Pituophis catenifer annectens (San Diego gophersnake): 139314504
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Entry
139314504 CDS
T11059
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139314504 (SCRIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
139314504
NCBI-ProteinID:
XP_070796256
LinkDB
All DBs
Position
Unknown
AA seq
1697 aa
AA seq
DB search
MLRCMPPLWRCNRQVETLDRRHCSLQAVPDDVYRYSRSLEELLLDANQLRELPKPFFRLL
NLRRLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSR
LPEGFTQLRNLGHLALNDVSLQSLPNDIGNLANLVTLELRENLLKCLPASLSFLVKLEQL
DLGGNDLEVLPDTLGALPNLRELWLDRNQLSCLPPELGNLRRLVCLDVSENKLEQLPDEI
GGLVVLTDLLLSQNLLEMIPDGIGQLKQLSILKVDQNRLTEVTEAIGDCANLSELILTEN
LLQSLPRSLGKLTKLTNLNVDRNRLMVLPAEIGGCSSLNVLSLRDNRLEWLPPELAGTIE
LHVLDVAGNRLQHLPFALTNLHLKALWLAENQSQPMLKFQTEEDEKTGEKVLTCYLLPQQ
PSASSENLLQNSLDESWAEANPNRVSVIQFLEDSQIEEEEEEEAGTEKRGLQRRATPHPS
ELKSMKKGMEVRRSEASAAARRDSSNSEGKRLSAASNHSEDSRVSGSILSASGGPEEGQE
AQQPEGTAAGAQLEEGGKLVSEEKGQAPPEEVATLEETAEDQEEELELEYSEPTVHFAED
TLVRSEDEETLPFPTGKQRLIRKDTPHYKKHFRITQLPRPEAVVALLQGFGASGGPQEEE
EEKPEQEEASEQTGWGQEEAASEGGSAVPPSVKGVSFDQANNLLIEPARIEEEELALMIV
RQTGGLGISIAGGKGSTPYKGDDEGVFISRVSEEGPAAQAGVRVGDKLLEVNGVSLHGAE
HHVAVEALRGSGSSVSMTVLRERMVEPENAITVTPLRPEDDYSPREWRGGLHLAVGAKDT
TPTERLSACLVRNERGLGFSIAGGKGSTPYRPGDTGIFISRIADGGAAHREGTLQVGDRV
ILINGVDMMEARHDQAVALLTASPPTIALLVEREMIPQEKDLPVGLRGLQAPSPPPLPPQ
GDALLEEAAACPPRSQLPEGMESQYPTEEVCLVKAGGPLGLSIVGGSDHSSHPFGIHEPG
VFISKVILHGLASRSGLRVGDRILEVNGVDLRQATHQEAVSALLSSDPELRMVIRRDPPP
PGMEEICIEKRPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSAGAAARDGRLRMGL
RILEVNQQSLLGMTHTEAVQVLRAVGDRLLVLVCEGFDPKAMAALEMSPGIIANPFAAGI
GRKNSLESISSIDRDLSPEEADLLQKDGGSAEPLQLDYRTLAALPSSSSRLQKGPRGGLV
MGEAESAQREPPSSQQTKPGRIQPVSRLRLTSALGPTEGQSSPSPFQQPELASSPNGLPQ
QAGPLSLSEDLPLSTKQAYKAMAAVPESQLPLEPEELPGQRSLDQAPPVSSESPWLGGLH
SPEQRTFRERQKYFELELKQLPPPSGKPLKRVSLVGEEDLKKMKEEEAARKLQQKRIQLL
EEEEEEEEEEAQSQGPPGMGAPSSIFIEGVEYRVEKQNGNSLPPTAWMSPVCARGGEPGV
PVRTAKAERRHQERLRVQSPELLAAPEKELSPAERRALEAEKRAMWRAARMKSLEQDALK
AQMVIAKSRESKKRGMLEQLAESPSPAPTPSPTPLEDRASWGAVSPGRLSLPEKKFLYRE
FAAIPSSKPVCELQIPDGRESCKRLGSISSSSGRQDHGGTPEPLMTHGPSVGQELGLFGD
ERNLQQSQHSLEAAVPT
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgctgcatgccgccgctgtggcgctgcaaccggcaggtggagacgctggaccgg
cggcactgctcgctgcaggccgtgcccgacgacgtctaccgctacagccgctcgctggag
gagctgctgctcgacgccaaccagctccgcgagctgcccaagcctttcttccgacttctg
aacctgcgcaggctgggcttgagtgacaatgagatccagcgcctccctcccgaggtggcc
aattttatgcagctggtggagctggatatctcccgcaacgacattccagagattcccgag
agcatcaagttctgcaagtccctggagattgccgacttcagcggaaaccccttgtccagg
ctccctgaaggcttcacccagctgcgcaacctgggccacctggccttgaacgacgtctcc
ttgcagagcctgcccaatgacattggcaacttggcaaacctggtgacgttggagcttcgt
gagaatctgctgaagtgtctcccggcttcactctccttccttgtgaaattagagcagctg
gaccttgggggcaacgatcttgaagtgttgccagatactctgggcgccctgccaaacctg
cgtgagctctggctggacaggaaccagctctcctgccttcccccggagctgggcaatctg
cgtcggctggtctgcctggatgtctccgagaacaagctggagcagctgcctgatgagatt
ggtggcttggtggtgctgacagacctgcttctgtcacagaacttgctggaaatgattccc
gacggcattggccagctgaagcagctctccattctgaaggtggaccagaatcgtctcacg
gaggtgaccgaagccattggggactgtgcaaacctgtcggagcttatcctgaccgagaac
ttgctacagtccctccccaggtctctggggaaactcaccaagctgaccaacctcaacgtg
gaccggaaccgcctgatggtgctccctgcagagattgggggctgcagcagcctgaatgtc
ctctcccttcgagacaaccgcctggaatggctgcccccggagcttgctggcaccattgag
ctgcacgtcctggacgtagcaggcaaccggctgcaacacttgcccttcgccctgacgaac
ctgcacctgaaggccctctggctggcagagaaccagtcgcagcccatgctcaagttccag
acggaggaggatgagaagacgggggagaaagtgctcacctgctacctgctgccccagcag
ccatctgccagctcagagaacctcctgcagaacagcctagatgagagctgggcagaggcc
aaccccaaccgggtcagtgtgatccagtttctggaggactctcaaatagaggaggaagag
gaggaggaagctggcactgagaagagggggctgcagcgcagggccactccgcaccccagc
gagctgaagtccatgaagaagggaatggaagtgcggcgcagtgaggcctctgctgcagct
aggcgagactccagtaactctgagggcaagagactgagtgccgcctccaaccacagcgaa
gactctcgtgtctctggcagcatcctctctgccagcggcggcccggaggaggggcaagag
gcgcaacagccagagggcacagcagcaggggctcagctggaggaaggggggaagctggtg
tccgaggaaaaaggccaggcgcccccagaggaggtggccacgctggaggagacggcggaa
gaccaggaagaggagctggagttggagtactctgagcccacggtgcacttcgcggaggac
accctggttcgcagtgaggacgaggagaccctcccgttccccacaggaaagcagcggctg
atccgcaaggacacgccccactacaagaagcacttccggattactcagctgccccgcccg
gaggcagtggtggccctcctgcagggctttggggccagtggtggcccccaggaggaggaa
gaggagaagccagagcaggaggaggcctcggagcagacagggtggggccaggaagaggca
gccagcgaggggggctcagcggtcccaccctcggtcaagggggtgtcgtttgatcaagcc
aataatctgctgattgaacccgctcgcattgaggaggaagagctggctctgatgatcgtg
cgacagacgggcggcctgggcatcagcattgcagggggcaaaggctccaccccttacaag
ggagatgatgagggcgtcttcatctcccgtgtgtcggaggagggcccagcagcacaggcc
ggggtacgcgtgggggacaagctcctggaggtgaatggggtgtcccttcatggcgctgag
catcatgtggcggtggaagccctccggggctcgggcagcagcgtctccatgacagtgctg
cgggagcggatggtggagcctgagaatgccatcacagtgacgccactgcggcccgaagat
gattacagcccacgggaatggcgtggagggctgcacttggccgtgggggctaaggacacc
accccgactgagcgcctctcggcctgcctggtgcggaatgagcggggcctgggcttcagc
attgctgggggcaagggctccaccccgtaccggccaggcgacacggggatcttcatctcc
cggattgcagacgggggggccgcccaccgggaaggaacgctgcaagtgggcgacagggtc
atcttgatcaatggggtggacatgatggaagcccggcacgatcaggctgtagcactgctg
actgcctccccacccaccattgctctgctggtagaaagagagatgataccccaagagaag
gacctgcccgtgggactgcgagggctccaggcgccttcgccgccgcctctgcccccccag
ggagacgccctgctggaggaggcggcagcgtgccctcccaggagccagctgcctgaaggc
atggagagccagtaccccaccgaggaggtctgcctggtcaaggccggggggccccttggc
ctcagcatcgtgggaggcagtgaccactccagccaccccttcggcatccacgagccggga
gtcttcatttccaaggtcattctgcacggcctggcctcccgcagcggcctgcgtgtgggg
gaccggatcctggaagtgaacggtgtcgacctgcgccaggcaacccaccaagaggccgtc
agcgctctgctctccagcgacccggagctacggatggtgatcaggcgagaccctcccccg
cctggcatggaggagatctgcattgaaaagaggcctggagagaagctgggcatcagcatc
cgaggcggcgccaagggccacgcggggaacccctttgaccccaccgacgagggaatcttc
atctctaaggtcagctccgccggggcagcagcccgtgatggccggctgaggatgggcctg
cgcatcctggaagtgaaccagcagagcctgctgggcatgacccacacggaggcggtccag
gtcctgcgggccgtgggggatcggctgctggtgcttgtttgcgagggctttgatcccaaa
gctatggctgcccttgagatgtctccgggaatcattgccaacccttttgcggccggcatt
gggcgcaagaacagcctggagagcatctcgtccattgacagggacctcagcccagaagag
gcagatcttcttcagaaggacgggggcagcgcagagcccctgcagctggattaccgcacc
ttggcagccctgcccagcagcagcagccgtctccagaaaggcccccgcggcggtctggta
atgggggaagccgagtctgcccagcgagagcctcccagcagccagcagaccaagcccggg
agaattcagccagtctctcgcctacgcctgacctcagccctgggccccacggaggggcag
agcagtcccagcccttttcagcagcctgagctggcctctagtcctaacggtctgcctcag
caggccggacccctctcactaagcgaggacctccctctcagcaccaaacaggcatacaag
gccatggccgctgtcccggaatcacagctgccgttggagccggaggagctgccaggccag
agaagccttgatcaggcaccgcccgtctcttccgagagcccatggctgggtggcctgcac
agcccggagcaacggaccttccgcgagaggcagaagtactttgagctggagctgaagcag
ctgccaccaccttctgggaaacccctgaagcgagtctctctggtcggggaggaagacctg
aagaaaatgaaggaggaagaagcagctcggaaactccaacaaaagcgaatccagctgctg
gaggaggaagaagaagaggaggaggaggaggcacaaagccagggccccccaggcatgggc
gctccctccagcatcttcattgaaggcgttgagtacagagtcgagaagcagaatggaaac
agtctccccccaaccgcctggatgagtcctgtctgcgccagagggggggagccaggggtg
ccagtccggacagccaaagccgaacggcggcatcaggaacgcctgcgggtgcagagcccg
gagctgctggccgccccggagaaggagctctccccagccgagcgccgagctctggaagcg
gagaagcgggccatgtggcgagcagcaagaatgaagtctctggagcaggatgccctcaag
gcccagatggtgattgccaaatccagggagagcaagaagcgtggcatgttggagcagctg
gcagagtcgccctccccggcccccacgccttcccccacacccttggaggaccgtgcttcg
tggggtgcagtttcaccaggccggctgtctctgcctgaaaagaagttcctctacagggaa
tttgcggccattccttcttccaaacctgtatgtgaactccagattccagatgggcgagaa
tcctgcaaacgtcttggcagcatcagcagcagctcagggcgtcaggaccatggtgggacg
ccggagcccttgatgacccacggaccttctgtgggccaagagctggggctctttggcgat
gagcgcaacctccagcagtcccaacacagcttagaagccgccgtcccgacataa
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