Pituophis catenifer annectens (San Diego gophersnake): 139313744
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Entry
139313744 CDS
T11059
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma
KO
K08526
retinoid X receptor gamma
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03320
PPAR signaling pathway
pcae04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
139313744 (RXRG)
03320 PPAR signaling pathway
139313744 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139313744 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pcae03310
]
139313744 (RXRG)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
139313744 (RXRG)
Nuclear receptors [BR:
pcae03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
139313744 (RXRG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
139313744
NCBI-ProteinID:
XP_070795288
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MYGDHPHFMKFHTDFVSKYYMHSSGFQVFNTNSFPIHPRSVPGNLSPNGNSVINSKSNQL
EASLDASEILSIPMSSIGSGSTTGCPLRRITSPVASHAVPLTSPPDMSFAVHTSPQSSIM
NSAGTSDDTKPLPNFQRMGAMNYSSPSPGFLTKHVCAICGDRSSGKHYGVYSCEGCKGFF
KRTVRKDLVYTCRDNKDCLIDKRQRNRCQYCRYQKCLATGMKREAVQEERQRSRERSENE
VESTSSNGGSLEDMPVERILEAEMAVEPKSESYSDVSAETSTNDPVTNICHAADKQLFTL
VEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHS
AGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSSPAEVELLREKVYAT
LEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPL
QIT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtacggggatcatccacacttcatgaagtttcacacagactttgtgagtaagtactac
atgcacagttctggatttcaggttttcaacacaaatagtttcccaattcatcccaggtct
gtacctggaaatctgtcaccaaacgggaactctgttataaacagcaaatccaaccagctg
gaagcatctcttgatgcatcagaaattctgtccatccccatgagctccatagggtctggc
agtacaacaggctgtccgcttaggagaatcacgagccctgttgcgtcccatgctgttcct
ttgacttctccaccagacatgagttttgctgtgcataccagcccacagtccagtatcatg
aacagcgctggaacctctgacgataccaagcctttgccaaatttccaacggatgggagcg
atgaattattcatccccaagtccaggattcctcacaaagcatgtctgcgcaatttgtgga
gacagatcgtcagggaagcactatggggtgtacagttgtgaaggctgcaaaggattcttt
aagcggacagtaagaaaggatcttgtctacacatgtcgagataataaagactgtctgatc
gacaagcgtcagcgaaaccgttgccagtattgccgttatcagaaatgtctagcaacaggc
atgaaaagagaagcggttcaagaagagaggcagagaagcagagagcggagtgagaatgaa
gtggaatctacaagcagcaatggtgggagtcttgaagatatgcctgtagaaaggattcta
gaagctgaaatggcagttgaaccaaagtctgaatcatacagtgatgtgagtgcagaaact
tcgaccaatgatcctgtcaccaatatttgccatgcagctgataaacagctcttcacattg
gttgaatgggccaagcggattccgcacttctcagacctgacattagaagaccaagttatc
ctcctccgagcaggttggaatgaactgctgattgcctctttttcccatcgctctgtttct
gtacaggatgggatcttactggccaccggcttacatgtgcatcggagcagtgcacacagc
gctggagtgggctccatatttgacagggttcttactgagttggtatccaaaatgaaagac
atgcagatggataagtctgaactggggtgtttgcgagccattgtcttgttcaatccagat
gccaaaggcctgtccagtcctgcagaggtagaattgctacgtgagaaagtttatgctact
ctggaggcatacacaaaacagaagtatcctgagcaacctggaagatttgctaaactactt
ctcaggctgcctgcattgcgatctattggtctgaagtgcctggaacatctcttcttcttc
aagctaataggtgatacccctattgacacctttcttatggagatgttagagacacctctg
caaatcacctaa
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