Pituophis catenifer annectens (San Diego gophersnake): 139313391
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Entry
139313391 CDS
T11059
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04137
Mitophagy - animal
pcae04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139313391 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139313391 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139313391 (VCP)
03009 Ribosome biogenesis [BR:
pcae03009
]
139313391 (VCP)
04131 Membrane trafficking [BR:
pcae04131
]
139313391 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcae04147
]
139313391 (VCP)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
139313391 (VCP)
Ribosome biogenesis [BR:
pcae03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
139313391 (VCP)
Membrane trafficking [BR:
pcae04131
]
SNARE
SNARE associated proteins
Others
139313391 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
139313391 (VCP)
Exosome [BR:
pcae04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139313391 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
ResIII
TsaE
SLFN-g3_helicase
Viral_helicase1
NACHT
Sigma54_activat
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
139313391
NCBI-ProteinID:
XP_070795092
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MEIVNASFGQVLFYLSSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQ
LFRGDTVLLKGKKRREAVCIVLSDDSCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKY
GKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDP
SPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALF
KAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF
EEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRP
NSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGAD
LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE
VPQVTWQDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA
IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI
GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE
KSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE
RERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS
FRFPSGNQGGAGPSQGTGGSGGGNVYSEDNDDDLYG
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgtaaatgcctcgtttggacaggttctcttctatttaagttccaaagctgat
gacttatcaactgcaattctgaagcagaagaaccggcccaatcggttaattgtagatgaa
gcaatcaatgaggacaacagtgtggtgtcactgtcgcaggccaagatggatgaactgcag
ctcttccggggagacacggtgctgctcaaaggcaagaaaaggcgagaggccgtgtgcatc
gtgctctccgacgactcctgctcggatgagaagatccgcatgaaccgggtggttcgcaac
aacctgcgggtgcgacttggagacgtcatcagcatccagccttgtccggatgtgaagtat
ggcaagcgcatccatgtgctgcccatcgatgacaccgtggaagggatcacagggaatctc
ttcgaggtctacctcaagccatacttcctggaggcttacaggcccatcagaaaaggggac
attttcctggtgcgtggaggaatgcgcgcagtggaattcaaggtggtggagacagacccc
agcccctactgcatagtcgctccggatacggtgattcactgtgagggagaacccatcaag
cgagaggatgaagaggaatctctgaacgaagtgggctatgatgacatcggaggctgccga
aagcagctggctcagatcaaggaaatggtggagctcccacttcgacacccggctctcttc
aaggccattggggtgaagcctccccgtggaatcctcttgtatggtccacctggtaccggg
aagaccttgattgccagagccgtggctaatgagaccggagcatttttctttctcatcaat
ggtcctgagatcatgagcaagctagcaggggagtcggagagcaacctgcgcaaagccttt
gaggaagccgagaagaacgcgcctgccatcatcttcattgacgaactggatgccattgcg
ccaaagagggagaagacccacggggaagttgaacggcgcattgtgtcccagttgctgacc
ctcatggatggcctcaagcagcgagcccacgtcattgtcatggctgccaccaacagacca
aacagcatcgatccagccctccggcggttcggccgctttgaccgggaggtggacatcggc
atccccgacgctactggccgcctggagatcttgcagatccacaccaagaacatgaagctg
gctgatgatgttgatctggagcaggtggccaatgagacccacggccatgtgggggctgac
ttggctgcgctgtgttcagaggcggcactgcaggccatccggaagaagatggacctgatt
gaccttgaagatgagaccatcgatgccgaagtgatgaactccctggccgtcaccatggat
gacttccggtgggctctaagccagagcaatccctccgcactgcgcgagaccgtagtggaa
gtcccgcaggtgacctggcaagacatcgggggcttggaagacgtcaagcgggaactccag
gagctggttcagtacccagtggagcatcctgacaaattcctcaagtttggcatgacccca
tctaaaggggtcctcttttatggcccccctggctgtggaaagaccctgctagccaaagcc
attgccaatgaatgccaggccaatttcatctccatcaagggcccagagctgctcaccatg
tggtttggggagtcagaagccaacgtgcgcgagatctttgacaaggcccgccaagcagct
ccctgcgtgctgttcttcgatgagctggattccattgcgaaggcccgtggggggaacatt
ggcgatggcggtggtgccgccgaccgagtgatcaaccagatcctcacagagatggatggc
atgtcgaccaagaagaacgtcttcatcattggcgccaccaaccggccagacatcattgat
ccggctatcctgcgccctggacgcctggaccagctcatctacattcctctgcctgatgag
aagtctcgtgtggccatcctcaaggccaatctgcggaaatcacctgtggccaaggacgtg
gatctggagttcctggcaaaaatgaccaatggcttctcgggagctgacctcacggagatt
tgccagcgggcttgcaagctggccatccgcgagtcaatcgagagcgagatcaggcgggaa
cgggagaggcagaccaacccctcggccatggaggtcgaagaggacgacccggtccccgag
atccgtcgggatcacttcgaggaagccatgcgttttgcccgccggtcagtcagcgacaat
gacatccgcaaatacgagatgtttgcacagactctgcagcagagtcgtggctttggcagc
ttcagattcccatcaggtaaccagggcggtgctgggccaagccagggcaccggaggcagc
ggcggaggcaacgtttacagtgaagacaacgatgacgatctctatggttaa
DBGET
integrated database retrieval system
