Pituophis catenifer annectens (San Diego gophersnake): 139314637
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Entry
139314637 CDS
T11059
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139314637 (SNTB1)
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
139314637
NCBI-ProteinID:
XP_070796456
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MAVAAAGGGGSGVGRLQRSGALEVLVRDRWHRVLVTLSGEALVLSGEESGGAAAYNGIGA
ASAGNGTFCGRGAGASKAATASSCPLPGAGSPESPSGSSYNSSGNNNGGSPKTAAAGVRT
ALTDLPEQVPDAVSNQKRCVKVLKQEMGGLGISIKGGKENKMPILISKIFKGLAADQTQA
LYVGDAILTVNGADLRDATHDEAVQALKRAGKEVVLEVKYMREATPYVKKGSPISEIGWE
TPPPESPRLGNPTIDPMLPLSLNIHRDKRTIPLKMCYVTRNMAMLDPENRIVEVHSPDAK
HILVLRSKDASTAQAWFYAIHSCISELIPKVISEVKDQLGKAGIAGGREIRHLGWLAEKV
LGENEKPGKAVLVALTEKDLLIFESMPRIKEAWFTPLHSYPLLATRLVHSGPGKGSPQSG
VDLSFATRTGTQQGIESHLFKTETSRDLSLWTRSLVQGCHNAAELSVEVTTACTYKNQEC
RLTIHYDHGFSLTTEPQVGAFPKTIFQYPYEKLKSSSDDGIRMLYLDFGGKEGEIQLDLH
SCPKPIVFIIHSFLFAKITRLGLVA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggccggaggcggcggcagcggtgtcggccggttgcagcggagcggc
gcgctggaagttttggtgcgcgaccggtggcaccgggtgctggtgaccctgagcggcgaa
gcgctggtgctgagcggcgaggaaagcggaggcgccgcggcttacaacggcatcggggca
gcctcggcgggcaatggaactttctgcggcagaggagctggggcgtcgaaggcggcgaca
gcctcttcttgtcccctgcccggcgctggctcgcccgaatcgccgtcggggagcagctac
aacagcagcggcaacaacaacggcgggagccccaagacggcggcggcgggagttcggacg
gcactgaccgacttgcccgaacaagtgcccgacgccgtctccaaccagaagcggtgcgtc
aaggtgttgaagcaagagatgggcggtttgggcatcagcatcaaagggggcaaagagaac
aagatgcccatcctcatcagcaagatctttaaaggcttggcggccgaccagacccaagcg
ctctacgtcggcgatgccatcctgaccgtcaacggcgcggatttgcgcgatgccacccac
gacgaagccgtgcaggcgctcaagagggcgggcaaggaggtcgtgctggaagtgaaatac
atgcgagaagccaccccctatgtgaagaaaggttctcctatttctgaaattggatgggaa
actcctcctcctgagtccccccgtttgggcaacccaaccatcgatcccatgttgccactg
tctctcaacatccaccgagacaaaaggaccatcccactcaaaatgtgctacgtgacgcgg
aacatggctatgttagatccagaaaacaggattgttgaagttcattcaccggatgccaag
cacatcttggtgctaaggagtaaagatgcgagcactgcccaggcctggttctatgccatc
cactcctgtatcagcgagctcattcccaaagtcatctcagaggtcaaagatcaactgggt
aaagcaggaatagccggaggccgagaaattaggcacttgggttggctggcagaaaaggtg
ctgggagagaatgagaaacctgggaaagctgtattggttgccttgacagagaaggacctc
ttgatatttgaaagcatgccacgcatcaaggaagcttggtttactccactgcattcctac
cctctcttagctaccaggttggtacattcaggacccgggaagggctctccacagtctggg
gtagatttgtcgtttgccactcgaacgggcacgcaacaagggattgagagccaccttttc
aaaaccgagactagccgagacctttcactgtggaccaggagcctagtccaaggttgccac
aacgcagctgaactctccgtagaagtcacaacagcttgcacgtacaaaaaccaggagtgc
cgtttgaccatccattatgaccatggattttccctcaccaccgaaccccaagttggtgcc
tttcccaaaaccatcttccagtatccctacgagaagctaaaatcgtcttcagacgatggg
attcggatgctctatttggattttggaggaaaggaaggtgaaattcaactggaccttcat
tcctgcccaaagccgattgtattcatcattcattcattcctttttgccaagattacaaga
cttggattggtagcataa
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