadorna_VP7
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
139313300
NCBI-ProteinID:
XP_070794939
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MLPLLLFSRAKRVIQFSRSSPPPQRFLDSGVPALAVALFALDAVTRPAEASLVNVRRMRK
HRVLNRKPEAAEWNCSLGFRNFKDPVQLRRVLNRFSRLPWSRVVMDARARAKRYEKLDFL
GEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLL
DAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPSHIKAYMLMTLQGLEYLHEHWILHRDL
KPNNLLLDENGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRAPELLFGARMYGVGVDMWA
VGCILAELLLRVPFLPGDSDLDQLTKIFETLGTPTEEQWPGMTNLPDYVTFKSFPGMQFQ
HIFSAAGDDLLELLQGLFRFDPCTRLTASQALKHEYFSNRPAPTPGSQLPRPNCPAEALK
EQQNPVPNLKRKRVDGKDQGLPKKLVF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgctgctgctgttcagtcgagctaagcgcgttatccaattttcgcgctcctcc
ccccccccccaacgtttccttgacagcggagtcccagcactggctgttgcgctcttcgcg
ttggacgccgttacccggccggcagaagcgtctttggtcaacgtgcggcgcatgcgtaag
catagagtgctaaaccggaagccggaagcggcggagtggaattgcagtttgggttttcgg
aattttaaagatcctgtccagctacggagggttttaaatcgcttttccaggcttccctgg
tcccgcgtcgtcatggatgcgcgagcgcgagccaaacgctacgaaaaactggacttcctg
ggtgagggccagtttgctactgtttataaagcaagagacaagaacacaaatcaaattgtt
gctattaaaaaaataaaacttggacacagatcagaagctaaagatggtataaatagaaca
gcacttcgagaaataaaactgctgcaagagcttagccatccaaatattattggacttctt
gatgcatttggacacaaatcaaacatcagtctagtgtttgattttatggaaactgatcta
gaggttataataaaggacactagtcttgttttgacaccttcccacatcaaagcatatatg
ctgatgacacttcagggattagaatatttacacgaacactggattcttcatagggatctt
aaaccaaataatttgttgctggatgaaaatggagttttaaaactagctgattttggtttg
gcaaaatcttttggaagtccaaacagagtttatacacatcaagtagtcacaaggtggtat
cgagcacccgaactattgtttggagctagaatgtatggagtgggtgtggacatgtgggca
gtaggctgcatcttggctgaattgcttctaagggttccatttttgccaggagattctgat
ctggatcagctcaccaagatttttgaaacccttggtacgccaacggaggagcaatggcct
ggtatgacaaatcttccagattatgttacttttaaaagtttccctggaatgcaatttcag
cacatcttcagtgctgccggtgatgatttgctggaattactgcaaggcttatttcgcttt
gatccttgtactaggctcacagctagtcaggcactgaaacatgagtattttagtaatcga
ccagcaccaacacctggaagtcaattgccaagacccaactgccctgcagaagctttgaaa
gagcaacaaaatcctgttcctaatttaaaaaggaaaagagtggatggaaaagatcaaggg
ttaccaaaaaaactggttttttga
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