Pituophis catenifer annectens (San Diego gophersnake): 139314208
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Entry
139314208 CDS
T11059
Symbol
NFASC
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139314208 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139314208 (NFASC)
Cell adhesion molecules [BR:
pcae04515
]
Immunoglobulin superfamily
L1 family
139314208 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_5
Ig_DSCAM-DSCAML_C
C2-set_2
DUF6606
Motif
Other DBs
NCBI-GeneID:
139314208
NCBI-ProteinID:
XP_070795869
LinkDB
All DBs
Position
Unknown
AA seq
1344 aa
AA seq
DB search
MVIQRYLLTYMVVVLASYLHNLIRAIEVPRDPSIQDTLPQPPTITKQSAKDYIVDPRDNI
FIECEAKGNPTPTFSWTRNGKFFNVAKDPRVTMRHWSGTLVVDFRSGGRPEDYEGEYQCF
SRNDYGTAISNKIFLHVSKSPLWPKENLDIQEVHEGASLILACNPPPGLPPPAIFWMSSS
MEPIHQDKRVSQGQNGDLYFSNVMKQDAQTDYSCNARFAFTHTIQQKNPYTLRILTKYPY
NEASFRNHTDMYSARGIAERQPSFMYPTGTSSSQMVLRGEDLLLECIASGVPSPDIMWHK
KGGDLPSGRIKLENFNKALHIANISEEDSGEYFCLASNKVGISRHSISVKVKASPYWLDE
PENLILAPGEDGRLLCRANGNPKPSIQWLVNGELLESSAPNPSREVNGDTVMFRDIQSGS
SAVYQCNASNEHGYLLANAFVSVLDVVPRILLPRNQLIKVIQNNRTLLDCPFFGSPIPTL
RWFKNGQGSTLHGGNYKAHENGTLEIIRARKEDQGTYTCVATNLLGKAQNQVRLEIKDPT
RIIEGPKDAIPKKGSTIHLVCQTRHDATLRLTVTWLKDDIPVYFGNRMKKEEDGLTIHGV
SEKDQGYYTCVASTELDKDTARAHLTVLAPSSVNRMTPPPARPERPRDLELTDLAERSVR
LTWIPGDDNNSPITDYIVEFEEDKFQPGTWHNHSRYPGNVNSAILRLAPYVNYQFRVIAV
NDVGSSYPSLPSERYHTNGARPEFNPSGVKGSGTAKNNMVISWMPLNATQVYGPNLKYIV
KWRRRDTRESWNNRTVKGDVSQYTVAPTPIYTPYEIKVQALNDYGIAMEPETVIGYSGED
YPKAAPTDIRLKVVNSTAISLQWSKVYPETIQGQLKEYRAYYWRESSLLKNLWVSKKKQS
MGFIGDRTRGIVSRLFPYSNYKLEMVVVNGRGDGPRSEILEFTSPEGVPSAPRYFRIRQP
NLETVTLEWEHPEHPNGILIGYTLRYQAFNGSKTGRTMVEVFSPNQTKFLLQRTDPISRY
RFNLRGRTQIGEGEPATGESPIPLNEVLPTSDVPTVAATTISETTVPTTITEVVTTTTEV
ITTATTEAVTTTTEAATTTEPAIITTLVASTIAGVGKLPPIWNVKISSNNNWANITWNHT
FDADTEFVVEYSNSNKTVKSSPAKGFLELSDLIPGEKYIVRVFLKGNESVFSSETFHTSP
AYTKNQGDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVRANKDVPLDPDDQKV
DNGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKK
DKEETEGNESSEATSPVNAIYSLA
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggtaattcaaaggtatctcctaacctatatggtcgtggtgctcgcttcatatcttcat
aacctcatcagagccattgaagtcccacgggatccaagtattcaagatacattgcctcag
cctcctacaattacaaagcagtctgcaaaagattatattgtagatccaagagataatata
ttcattgagtgtgaagcgaaaggcaaccccacacccacgttttcctggacacgaaatggg
aagttttttaatgttgcaaaggaccctcgagtaaccatgaggcattggtcaggtacactg
gtagttgacttccgcagtggtgggaggccagaggattatgagggagaatatcagtgtttt
tctcggaatgactacggaacagctatttccaacaaaatattcctccatgtttcaaaatct
cctttgtggccaaaggaaaatttggacattcaagaggttcatgaaggtgcttcacttatc
ttggcatgcaatcctccacctggactaccaccccctgctatcttttggatgagtagctcc
atggaaccaatccatcaagacaagcgtgtttctcaagggcagaatggtgacttgtatttc
tctaatgtcatgaagcaggatgctcagactgactatagctgcaatgctcgctttgctttc
acacataccatccagcagaaaaatccttacaccctcaggatcctgaccaagtatccctat
aatgaagcgtcctttcgaaatcacactgacatgtacagtgcccgaggtattgcagaaagg
caacccagcttcatgtaccctactgggacctcaagcagtcagatggtgctaagaggagaa
gacctcttgctggaatgcattgcctcaggagttccatcaccagatatcatgtggcacaaa
aagggtggtgatctcccatctggcaggatcaagttggaaaactttaacaaggctcttcat
attgcaaatatttctgaggaagattctggggaatatttctgcttagcttccaacaaagtg
ggcattagccgccatagtatctctgtgaaagtgaaagcttccccatattggttggatgaa
ccagagaaccttattttggctcctggtgaagatggaagactgctgtgccgtgccaatggt
aaccccaaaccttcaatccagtggcttgtgaatggagaacttctagaaagttctgctccc
aatcccagccgtgaagttaatggagacaccgttatgtttcgggacatccagagtggcagc
agtgctgtatatcaatgcaacgcttctaatgaacatgggtacctgttagccaatgcattt
gttagtgtgttggatgttgttcctcggatccttctccctcgtaaccaactgattaaagtt
attcagaacaatcggacgcttcttgactgtccgttctttggatccccgattcccacatta
cgatggtttaagaatggccagggaagtacactgcatggtggcaactataaagcacatgag
aatggaactttagaaatcatcagggctcggaaagaagaccagggaacttacacctgtgtg
gctaccaatcttttgggcaaagcacagaaccaggttcgtttggaaataaaagatcccaca
aggatcatagaggggcccaaagatgctataccaaagaaaggttccacaattcacttagtg
tgccagacaagacatgacgccacattacggcttacagttacctggcttaaagacgatatt
cctgtctactttggaaacaggatgaagaaagaagaagatggtttgactatacatggagta
tcagaaaaagatcaaggatattatacctgtgtggctagcactgaactagacaaggatact
gccagagcccatctcactgtacttgctccttcttctgttaaccgtatgaccccaccccca
gcacgtccggaacgtccccgtgaccttgaactaacagacctggctgaaaggagtgtgcgg
ttaacttggattcctggtgatgacaataacagtccaatcacagattatattgtggaattt
gaggaagataaattccaacctggaacttggcataaccattcccgttacccaggaaatgtg
aactccgccatcttgcgccttgcaccatatgtcaactatcagttccgagtaatagctgtg
aatgatgtgggaagcagttatcccagtctgccttctgaacgataccatacaaatggagca
cgccctgaatttaacccttcaggagttaaaggatcaggaacagcaaaaaataatatggtt
atatcatggatgccattaaatgcaactcaagtgtatggccccaatcttaaatacatcgtg
aagtggagaagaagggacacacgggagagttggaacaaccgaactgtaaagggtgatgtc
agtcagtataccgtcgcaccaacacccatctatacaccgtatgagatcaaagtacaagct
ttaaatgattatgggattgccatggagccagagaccgtaattggttactcaggggaagat
tatcctaaggctgcccctactgatattaggctcaaagttgtaaacagtacagcaatcagc
cttcaatggagtaaagtgtacccagaaaccatccagggacagctcaaggaatatagagct
tattactggagagaaagtagtttgctgaagaatctatgggtctctaagaaaaagcagtct
atgggttttattggagaccggacacggggcatagtgtcccggctgtttccttacagcaac
tacaaattggaaatggttgtagtcaacgggagaggagatgggcctcggagtgaaattctg
gaattcacatcacctgaaggagtacccagtgccccaagatatttccgaattcgtcagcca
aacttggaaaccgtcaccttggaatgggaacatcctgaacatcccaatggcattcttatt
ggatacactcttagataccaagcctttaacggatccaaaactggcagaacaatggtagag
gtcttctctcctaatcagacaaagtttttacttcagaggacggatcctatctcacgctac
aggttcaatctgcgtggcaggacacagattggagaaggtgagcctgccacaggggaatct
ccaattccactgaatgaagttcttccaacctcagatgttccaactgtggccgcaaccacc
atttcagaaactactgtcccaaccaccattaccgaagttgtaaccaccaccacagaagtt
ataaccactgccaccacagaagctgtaaccaccaccacagaagctgcaaccactacagag
ccagcaatcatcaccacacttgttgctagtacaatagctggtgttggaaagctgccgccc
atctggaatgtaaaaatttcatctaacaataactgggcaaacatcacctggaaccacaca
tttgatgctgacactgaatttgtggttgagtatagcaacagtaacaaaacagtgaaatct
tcccctgctaaaggttttctggagctgagtgatctgattcctggtgagaagtatatagtg
cgggtttttctcaaaggcaatgagtctgtcttctcaagtgaaacctttcatacaagtcca
gcctatactaagaatcaaggggacattgcaactcaaggctggtttattggactgatgtgt
gccatcgctctcctggtcctgattttgctgatagtttgctttattaagaggagcagagga
ggaaaatatccagtgcgagcaaataaagatgtgcccctcgatcctgatgatcagaaggta
gataatggatcatttgattacagtgatgaagacaacaagccactgcaaggcagtcagacc
tccttagatggcacaataaagcaacaagaaagtgatgacagtttggtggactatggagaa
ggaggtgaaggacagttcaatgaagatggctcctttattggccagtacacagttaagaag
gacaaagaagagacagaaggcaatgagagctcagaagccacatcaccagtaaatgctatc
tattccctggcataa
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