Pituophis catenifer annectens (San Diego gophersnake): 139313907
Help
Entry
139313907 CDS
T11059
Symbol
RPAP2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcae01009
]
139313907 (RPAP2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcae03021
]
139313907 (RPAP2)
Enzymes [BR:
pcae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
139313907 (RPAP2)
Protein phosphatases and associated proteins [BR:
pcae01009
]
HAD phosphatases
Fcp/Scp phosphatases
139313907 (RPAP2)
Transcription machinery [BR:
pcae03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
139313907 (RPAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
139313907
NCBI-ProteinID:
XP_070795485
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MMAEGAPRSASNGRRRLGNKPPLKNEDAAERKAALEAAIRKKIECERKALQVVEHLLEDD
ITEELFVDCGRLITPSHYLDVVEERFIIKLCGYPLCQNKLQNVPKQKYKISTKTNKVYDI
TERKCFCSNFCYKASKYFEGQISKTPVWLREEERPPTIELLKKESSGYSGKEIKLVSERI
KALDIENPTPAEIHHDSDSGSESNSDAEQEFVSSVLQENLSNTEKLAGKPLKSILKKSPT
KRVEPKLFTSEDTLDETSAQLNKGTSDVLQEEDGFPGNIQGGKPCHSQNVLENVQVSENL
GNNSSCSQVVFLGVSQKGADQFKRLLAKSKLSVRSPADSLTAKDSLLESLWQTFTEWRSE
ETLKLLHGSCSTSSHLLQHTQPNDSEKEELDEDDLENASSSEGVSQKHTLNSLDQSLPFQ
DSRTAAKPLPSFENLKKETIQLELKVSEFYKGKFTVIKEDDLAMQSEREQQNGKSQDNEQ
WAPILPLVDSKAQQQIRTRIVLEKLQKALPAVLGPLRIPFGDVYSELRNLVRTFRLTNTN
IIHKAPVWTLITIVLMSILSENIPAFAHCQQNKGYTQFLATLLEELCITTEDLESLTKIF
KSG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggaaggagcgccgcgaagtgcctcgaacgggcgcagacgcttaggaaacaaa
ccacctttaaaaaatgaagatgctgctgaaaggaaagcagcacttgaagctgctattagg
aaaaaaattgagtgtgagcggaaagcattgcaagttgttgaacacctgttggaagatgac
attaccgaagaattatttgtggattgtgggaggcttataacaccttctcactatctggat
gtggtggaagaacgatttatcatcaagctatgtggctaccctctctgtcaaaacaagcta
cagaatgtgccaaaacaaaagtataaaatttccacaaaaacaaacaaagtgtatgacatt
accgaaagaaagtgtttttgcagcaatttttgttacaaagcatcaaaatatttcgagggc
caaatatccaaaactccagtgtggcttcgagaagaagaaaggccaccaactattgagctg
ctaaagaaagagtcaagtggctactctgggaaggaaataaaattagtcagcgaaagaatt
aaagccttagacattgaaaatcctactcctgcagaaatccatcatgactctgactcaggc
agtgaaagcaacagtgatgctgagcaggagtttgtttcttccgttctacaagagaatctt
tcaaatacagagaaattggccgggaagcccctcaagagcatccttaaaaaaagccctacc
aagagagttgaacctaagctcttcacctcagaggatacgcttgatgagacttcagcccaa
ctaaacaaaggcacatcagatgttctacaagaagaggatggttttcctggtaacattcag
ggggggaaaccttgccattctcagaatgtccttgaaaatgtgcaggtctctgaaaatctt
ggaaataactctagctgttcccaagtagtgtttctgggagtgagccaaaaaggggcagac
caatttaaaaggttacttgctaaatcaaaactgtctgtcagaagtccagcagactccctt
acggccaaagatagtttgttagagagcctctggcagacatttactgagtggagaagtgaa
gagacactaaaactcctccatgggtcttgcagcacctccagtcatctactgcagcacacc
cagccaaatgactctgagaaggaagagcttgatgaagatgatttggaaaatgctagtagc
agtgaaggcgtatcccaaaaacacactttaaacagcctagatcagtctttgcctttccag
gactctaggacagctgctaaacctttaccgagctttgaaaatttaaaaaaagagacaata
cagttggagttaaaggtgagcgaattttacaaaggaaagttcactgtcatcaaagaggac
gatttggcaatgcaatcagaaagggaacagcagaatgggaagtctcaagacaatgaacag
tgggctcccattttgccacttgtagattctaaagctcagcagcagatacggacacggatt
gtgcttgaaaagctgcaaaaagctttgcctgctgttttgggccctcttaggattcctttt
ggtgatgtttatagtgaactgagaaatcttgtaaggacatttaggttgacaaatacaaat
ataattcacaaagctccagtatggaccttaattaccattgtgctgatgtctatcttgtca
gaaaatattcctgcttttgcacattgtcagcaaaataaaggatatacacagttccttgct
acgttgcttgaagaattatgtatcacaaccgaagatctggaaagtctaacaaaaatattt
aaaagtggttga
DBGET
integrated database retrieval system
