Pituophis catenifer annectens (San Diego gophersnake): 139314070
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Entry
139314070 CDS
T11059
Symbol
RAD54L
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139314070 (RAD54L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcae03400
]
139314070 (RAD54L)
DNA repair and recombination proteins [BR:
pcae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
139314070 (RAD54L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
139314070
NCBI-ProteinID:
XP_070795692
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MRRSLAPSQLAKRKPGGDGSGEDEDWYPEATPKRQKRNTKTDIQECYVSSFRKPLTQLTN
RIHCLDGSKHEAFIRSILSKPFKVPIPNYTGPLGLRALGIKRAGVRHALHDPFEEGALVL
YEPPPLSAHDQLKVDKDKTPVHVVVDPCLSRVLRPHQREGVKFLWECVTSRRIPGSHGCI
MADEMGLGKTLQCITLIWTLLRQSPDCKPEIDKAIVVAPSSLVKNWYNEVGKWLGGRIHP
LAIDGGSKEDIDNKLVGFVNQRGRRIPSPILIISYETFRLHAEALKKGSVGLVICDEGHR
LKNSDNQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFEIP
ILKGRDADANEAGRQKGEERLKELISVVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQ
AELYKYFLMQAKPAEDLKEGKMNVSSLSSITSLKKLCNHPALIYEKCVEEEEGFAGALQL
FPSGYSVKALEPQLSGKMLVLDYILAVTRSTSDDKVVLVSNYTQTLDLFEKLCRSRRYLY
VRLDGTMSIKKRAKIVERFNNLSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND
EQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLGE
LKELFTLNETTTSDTHDKIKCRRCVNGHQVRPPPEGSDCTSDFSQWHHCAEKRGLKDTVL
KTAWDAAVSFTFYHQSHEEQRGIP
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaagtttagctcccagtcagctggccaaaagaaaacctggaggtgatggctct
ggagaggatgaggactggtatcctgaagcaactccaaagaggcagaaacgtaataccaag
actgatatccaggaatgttatgtatcttcttttagaaaacctttgactcagttaactaat
cgaattcactgccttgatggtagtaaacatgaagcctttatccgcagcattttatcaaaa
cctttcaaggttcctattccaaattatacaggccccctgggattgagagcattgggcatc
aaacgtgcaggagttaggcatgctcttcatgacccttttgaagagggggctctggttcta
tatgaaccaccacctttaagtgctcatgatcaactgaaagtagacaaggataaaacgcct
gttcatgtggtggtagatccttgtcttagccgtgttttacgacctcatcagagagaggga
gtgaagttcctatgggaatgtgttacgagccgtcggatccctggaagtcatggctgcatc
atggcagatgagatgggtctagggaagaccttgcaatgtatcactttgatttggacactt
ttgcgccaaagtccggactgcaagcctgaaattgacaaggcaatcgtggttgcgccttcc
agcctggtgaaaaactggtacaatgaagtgggcaaatggcttggaggaagaatccatcca
ctggctattgatggaggctctaaagaggacatagataataagctagttggattcgtgaac
cagcgaggccgtagaatcccatcccccatcctgataatttcctatgaaactttccgtctc
cacgcagaagctctcaagaaagggagtgttgggttggtcatatgtgatgaggggcaccgg
ctgaaaaactcagataaccaaacataccaggctctcaacagcttgaatacgccacgccgg
gttctcatctctggcactcccattcaaaatgatctccttgaatatttcagtctggtacat
tttgtcaactcaggcattctagggacagcccaggagttcaaaaagcactttgaaatcccc
attttaaaaggcagggatgcagatgcaaatgaggctggaaggcaaaaaggagaagagaga
ctgaaagagctgattagtgttgttaacagatgtctcataagaagaacttcagatattctc
tccaaatacttgccagtgaaaattgagcaggtggtgtgttgcaggctgactccccttcaa
gcagagttatacaaatactttctgatgcaagcaaagcctgcagaagatctgaaagaaggg
aagatgaatgtttcgtctctctcttcaatcacatctctgaagaagctttgtaatcaccct
gccttgatctacgaaaagtgtgtagaagaggaagaagggtttgcgggagctttgcagttg
tttccatctggctacagtgttaaggctctagaacctcagctctcaggaaagatgctggtt
ctggactacattctggcagttactagaagcacgagtgatgataaagtagtcctggtgtcc
aattacacacagacccttgacctttttgagaaactctgcagaagtaggaggtatttgtat
gtccgtctggatggtaccatgtccattaaaaagagagcaaagatagtggagcgtttcaac
aatctttctagtcctgaattcattttcatgctgagtagcaaagctgggggatgtggctta
aacctgattggagcaaacaggcttgtgatgtttgatcctgattggaatccagccaatgat
gaacaagctatggcccgagtgtggagagatggccaaaagaaaacgtgctatatctatcga
ttactttcaacagggaccattgaagaaaagatcttccagcggcagacacacaagaaggca
cttagcagctgtgtagtagatgaagaacaagatgtggaaagacacttctctctgggggaa
ctgaaagagctattcactctcaacgagaccactacaagtgatacccatgacaagatcaaa
tgtcgtcgctgtgtgaacggccatcaagtcagacctcctccagaaggatctgactgcact
tctgatttttctcagtggcatcactgtgctgaaaaacgtggcctcaaggacactgtcctc
aagactgcctgggatgctgcagtatctttcaccttttatcatcaatcacatgaagaacaa
cgagggataccataa
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