Pituophis catenifer annectens (San Diego gophersnake): 139314254
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Entry
139314254 CDS
T11059
Symbol
UBR1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139314254 (UBR1)
Enzymes [BR:
pcae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139314254 (UBR1)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
139314254 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
Motif
Other DBs
NCBI-GeneID:
139314254
NCBI-ProteinID:
XP_070795935
LinkDB
All DBs
Position
Unknown
AA seq
1759 aa
AA seq
DB search
MADEGDGAGRMAGTSGAAPVNPSELAGWWDEKLDFHAAFLQHLAKVVPSIYCDEMDPLSQ
KEEEMAQKMILYPLEWHLFGEDPNTCLEKLRQIGTSQLCGKVFKGGETTYSCRDCAIDPT
CVLCMDCFQNSIHVNHRYKMHTSTGGGFCDCGDTEAWKTGPVCSKHEPEGGDNTEENVEC
QLNEEVIAQARKIFPSVIKYIVDMTLWEEEKELFSELMINREKPDKHYCVLFNDEHHSYD
HVIYSLQRTLGCDLGEAQIYTTAIDKEGRKAVKKGSYVVCQETKEEIKKHSNNVSQGPLN
VMVLHADVMAHQKFALRLGSWLNKLMSYSSDFRQIFCKICLKEEADSGKPCLISILMLWD
AKLYKGARKILHELIFSTFFMEMEYKKHFAMEFVKHYKALQREYISDDHERQFSVTALSV
QIFTVPTLARHLIEKQNVITVITETLLEELPKYLDKNGKFNFQGYSQEKLSRVYAVIYDL
KYILISKPTVWTNKLRQQFLEGFKSFLKILTCMQGMEEIKRQVGQHIEVDPDWEAAITIQ
MQLKNILLMFQEWCACDEELLITAYKECHAAVMKCNNSGSNYSRDKAVINLCGQTLECKR
FKVSMDPVSIHLPLSRMLAGLHIQLSKTGIISRLEEFFSSKEFQVQLLVEYPLRCLALVA
QVAAEMWKRNGLSLISQMFYYQDVKCREEMYDKDIILLQIGAAFMDPNSFLLLVLKRYEL
LNAFKKTVPTKHQDFNKKCNTLIEEMLQVLIYVVGERYVPGVSNVTKDYVTMREIIHLLC
IEPMAHSAIAKSLPKDENNETGLEKVIHKVALFKKPGVSSHGVYELKEECLKEYNVFFYH
YTKTQHNKAEHMEKKRRVQENKDEALPPPTPPEFSPAFRNVVNVLNCDIMMLILRTILQK
ALELENHMWTEAMIQMVLHLLSLGLLEEKRQLEEIPEEEVTFDFYHKASRMGSSALNAMN
ILMILEKLKGIQQLESQKDMIIWVLRMFETIKCLREKSSFPMAVTTPMSESTKVNEMQKI
QEKEKAERKRKAEVARLHRQKIMAQMSALQKNFIETHKLLYDNTQETPGRDAMEVERFIL
PHYQVRIALGPKRGQSVTEKERLTCILCQEEQEVMLENAAMVLSACIQKSTALTQCRGKE
LELVGEDTDPLFMDPDLSCGTHTSTCGHVMHAACWQKYFEAIQLNSRQRHHVEQVFDLGN
GEYLCPLCKSLCNTVIPIIPLQEEKINSEDAEMVAQLLSLSKWLEIVMARIAGYNKKSNK
ETKIAPSLLNKEMEDASSEFHSILSFGVQPLIEYSNSIKEMVVLFATAIYRIGLQVAPNE
VDPRIPMMTWSTCAFTIQCLENLLEDEGKALFGSLQSRQHSGLKALVQFAAVQRTTVPPH
VIQQHLVRLLGVLLPNLKVEDTPSLLDVDLFHVLVGSVLSFPSLYWEDNVGLQPSAISSA
CNQLYLFHLFTMAHITQIILTTTADGVCSSAQVLNDSEEARAAEAFCKEICRYTNRCYSL
QVPGWYLWDCIKKGITPYLRCAALFFHYLLAVPAPEELSSVSEEDQFKALCDYLSLPTNL
FMLFQEYWNIVEPLLQRWCTDPAVLCFLEGKSIAIRYPRERNKLIELPEDYSCLLNQGSQ
FRCPRSSDDETKHPVLCLFCGAMLCSQNSCCQVLVNGEELGACNSHAVSCGAGVCIFLKI
RDCRVLLIGGKNRGSFCPAPYLDEYGETDPNLIRGNPLHLSHERYRKLHLLWRQHCIIEE
IARSQETNHVFLGFNWHLL
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaaggcgacggcgcgggaaggatggctggaacgagcggcgctgcccccgtg
aacccctcggagctggctgggtggtgggatgagaagcttgattttcatgctgcctttctt
caacatttggcaaaagtggttccaagcatatattgtgatgaaatggaccctctatcacag
aaagaggaagaaatggcccaaaaaatgattctttatcctttggagtggcatttatttgga
gaagatccaaatacctgtctagaaaaactaagacagattggtacctcgcagctgtgtgga
aaagtatttaaaggtggagagacaacgtattcctgcagggattgtgcaattgatccaact
tgtgtactttgcatggattgcttccagaacagtattcatgtaaatcatcgttacaagatg
catacttctactggaggaggattttgcgactgtggggatacagaagcatggaagactgga
ccagtgtgttcaaaacatgagcctgaaggaggagataatactgaagagaatgtggaatgc
cagttgaatgaagaggtaatagcacaagcaaggaaaatcttcccttcagttataaaatac
attgttgatatgactctttgggaagaggagaaagagctgttttcagagcttatgattaat
agagagaagccagacaaacactattgtgtccttttcaatgatgagcatcattcttacgat
catgttatctacagtctacaaagaactcttgggtgtgaccttggagaagcccagatatat
actactgcaatagataaagagggtcgaaaggctgttaagaaggggtcatatgttgtttgt
caagaaacaaaagaggagattaagaaacattcaaataatgtttcccaaggtccccttaat
gtgatggttcttcatgcagatgtaatggctcatcagaaatttgctttgcgtcttggttct
tggttaaacaaacttatgagctattcaagtgattttcgtcagatattctgtaaaatatgt
ttaaaagaagaagctgattcagggaaaccttgtctgataagcatattgatgctgtgggat
gcaaaactttataaaggagcaagaaagatcttacatgaactaatcttcagtacttttttt
atggaaatggagtataaaaaacattttgctatggaatttgttaagcattacaaagctttg
cagagagaatatatcagtgatgatcatgaaaggcagttttctgtgacagcactttcagtt
cagatattcactgtaccaacattggcccgccatctcattgaaaagcaaaatgtcatcaca
gtcataacagagacccttctagaagaactaccaaaatatttggataaaaatggcaaattc
aatttccagggttacagccaagagaaattgagccgagtatatgcagttatatatgatctt
aagtatatcttaatcagtaagcctactgtgtggacaaataaattgcgacaacaatttttg
gaagggttcaaatcttttctgaaaattctgacttgtatgcagggaatggaggaaataaag
cgacaagttgggcagcatattgaggtggatcctgactgggaagcagccattacaatccag
atgcagttgaagaacattctcttgatgtttcaggagtggtgtgcctgtgatgaagagctc
ttgattacagcttataaggagtgccatgcagcagtaatgaaatgtaacaactctggcagt
aattattcacgggacaaagcagtgatcaatttatgtggccagactttggaatgcaaacgg
ttcaaggtatcgatggatcctgtgagcattcatctcccattgtctaggatgctagctggt
ctgcatatacagctgagcaaaactggaataatttcaagacttgaagagtttttttcatcg
aaagaattccaagtgcagctgttggtagaatatcctttgcgctgcctagcattggttgct
caggttgctgcagaaatgtggaaaaggaatggactgtctctaatcagccagatgttttat
tatcaggatgttaaatgtagagaagaaatgtatgataaggacataattctcttgcagatt
ggggcagcatttatggatccaaatagttttcttttgcttgtcctcaaacggtatgaactg
cttaatgccttcaagaagacagtgccaactaaacaccaggatttcaataaaaaatgtaat
accttgatagaagaaatgcttcaagtactcatctatgttgtaggagaaagatatgtccca
ggagtaagtaatgtgacaaaagattatgtgacaatgcgagaaattatccatctgctgtgt
attgagccaatggcacatagtgctattgcaaaatctttgcctaaagatgaaaacaatgag
actggtttggagaaggtgattcacaaagtggccttgttcaaaaaacctggtgtgtcaagc
catggagtttatgaattgaaggaagaatgcctcaaggagtacaatgtatttttttaccat
tataccaagactcagcacaataaggctgaacatatggaaaagaaaagaagagtacaagaa
aataaagatgaagcactcccaccacctacacctccagaattcagtcctgctttcagaaat
gtggtgaatgttctcaactgtgatatcatgatgcttattcttagaactatcctgcaaaaa
gcactagagctggaaaatcacatgtggacagaagctatgatacagatggtccttcacctc
ctttctttgggtttacttgaagagaagcgtcagttagaggagattccagaggaagaagtg
acctttgacttctatcataaagcttccagaatgggaagctctgctttgaatgcaatgaac
atccttatgattttggaaaagctgaaaggaattcaacaactggaatcacaaaaagacatg
atcatctgggtactacggatgtttgagacgataaaatgcttgagagagaagtcttctttt
cccatggccgtcactacacccatgtcagaatctacaaaagttaatgagatgcagaaaatt
caggagaaagagaaggctgagaggaagaggaaagcagaagttgcccgattacatcgccaa
aagatcatggctcagatgtccgctttacagaaaaatttcatagaaactcacaagctcttg
tatgacaacacgcaagaaacacctggaagagatgctatggaagtagagaggttcatactc
ccacattatcaagtcagaattgccttggggccgaagcgaggccagtctgtcactgaaaaa
gaaaggttgacatgtatcctgtgtcaggaagaacaggaagtaatgctagaaaacgctgcc
atggttttatctgcctgtatccagaaatccactgccttaacccaatgtagagggaaagaa
cttgaacttgtaggagaagacactgatcctcttttcatggatccggacttgtcatgtgga
acacataccagcacttgtggtcatgtgatgcatgctgcttgctggcagaaatactttgaa
gccattcaactgaattctcgacaacgtcatcatgttgaacaggtttttgatttagggaat
ggcgagtacctttgcccactatgcaaatccctgtgcaatactgtgataccaattattcct
ttgcaagaagagaagataaacagcgaggatgcagaaatggtagctcagcttctgtctttg
tccaagtggctagagattgttatggctcggatagctggttacaacaagaaaagcaataaa
gaaaccaaaattgctccatctttacttaataaagaaatggaagatgcttcatctgaattc
cattctatacttagctttggagttcagcctttaattgaatattcaaacagcattaaagag
atggtggttctctttgccacagcaatttatagaattggattacaagttgctcctaacgaa
gttgatccacgtattcctatgatgacttggagcacttgtgcttttacaatccagtgttta
gaaaaccttctagaagatgagggcaaggctttatttggctctctacaaagtagacagcac
agtggtcttaaagcactggtacaatttgcagctgttcagaggactacagtacccccacat
gtgatccaacaacatcttgtacgtctcctaggagttcttttgcccaatttaaaagtggaa
gacacaccatctcttttagatgtagacctcttccatgttttggttggatctgtgttatca
tttccatctttgtattgggaggataatgtaggcttgcaaccttcagctatcagctcagct
tgcaatcaactctacctcttccatttgtttactatggcccacataacccaaattattctt
actacaacagcagatggagtttgttcctctgctcaggtactgaatgatagtgaagaagcg
cgtgctgctgaagcattttgcaaagaaatttgcagatacacaaatcgttgttacagcttg
caagttccaggttggtatttgtgggattgcataaagaaaggcatcaccccctacctccgg
tgcgctgctttattcttccattatctgctggcagtacctgcacctgaagaactttcatcc
gtttcagaggaagatcagttcaaggcactttgtgattatctgtctctacctaccaatctc
ttcatgcttttccaagagtattggaatattgtggagcccttacttcaaagatggtgcacg
gatcctgctgtgctttgcttcttggaaggaaaaagtattgcaataagatatccaagggaa
agaaataaattgatagagcttccagaagactacagctgccttttgaaccaaggatctcaa
tttaggtgccctcgatcttctgatgatgaaaccaaacatcctgtcctatgtttgttttgt
ggggctatgttgtgttctcaaaacagctgctgccaggtgctagtaaatggagaagagttg
ggagcttgcaattcacatgcagtttcctgtggtgctggagtttgcatttttctcaaaatc
agagactgcagggttctgctgattggtggcaaaaatagaggttctttctgtcctgcccct
tatctagatgaatatggagaaaccgatccaaatctgataagaggcaatcctctgcacctg
tctcatgaacgatatcggaagctccacttgttgtggcgacaacattgcatcatagaagag
attgctcgaagccaggaaactaatcatgtctttttgggatttaattggcacctgctctga
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integrated database retrieval system
