Pituophis catenifer annectens (San Diego gophersnake): 139313777
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Entry
139313777 CDS
T11059
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04115
p53 signaling pathway
pcae04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139313777 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
139313777 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139313777 (COP1)
Enzymes [BR:
pcae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139313777 (COP1)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139313777 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
139313777 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
Beta-prop_CAF1B_HIR1
zf-RING_2
zf-RING_UBOX
Beta-prop_EML
Beta-prop_DCAF4
zf-C3HC4_3
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
WD40_RFWD3
RING_XB3-XBAT31
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
139313777
NCBI-ProteinID:
XP_070795328
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MSGSRPSPQHPPAGPGAAGPPGSSSTSSVTTSACLGTTMATGTAMATGSSAVPSRPVLVA
AAVSGSSCSGGLSRLAGTRVGSGSGAASSGTRKRPLLTPLCNGLLNSYEDKSNDFVCPIC
FDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQR
FEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAA
QLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPS
PSHSSIIDSTEYSQPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRLS
DDSRTSNQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAG
VTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDG
FTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCC
VKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDS
QLKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKF
DTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaagcaggccatcgccgcagcaccctccggccgggccgggtgctgcgggccct
cccggctcctcctcgacctcctcggtcaccacctcggcctgcttgggcaccacgatggcg
acaggcaccgcgatggcgacgggctcctcagcggtcccctcgcgacccgtgttggtggcg
gccgccgtgtccggatcctcctgcagcgggggcctttctcgcctggcggggacccgagtc
gggagcggcagtggcgcagccagcagcggcaccaggaagaggccgcttctgactccgctt
tgcaacggccttctgaattcctacgaggacaaaagcaacgatttcgtctgtcccatctgc
tttgatatgattgaagaagcttacatgacaaaatgtggacacagtttctgttacaaatgt
attcatcaaagcctggaagataacaacaggtgtcccaaatgtaattatgttgtggataac
attgatcatctatatcccaactttttagtgaatgagctcatccttaaacagaagcaaaga
tttgaggaaaagagattcaaattggaccattcagtgagtagcaccaatgggcacaggtgg
caaatatttcaagatttgctgggaacagaccaagacaatcttgatttggccaatgttaac
ttaatgttggaacttctggtgcagaagaagaaacaactggaggcagagtcccatgctgcc
cagctgcagattttgatggaattcctcaaggttgccaggagaaataagagagagcagtta
gagcaaatccagaaggagctgagtgttttggaagaagatattaaacgagtagaggaaatg
agtggcttgtattcaccagtcagtgaagacagcactgtgccccagtttgaagcgccgtct
ccttcacacagtagcattattgattctacagaatatagccaacctggatttagtggcagt
tcccagactaagaaacagccatggtataatagtactttagcttcaaggaggaagagactt
acagctcattttgaagatttggaacaatgctacttttctaccaggatgactcgtctatca
gatgatagtagaacctcaaaccagctggatgaatttcaagagtgcctgtctaagtttact
cgctacaattctgttcgacctttggcaacactatcttatgcaagtgatctctacaacgga
tctagcatagtctcaagtattgaatttgatcgagactgtgactattttgctattgcggga
gtcacaaagaagattaaagtctatgaatatggcacagtcattcaggatgcagttgatatt
cattatccagaaaacgaaatgacatgtaattccaaaatcagctgtatcagctggagtagt
taccacaaaaaccttttggccagcagtgactatgaaggaacagtgatcttatgggatgga
ttcacagggcaacgttcaaaagtctatcaggagcatgaaaaaagatgctggagtgtggac
tttaacttgatggatcctaaactcttggcttcaggttctgatgatgcaaaagtgaagctg
tggtcaaccaacctggacaattcagtagcaagcattgaggccaaggcaaatgtgtgttgt
gtaaaatttagcccttcatccaggtatcatcttgcttttggttgtgcagatcactgtgtc
cactactacgatcttcggaacactaaacagcctattatggtcttcaaagggcaccgcaaa
gctgtttcatatgcaaagtttgttagtggagaagaaatcgtttctgcgtcaacagatagc
cagctaaagttatggaatgtagggaagccacattgtttgcgttcttttaagggtcacatc
aatgagaagaattttgtaggcttggcatctaatggagactatattgcctgtggaagtgaa
aataattccctttacctgtactataaaggtctctcaaagacactgctaaccttcaaattt
gacactgtcaaaagtgtcttggacaaagaccgtaaggaggatgacacaaatgaatttgtc
agtgctgtatgctggagggcactaccagatggggagtccaatgtattgattgctgctaac
agtcagggtacaattaaggtactggaactggtatga
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