Pituophis catenifer annectens (San Diego gophersnake): 139313997
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Entry
139313997 CDS
T11059
Symbol
USP1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
139313997 (USP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcae01002
]
139313997 (USP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139313997 (USP1)
03400 DNA repair and recombination proteins [BR:
pcae03400
]
139313997 (USP1)
Enzymes [BR:
pcae01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139313997 (USP1)
Peptidases and inhibitors [BR:
pcae01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139313997 (USP1)
Ubiquitin system [BR:
pcae04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139313997 (USP1)
DNA repair and recombination proteins [BR:
pcae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
139313997 (USP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
AKLP2_N
Motif
Other DBs
NCBI-GeneID:
139313997
NCBI-ProteinID:
XP_070795600
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MPGVLPSDSHGLSRDPSATTKSRLSLKFFQKRETKRALDFVESAENEQKASEYESSEIDQ
IVPAAQPLSPACCDKKDNMLPFVGLNNLGNTCYLNSILQVLYFCPGFKTGVKQLFNTISK
RKESLKDEIDKETTKEHSFGSYELVCSLHTLIVSVEQLQASFLLNPDKYTDELATQPRRL
LNTLRELNPMYEGYLQHDAQEVLQCILGHIQGTCQLLKEELRQKSLEEPAIQLKKKSNLD
ANGTSFEEDDSVLQSQTIKNYDNKTKENAKRKNVMEGGNEKKKSKVSKEKNGIEENLRQT
RSKRKALEEKIENQTEAIIKQSVENENTKPVHKKSRLRLNWLKSSNDQPSILSKFCSLGK
LKTNLVSKDPVKDINNSEFTDSSLKYENDSKSSGECCDSSPMKTTVGERIECFSQELAIF
NLVERLFQGQLVLRTRCLECECFTERREDFQDISVPVQKDELLKVEENAEISPEPKMEVK
TLKWAISQFASIERIVGEDKYFCENCLHYTEAERSLLFDKMPEVVTIHLKCFAANGLEFD
SYGGLSKINTPLQTPLKLSLDDWSINPSNEIYGLFAIVMHSGITISSGHYTASVKLTDLD
SLQIDSDNFSSDALRKFCPEPLNEQEAVTEDYDDGEVSFTVGESTQPNKGLNKKNMEAVG
LLGGQKSKSNCDLPNNKVAHSEKIAHVMGEARNAEWNCPRAIVTFEECEQTGTTSTGLDN
EAAHLIHSLKQYKDKWLLFDDSEVKLIEERDFLNLLSPISSSTSTPYLLFYKKIV
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcgtgctgcccagtgacagccacggactttcaagagatccgtcagccacaaca
aaaagcaggctgtcgttgaagtttttccagaaaagggaaacaaaacgagcgctggatttt
gtagaatcggcggaaaatgaacaaaaggcttcagaatatgagtcttctgaaattgatcaa
atagttcctgcagcacaacctctttcacctgcctgttgtgataaaaaagacaacatgcta
ccttttgtgggcttgaacaatcttggaaacacttgttatcttaacagtatacttcaggtg
ctctatttttgtcctggctttaaaacaggagtgaaacaattgtttaatacaatttcaaaa
aggaaggaaagtttaaaggatgaaatagataaggaaactactaaagaacattcttttgga
agttatgaattggtatgcagtttacacactttgattgtttcagttgaacagcttcaggca
agctttctcttaaatccagataaatacacagatgaacttgctactcaaccaaggagactg
ctaaatacacttagggagctaaatcccatgtatgaaggatatttgcagcatgatgctcaa
gaagtattacaatgtatattaggacatattcaaggaacttgtcagctcttaaaggaggaa
ctacgacagaaatcactggaggagcctgcaattcaactgaaaaaaaagtctaatttagat
gccaatggcacaagctttgaggaagatgacagtgtgctccaaagccaaactataaagaat
tatgacaacaaaacaaaagaaaatgcaaagaggaaaaatgttatggaaggtggcaatgaa
aagaaaaaatcgaaggtctccaaagagaaaaacggaatagaagaaaatttgagacagact
cggtcaaaaagaaaagctttagaagaaaaaatagaaaatcaaactgaagctattattaaa
cagtctgttgaaaatgaaaatacaaaaccagtacataaaaaatcaagacttagattaaat
tggttaaaatcttccaatgaccagcctagcattttatctaaattttgtagtctgggaaaa
ctgaaaacaaatttggtgtccaaagatccagttaaagacattaacaactctgaatttacg
gacagttccctcaagtatgaaaacgatagcaaatcaagcggagaatgttgtgattcctca
cctatgaaaactacagttggagaaagaattgaatgctttagtcaagaattggctatcttc
aatttagtggagcgactcttccaaggtcaattggtcttacgaacccgatgcttagagtgt
gagtgctttactgagagaagagaagattttcaagatatcagtgtacctgttcaaaaagat
gagctcttaaaagtagaggagaatgctgaaatttccccagagcccaaaatggaagtaaag
actttgaaatgggcaatttcacagtttgcttccatagagaggattgtgggagaagataaa
tacttttgtgaaaattgtctccattacacagaagcagaacgcagtcttttatttgataaa
atgcccgaagttgtaacaattcacctgaagtgctttgctgcaaatggcttagagtttgat
tcttacggtggactctccaaaataaatactcctttacagacacccctcaaactgtccttg
gatgactggagcataaacccatccaatgaaatctatggattatttgccatagtgatgcac
agtggaattactatcagcagcggccactacacagcctcagtgaaactaacagatcttgac
agcttgcaaatagacagtgataatttcagcagtgatgctcttcgtaaattttgcccagag
ccactaaatgaacaagaagctgtcactgaggactatgatgatggtgaggtctcttttaca
gttggagaaagcactcaacctaacaaaggactgaacaaaaagaacatggaagctgtgggt
cttctgggcggacagaaaagcaagtccaactgtgatttgccaaataacaaagtagcccat
tctgagaaaattgctcatgtaatgggtgaagcaagaaatgccgaatggaactgtcctaga
gcaatcgtgacatttgaagagtgtgaacaaactggcacaacctccactggactagacaat
gaagcagcacatctaatacattccctaaaacagtataaagacaagtggctactttttgat
gattcagaggttaaacttatagaggaaagagattttcttaatttgttgtctccaatttca
tcatctacatctactccttatctgctattttataagaaaattgtatag
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integrated database retrieval system
