Pituophis catenifer annectens (San Diego gophersnake): 139314082
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Entry
139314082 CDS
T11059
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
139314082 (PTCH2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
139314082
NCBI-ProteinID:
XP_070795706
LinkDB
All DBs
Position
Unknown
AA seq
1382 aa
AA seq
DB search
MASGQPVPGSGGFFGELPASYAAAANSDLLRRPSYCHAAFALKQISKGKAVGQKAPLWLR
AQFQALLFTLGCWIQRHCGKVLFVGLLVFGALAVGLRVASIETDIEQLWVEEGSRVSQEL
RYTREKLGEESLYTSQMLIQTPKQEGKNILTPDALEMHLEAALAASKVQVLLFGKSWDLN
KICYKSGVPIIENGMIARMIEKLFPCVVVTPLDCFWDGAKLQGGSAYLPGRRDIQWTNLD
PIQLMEELGQFASLEGFKEMLDKAEVGQAYMERPCLDPFDPECPPSAPNSQSQKKPHIPS
ELTGGCHGFSRKYMHWQEELILGGTVKDPQGKLQKAEALQSMFLLMSPRQLYEHYRDDYE
IHDISWSEEKAAAVLEAWQREFVEVAQESLPSNYSQTIHAFSTTTLSDIMKSFSDVSAIR
VAGGYLLMLAYACVTLLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLLGISFNAATTQ
VLPFLALGIGVDDMFLLAHAFTETSQHVPVKERTGECLRRSGTSVALTSVNNMIAFFMAA
LVPIPALRAFSLQAAVVVVFNFAMVLFIFPAILSLDLHRRESKRLDILCCFYSLCSARVI
QIQPQEYADVNDNHTAPTYPHGHPALATSTHITTTVQAFTQCDSSGRHVVTILPPTQHVF
TTPSTLLPANPLGSQIFTPASSTRDLLAQLDESKGAQECVPLPICRWNLSSFARDRYAPI
LLQSQTKGIVVALFLALLGLSLYGTTKVHDGLYLTDIVPRGTKEHAFISAQFKYFSFYNM
FVVTNGGFDYPSSQEALYSLHQAFAAIQYVVREENRQLPKMWLHYFRDWLQDLQAAFDQD
WEAGHITRENYRNGSEDGVLAYKLLIQTGNKKEPFNLNQLTTRRLVDENGIIPPDIFYIC
LTVWVSNDPLGFAASQANFYPPPPEWIHDKYDATGENLRIPAAQPLEFAQFPFYLNGLQH
TSDFVAAIQSVRAICDEVAQTHGVFSYPSGYPFLFWEQYIGLRHWLLQAISIVLACTFLV
CTLLLLNPWTASIIVFVLAMMTVELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVAL
GFLTAIGSRNLRSTVALEHMFAPVMDGAVSTLLGVLMLAGSEFDFILRYFFAVLTILTIL
GLLNGLVLLPVLLSIIGPPAEVTPADNGSRLPTPSPVPPPINHHSFYIRQHGNAFGDSSD
SEYYSETVSASETGEDDRSTYIISPAQSQILVKASKSPNFPQITVVKSYKTSLESPLSLC
SPEWTQSRTPGGHLPAAVTEIKSCLQQQEQPNHRLGSQLAQSTPKPLQTNSITHSTKIPP
SGPGGTFTTVTATASVMLALHPPLPGSCRGYTHEGFESDDNSEKTGPKPSDSLELQDLKQ
NH
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggtcagccggtccccgggagcgggggcttctttggagagctcccggcgtct
tacgcagctgctgccaactccgatctccttcggagacccagctattgccacgcagccttt
gccctcaagcagatctccaagggtaaggctgttggccagaaagccccactgtggctgcgg
gcccagttccaggctctgttgtttacactgggctgctggatccagcgtcattgtggcaaa
gtgctttttgtggggctgctggtctttggggcactggcagtagggctgcgagtagcctcc
atcgagactgacattgaacagctctgggtggaagagggcagtcgtgtcagccaagagctc
cgatacacaagagaaaagcttggtgaagaatctctctacacatcccagatgctaatacaa
actcccaaacaggaaggaaaaaacatcctaactccagatgccttggaaatgcatcttgaa
gctgctttggctgctagtaaagtgcaagtcttactatttggaaaatcatgggatctcaac
aaaatatgctacaaatcaggtgtcccaataattgagaatggaatgattgcacggatgatt
gagaagctcttcccctgtgttgttgtgactccactggattgtttctgggatggtgccaaa
ttacaaggagggtctgcttatctaccgggccggcgggatattcagtggactaacttagat
cctattcaattgatggaggaactgggtcaatttgcctcactggaaggattcaaggagatg
ttggataaggcagaggttggccaggcctatatggagcggccttgccttgatccttttgac
cctgagtgtcctcctagtgctcccaacagccaaagccagaagaaaccacacatcccttct
gaactcacaggtggctgccatggcttctcccggaaatacatgcattggcaagaggaactc
atcttggggggcacagtaaaagatcctcaaggaaaactgcaaaaagctgaagccctgcaa
agcatgttcctgctgatgagcccacgacaactttatgaacactaccgggatgactacgag
atacatgatatcagctggagcgaggagaaggctgccgctgtgctggaggcttggcagcgg
gaattcgttgaggtggcccaggaatctctgccttcaaattattcacagactattcatgcc
ttctctaccaccacactcagcgatatcatgaagtccttttcagatgtgagtgccatccgt
gtggctggtggttacctgctaatgctagcgtatgcttgcgtcaccctgctgcggtgggac
tgctccaaatctcagggtgctgtgggcctggctggggttctcctagttgccctttcagta
gcagcaggacttggactttgctccttgcttggaatttcattcaatgcagccaccactcag
gtgctgcccttcctggcccttggcattggcgtggatgacatgttcttgctagcacatgcc
ttcacagagactagtcagcatgtccctgtcaaggaacgaactggtgaatgcctacgtcgt
agtggcaccagtgtggcactcacatctgtcaataacatgattgccttcttcatggctgcc
cttgtgcctatccctgcattgcgtgccttctctctacaggctgcagtagtggttgttttt
aactttgccatggtgctgttcatttttcctgccattctgagtttggatcttcacaggcgt
gaaagcaagaggcttgatattctctgctgcttctacagcctctgttctgcccgtgtcatc
cagatccaaccgcaagaatatgctgatgtgaatgacaaccacaccgcacccacttatccc
catggccatccagccctggcgaccagcacacacatcactaccactgtgcaggccttcact
cagtgtgactcctctgggagacatgtagtcactattttaccacccacacagcatgtgttt
accactccctccactctccttcctgccaatcctctgggctcacaaatcttcactcctgcc
agttccactcgggatcttctggcacagctagatgaaagcaaaggagcccaagaatgtgtg
cccttgccgatttgtcgatggaacctttccagctttgctcgtgacagatatgcacccatc
ctgctgcagagccaaactaagggaattgtggtagctctattcctagccctgctgggtctc
agcctctatggtacaaccaaggtacatgatggactgtatctgacggatattgtaccaaga
ggtacaaaggagcatgccttcatttcagctcagttcaagtatttctccttttacaacatg
tttgtggtaacaaatggaggctttgactacccaagctcacaggaagctctttacagcctg
catcaggccttcgctgccatccagtatgtagtacgtgaggagaaccgccagttgccaaag
atgtggctgcactacttccgagattggctacaagatctacaggcagcctttgatcaagac
tgggaagctgggcacatcaccagggaaaattatcggaatggttcggaagatggagttctt
gcttataaactccttatccagacgggcaacaagaaagagcctttcaacttaaatcaattg
acaactcgccgtctggttgatgaaaatgggatcattccccctgatatattttacatctgc
ttgacagtgtgggtgagcaatgacccccttggttttgctgcttcccaggccaacttctat
ccgccacccccagaatggatccatgataaatatgatgctaccggtgaaaatcttcgaatc
ccagctgcacagcctctggagtttgctcagttccccttctacctcaatggccttcaacac
acatcagacttcgtggcagctatccagagtgtgcgtgccatctgtgatgaggtggcccag
acacatggagtatttagctaccccagcggatatccattcctcttctgggagcagtacatt
ggcctgcgtcactggcttctgcaagccatcagcattgtgctggcctgcacatttctggtg
tgcacgctgttgctactcaatccttggactgccagtatcattgtatttgttttggcaatg
atgacagttgagctttttggcatcatgggcttgatgggcatcaaactgagtgcaatccct
gttgtcatcctaattgcttctgtaggcattggcgtggaatttactgtacatgtagctctg
gggtttctcaccgccattggcagccggaacctgcgctccactgtggctttagagcacatg
tttgcccctgtaatggatggtgctgtttccactctgcttggtgtacttatgttggcaggc
tcagaatttgatttcattctgagatatttctttgccgtgcttactatcctgactattctg
gggctacttaatggcctggtactattgcctgtactactttctattattggaccacctgca
gaggtaacaccagcagataatggcagccgcttgccaacaccatcacctgtcccaccgccc
atcaaccatcacagcttctacattcgccaacatggaaatgcttttggtgactcctcagac
tcagaatactactcagagacagttagtgcatcagagactggtgaagatgaccgcagcaca
tatatcatctccccagctcaatcacaaatcttggtcaaagccagcaaaagtcctaatttt
ccccaaatcactgtggtaaaaagctacaagacaagcctagaatcacctttatcattgtgc
agcccggaatggacccaatccagaactcctggtggccatttgccagcagctgtcacagaa
atcaaaagttgtttgcagcagcaagaacaacccaaccacagactagggtctcaattggct
cagtctactcccaaaccccttcagactaactccattactcacagcaccaaaataccacct
tcaggacctggtggcactttcactacagttacagctactgcctcggtgatgttggccttg
cacccacctttgcctggatcttgccggggctatacacatgaggggtttgaatctgatgat
aactctgaaaaaacaggccccaaaccatctgacagtttggaactacaggacctgaagcag
aatcattag
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