Pituophis catenifer annectens (San Diego gophersnake): 139313959
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Entry
139313959 CDS
T11059
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcae03036
]
139313959 (MSH4)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Meiosis-specific proteins
Others
139313959 (MSH4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
ATPase_2
AAA_28
nSTAND_NTPase5
Myb_DNA-bind_3
AAA_30
Motif
Other DBs
NCBI-GeneID:
139313959
NCBI-ProteinID:
XP_070795549
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MAEVSAASTSYSGRCSSSSGPERQPRYQFGLQETPGLTDEPSHPQRGKTAIRVPNGASAF
PPKGLEDSYFGDKSSYAENISTVNMTSPSSTKDIKISRVRKTPLSSNRPGCRNWTPFMGY
SVTSSSAVSIHSIASVIVAVIEGRGFARGEVGMASVDLKNPEVVLSQFADNTTYTKVITK
LRILTPLEIIMSNTACDSGNATKLYTLIAENFKNVTFTTVQRKYFNETKGLEYIEQLCTP
EFSTVLMEVQSKYYCLAAVAALLKYVEFIQNSVYAPKSLKIRFHGSEQTAMIDSTSALNL
ELITNNRDPRKGHTLFGILNYTKTPGGSRRLRSNILEPLIDADSINTRLDSVQELLQDEE
CFFGLQAVIGRFLDTEQLLSVLVQIPKQDTVNASESKITNLIYLKHTLELVEPLKEALKS
YKTPLLKAYYSSLEDSRFGIILEKIKTVINDDTRYTKGCLNMRTQKCYAVKPNINEFLDI
ARRTYTEIVDDIAGMITQLAEKHNLPLKTSFSSARGFFIQMSADCAAVHSGQLPSEFTKI
TKMKNVYSFTSPDLMKMNERCQESLREIYHMTYLIVCKLLSEIYEHIHCLYKLSDTVSML
DMLQSFAHACTLSDYVRPEFTDTLAIKQGWHPVLEKVHFEKPVPNDTYITEGSNFIIITG
PNMSGKSTYLKQIALSQIMAQMGSFVPAEYSSFRIAEQIFTRIGMDDDIETNSSTFMKEM
KEVTYIIQNANDRSLIIIDELGRGTSPEEGIGICYAVCEYLLNLKAFTLFATHFLELCQI
DNLYPNVENNYFEVQHVRSSCEIREKIAYTYILSKGCTEEKNYGLKAAEVSSLPLSIILD
AKKLVTLIDKQMMQQQRTDPEILKEKAMYHLANRLIQTARNSQLDPDSLRIYLKGLKKKY
ETDCIASEQVAADVR
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtatcggctgcttccacctcatattcgggccgctgctcgtcgtcttctggc
cccgagcgtcagccccgttaccaattcggtcttcaagagacgccgggtttgaccgacgag
ccctctcaccctcagcgggggaaaacggccatcagggtccccaatggcgcctcggccttc
cctccgaaagggttggaagattcatattttggagacaagagttcttatgcagaaaacatt
agcacagtaaatatgacaagcccttcttccaccaaagatataaagatttctagagtacga
aaaacacctctctcatccaaccgaccaggatgtagaaactggactcctttcatgggatat
tcagttacatcatcttcagcagtctccattcacagtattgcatcggttatcgtggctgta
atagaagggagaggatttgctagaggtgaagtgggaatggcaagtgttgacctaaaaaat
ccagaagtagtactatcccagtttgctgataatacaacatataccaaggttatcaccaaa
ctcagaattttaacacccttagaaataataatgtcaaatactgcctgtgattcaggaaat
gcaacaaaactgtacactttgatagcagaaaatttcaagaatgtgacttttaccacagtc
cagagaaaatattttaatgaaaccaaaggtttggaatacattgaacaactatgtacacca
gaattcagcactgttttaatggaagttcagtccaagtattactgtctcgcagctgttgct
gccttgctgaaatacgttgaattcattcaaaattcagtttatgcgcctaagtcacttaag
attcgtttccatggaagtgagcaaacagcaatgattgattcaacatcagccctaaatctt
gaattaattactaacaatagagatcctaggaaaggccatactctatttggcattctaaat
tatactaagacaccagggggaagtcgaagacttcggtctaatattctggaacctctgatt
gatgctgatagtatcaacacaagattggattctgttcaagagctccttcaggatgaggaa
tgcttttttggtcttcaggcagttataggaagatttttggacactgaacaattactttca
gttttagtacaaattccaaagcaggatacggttaatgcgtctgaatcaaagataaccaat
ttaatttatctgaagcatactttggaacttgtggagcctttgaaggaagccttaaaaagc
tataagacgccattgttaaaagcttattatagctctttggaagatagcaggtttgggatc
attcttgaaaagattaaaactgttattaatgatgatacaagatacacgaaaggatgtttg
aatatgagaactcaaaagtgctatgcggtgaaacctaatattaatgaatttcttgatata
gcacgaagaacctacactgaaattgtggatgatatagctggaatgataacacaacttgca
gaaaaacacaaccttcctttgaaaacaagctttagttcagctcgaggattttttatccag
atgagtgctgattgtgcagcagtacacagtggtcaacttccttcagaatttaccaagatt
actaaaatgaaaaatgtatatagttttacttcacccgatttaatgaaaatgaatgaaaga
tgccaggaatccttgagagaaatctatcacatgacttacttgatagtgtgtaaactattg
agtgaaatctatgagcatatccattgcttatacaaactctctgacactgtctctatgcta
gatatgttgcagtcatttgcccatgcttgcacactgtctgattatgtacgtcctgagttt
acagatactttagcaataaagcaaggatggcatccagttcttgaaaaagtacattttgag
aaacctgtccccaatgatacctatattacagaaggaagtaattttataataattacagga
ccaaatatgagtggaaaatcaacctacctaaaacagatagccctttctcagattatggca
caaatgggttcttttgttccagcagaatattcttcttttaggattgctgaacaaatattt
accagaataggtatggatgatgatatagaaacaaattcatcaacattcatgaaagaaatg
aaagaggtaacatacatcatacaaaatgctaatgacagatcacttatcataattgatgag
cttggcagaggtaccagtcctgaggaaggcatcggcatatgttacgcagtctgtgaatat
cttctaaatttaaaagcattcacactctttgctactcatttcctggaattatgtcagatt
gataacttatatcccaatgtggaaaacaattactttgaagtgcagcatgtaagaagcagt
tgtgaaattagggagaaaattgcttatacttacattctttctaaaggatgcacagaggaa
aaaaattatggcttgaaagctgcagaggtttcctctcttccgttatcaataatattggat
gccaagaagctagtaactcttattgataaacaaatgatgcagcagcaaagaacagatcct
gaaatattaaaggagaaggctatgtatcacttagcaaatagattgattcagactgctcgc
aactctcaactggatccagacagcttgcgaatatacttgaaaggtttgaagaaaaagtac
gaaactgattgcattgcctctgaacaagtagctgcagatgttagatga
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