Pituophis catenifer annectens (San Diego gophersnake): 139314110
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Entry
139314110 CDS
T11059
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcae03032
]
139314110 (PIF1)
03029 Mitochondrial biogenesis [BR:
pcae03029
]
139314110 (PIF1)
Enzymes [BR:
pcae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
139314110 (PIF1)
DNA replication proteins [BR:
pcae03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
139314110 (PIF1)
Mitochondrial biogenesis [BR:
pcae03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
139314110 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
DEAD
AAA_16
Herpes_Helicase
Paramyxo_C
AAA_5
UvrD_C_2
PhoH
RsgA_GTPase
AAA_7
AAA
AAA_24
MCM
ABC_tran
NACHT
DUF815
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
139314110
NCBI-ProteinID:
XP_070795744
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MQDSELDGRIRCTVAVERLGAAAAPNRLLLRDAWVNLGRNEFRELVLQVTKASGPDRLQN
FPLRRNEMRLFTRFVKDGKSSIRLGPLGSNYVQLLLSNCPPDRLRRFVQTLRIKFEATQH
GGRPVPERTRLLSSLPRTFDTVSPVQVRDLQQASAREALANVTATPTKGQTLPCRSRKRP
LESVDGRQMTEEKQVKKPWLMGSRATLSQEQSRVLNAVLSGKNVFFTGSAGTGKSYLLKK
IVASFPPNGTYVTASTGVAACQIGGITLHAFAGIGSGKASLHQCLELAQRPGVRQQWLNC
RCLIIDEISMVEGEFFDKLEAVARDVRKCEDPFGGIQLIICGDFLQLPPVTKDHKQPKFC
FQAKSWRKCIHLNMELTEVRRQTDKEFISLLNAVRLGRCTEEVTRLLTQTVMQKVERNGI
LATRLCTHKDDVEFTNTMQLQQLAGQLRSFKAVDSDPMLAKTLDAQCPVKSMIELKEGAQ
VMLTKNLDVSQGLVNGARGVVTGFETEGKGLPKVRFLCGVTNIIGLERWVFKGPAGTYLS
RQQLPLKLAWAISIHKSQGMSLDCAEVSLARVFESGQAYVALSRARSLASLRVLDFEAKV
VRANPCVLQFYKELKRDQFLNQISLHSYIYPDKENEKVKGTFIG
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcaagactcggagctggatgggaggattcgctgcacggtggcagtggagcgtctgggt
gcagcggcggccccgaatcggctgctcctgcgggatgcctgggtcaacctcgggcggaac
gagtttcgcgaactggtcttacaggtgacgaaagcttcgggtccggaccgcctccagaac
ttccctttgcggcggaacgaaatgcgcctgttcacacgttttgtgaaggacgggaagagc
tcgatccggttgggtcccttaggctccaattatgtgcagctgctgctctcgaactgccct
ccggatcgcttgcgtcgcttcgtgcagactctgcgcatcaaatttgaagctacccagcac
ggagggcggccggtgcctgagcggacaaggctcctctctagcttgccgcgcacattcgac
acggtgagcccggtgcaagtccgcgatttgcaacaagcaagtgcccgagaagctctggct
aacgttacagccacccccacgaaaggacagactctaccctgcaggtctaggaagcgtcct
ctggaatcagtggatgggaggcagatgactgaagaaaaacaggtgaagaagccttggttg
atgggctcccgagcaacactttcccaggagcagtcaagagtgctgaatgctgtgttgagt
ggaaagaatgtcttcttcacagggagtgctggaactggaaaatcttatttactgaaaaag
attgtggcctcctttcctccaaatggcacttatgtcacagccagcacaggagtggcagca
tgtcagattgggggcatcaccctccatgcttttgcaggtattggatcaggaaaggcctct
ctgcatcagtgtcttgagctggcccagagacctggggttcggcagcaatggctgaattgc
cgctgtctgatcattgatgaaatctcaatggtggagggggaattctttgataaactggaa
gcggtggctagagatgtcaggaaatgtgaggatccatttggaggaatccagcttattatc
tgtggagacttcttacaattgccgcccgttaccaaggaccacaaacagcccaagttctgt
ttccaggcaaagagctggagaaagtgtatccatctgaacatggagttgacagaggttcgg
agacagactgacaaggagttcatttctcttttgaatgctgtccgtcttggcagatgtaca
gaggaagtcaccagactgctgactcaaacagtaatgcaaaaagtggagagaaatggaata
ttggctacacggttgtgtactcacaaggatgatgtagagttcacaaatactatgcagctg
cagcaattagctgggcagctaaggtctttcaaggctgttgacagtgatcctatgttggca
aagactcttgatgcacaatgtcctgtgaagagcatgattgaactcaaggaaggtgcccag
gtgatgcttacaaagaatcttgatgtttctcaaggtctggtgaatggggctcgtggagtt
gtgactggatttgaaactgaaggaaaaggcctgcccaaagtgagatttctttgtggtgtg
actaatattattggcttggaaagatgggtttttaaggggccagcaggcacttacctgagt
cgccagcagctgcccctgaagcttgcctgggccatttctatccacaagagccagggtatg
tctttagactgtgcagaggtttctctagctcgcgtctttgaaagtgggcaggcgtatgta
gcactttctcgagctcgtagtctggcaagtctccgagttttggattttgaagccaaggta
gtcagagctaatccatgtgtactgcaattttacaaggagctgaagagagaccaattttta
aatcagatctctttgcattcctatatttatcctgataaagaaaatgaaaaagttaaagga
acatttattggttga
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