Pituophis catenifer annectens (San Diego gophersnake): 139314485
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Entry
139314485 CDS
T11059
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04510
Focal adhesion
pcae04512
ECM-receptor interaction
pcae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139314485 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139314485 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
139314485 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pcae00535
]
139314485 (COL9A3)
Proteoglycans [BR:
pcae00535
]
Extracellular matrix (ECM) proteoglycans
Others
139314485 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
139314485
NCBI-ProteinID:
XP_070796228
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MPGPPGKAGSRGDRGHQGFRGPKGDAGPPGPNGAAGSAGPRGEPGLPGKNGRDGAPGLDG
EKGTAGRSGAPGEKGPHGLPGLPGSAGTKGEKGQLGSPGEMGESGPSGEPGVPGNQGVPG
ERGEAGPRGSPGQPGLQGPMGAAGVRGFQGRAGPSGELGRPGATGLRGESGEQGPTGVSG
PKGNQGIAGTDGLPGSKGELGPFGSPGQKGEAGERGEPGHKGVHGPNGTAGLPGVPGHPG
KMGLQGEQGIPGIVGKPGPPGKEASEERIRELCDGMISEHVAQLAANLRKPLAPGLMGKP
GPPGPPGPAGAMGTIGHPGARGPPGYRGPPGHLGIPGPRGDSGEKGDNGVTGKGVDGPVG
DQGPQGPPGVPGIRKDGRNGAPGEPGLPGDTGRPGSAGAQGAPGPCDTSACMGAAARGIF
KNRKSA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgccagggcctccagggaaagcggggtcccgtggtgacagaggccatcaaggtttccga
ggtccaaagggtgatgcaggtcctccaggtccaaacggagctgctgggagcgctgggcct
cgcggagaacccggcctacctggaaaaaatggaagagacggagcacctggacttgatggt
gagaagggcactgccggtcgttctggtgctcctggcgagaaaggccctcacggactccct
ggactacctgggagtgcaggcactaaaggagaaaagggccagcttggaagccctggagaa
atgggagagtctggtccttcaggagaaccaggtgtacctggaaatcaaggtgtccctggt
gagagaggtgaagctggcccaagaggatctcctggacaacctggtctacaaggacctatg
ggagcagcaggtgtaagaggtttccagggtcgtgcaggaccgagtggggaactgggccga
cctggtgccactgggctacggggtgaatccggtgagcagggtcctactggggtttcggga
cccaaaggtaaccagggcattgctgggacagatggacttccaggaagtaaaggagaactg
ggcccctttggatctcctggacagaaaggggaagcaggagaaagaggagagcctggccac
aaaggagtccatggccccaatggaactgctggactcccaggagttccaggccatcctggc
aaaatgggtttacaaggagagcaaggaatccctgggattgtgggaaaaccaggccctccg
ggaaaagaagctagtgaagaacgcatccgagaactctgcgatggaatgatcagcgagcat
gttgcccagttagctgctaatttaaggaaacccttggctcctggactcatggggaagcct
ggcccccctggacctccggggcctgctggggcaatggggaccattggacatcctggggct
cgtggcccacctggatacaggggacccccagggcatttgggaattcctggtcccagaggg
gactcaggtgagaagggagacaacggagtcactggcaaaggggttgatggacctgttgga
gatcaaggaccgcaaggaccaccaggcgttcctggaatcaggaaagatggtcggaatggt
gcgcccggagagcctgggttaccaggggacactggaagaccaggctcagctggagcacaa
ggagctccaggaccttgtgacacgtctgcctgtatgggagctgctgctagagggatattc
aagaatcgtaaatctgcatga
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