Pituophis catenifer annectens (San Diego gophersnake): 139314642
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Entry
139314642 CDS
T11059
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139314642 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcae01002
]
139314642 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcae03021
]
139314642 (TAF2)
03036 Chromosome and associated proteins [BR:
pcae03036
]
139314642 (TAF2)
Peptidases and inhibitors [BR:
pcae01002
]
Metallo peptidases
Family M1
139314642 (TAF2)
Transcription machinery [BR:
pcae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139314642 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
139314642 (TAF2)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
139314642 (TAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1_N
Peptidase_M1
SR-25
Motif
Other DBs
NCBI-GeneID:
139314642
NCBI-ProteinID:
XP_070796462
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MNRKKGDKGFESPRPYKLTHQVICINSINFQRKSVVGYVELTIFPTVANLNRIKLNSKQC
RIYRVRVNDLEAAFIYNDPTLEVCHSESKQRNLNYFSNAYAAAVSAVDPDAGNGELCIKV
PSELWKHADELKVLKIHINFSLDQPKGGLNFVVPNVEGSLAERGAHVFSCGYQNSTRFWF
PCVDSYSELCTWKLEYTVDATMVAVSNGDLVETVYTHDMRKKTFHYTLPIPTAASNISLA
IGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFVD
EAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAEALAQQFFGCFISRMSWSDEWVL
KGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGGGKEKDNPASH
LHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQS
HMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSSVVKFYGSFAFNRKRNVLELEIKQ
DYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGE
EVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQEESILALQ
KFPTPASRLALTDILEQEQCFYRVRIMACFCLAKIANFMVSTWTGPPAMKSLFTRMFCCK
SCPNIVKTNNFMNFQSYFLQKTMPVAMALLRDVHNLCPKEVLMFILDLIKYNDNRKNKFS
DNYYRAELIDALANSVTPAVSVNNEARTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTI
TVSCLNAVRILQKNGHVPSDPAVFKSYAEYGHFVDIRIAALEAVVDYTKVDRSYEELQWL
LNMVQNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTCHDWRLRCG
AVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEPGANGPEPPNNPNSLGQI
VGFQSTEDDHFLKETSILPLPHQQGLKRKADTPLGSPLEPGQILEKIEDSKVKLKIRFSN
SQEEEEIDMDTVHDSQAFIYHHLNMLERPSTPGKEQSSLEANMLPAPLPSLAGFAKESGS
SRHGEHHHHHHHEHKKKKKKHKHKHKHKHKHDNKEKEKEPFTFSNSPASGRSIHSPSLSD
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaagaaaggagacaaaggatttgagagcccaagaccttataaattaacccat
caggtgatttgcatcaacagcataaattttcaaagaaaatctgttgttggctatgtggag
ctgacaatatttccaacagttgcaaacctgaatagaattaaactgaacagtaagcaatgc
aggatatatagagttagagtcaatgatttggaagcagcttttatatataacgatccaaca
ctggaagtttgtcacagtgagtcaaaacaacgaaatctcaactacttttccaatgcctat
gctgctgcagtcagtgctgtggatccagatgctggaaatggagagttgtgtattaaagtg
ccatcagagctttggaagcatgctgatgaattaaaagtgttaaagatacacatcaacttt
tctttggatcagccaaaaggaggtctgaattttgtggtacctaatgtggaaggcagcttg
gcggaaagaggtgcccatgttttctcttgtggttatcaaaactctacaaggttctggttt
ccttgtgttgattcgtattcagaactctgcacatggaaactggaatataccgtcgatgcc
acgatggtggcagtctcaaatggcgatttagtggaaactgtgtacactcatgatatgaga
aagaagactttccattatacgctgccaatacccactgctgcctctaacatctctttggct
attggaccatttgaaattcttgttgatccatacatgcacgaggtcacccatttttgttta
ccccaacttcttcccctgctcaaacatactacgtcgtatctccatgaagtattcgaattc
tatgaagagatacttacttgtcgttacccttactcctgcttcaaaacagtttttgtagat
gaggcgtatgttgaagtagctgcgtatgcttctatgagcatttttagcacgaaccttttg
catagtgccatgataatagatgagactccgctaaccaggaggtgcttggctgaagcccta
gcccagcagttcttcggctgctttatatctagaatgtcttggtcagatgagtgggtatta
aagggaatctctggctatatttatggactttggatgaagaaaacctttggtgttaatgaa
tatcgtcactggattaaggaggaactagacaaaattgtggcgtacgaattaaagaccggt
ggcgttttactgcatccaatctttggtggagggaaagaaaaggacaaccctgcatcacat
ttacacttttctataaaacatcctcacacgttatcctgggaatattataccatgtttcaa
tgcaaggcccacctagttatgagactgatagaaaatagaataagcatggagtttatgtta
caagttttcaacaaattgttgagtctagctagcactgcttcttcccagaagttccaatct
catatgtggagtcaaatgctggtgtctacatctgggtttttgaaatccatttccaatgtg
tctggcaaagacattcaacctttaattaagcaatgggtagatcaaagcagtgtggtcaaa
ttttatggcagttttgcatttaatcgaaaacgaaatgtactcgaattagaaataaagcaa
gactatacctctcctgggacgcagaaatatgtgggtccacttaaagtgacagtgcaggag
cttgatggatctttcaaccacacacttcaaatagaagaaaacagcctcaaacatgatata
ccctgtcattcaaagagcagacgcaataagaagaaaaaaatcccattgatgaatggagag
gaagtggacatggatctttctgccatggatgccgattcccctttactatggataagaata
gatccagatatgtctgttttgaggaaggtagaatttgagcaggcggacttcatgtggcaa
taccaattgcgctatgagagagatgtggtcgcacaagaggaatccattttggctcttcaa
aagttccccaccccggcatcccggcttgcgctgactgatattctcgaacaagagcagtgc
ttctaccgagtgaggataatggcttgcttctgtcttgcaaagattgcaaatttcatggtg
agtacatggacaggaccaccagccatgaagtctctcttcactcgaatgttctgttgtaaa
agttgtccaaatattgtgaaaaccaataacttcatgaactttcagagctactttcttcaa
aagacaatgccagttgcaatggccttgctgagagatgttcacaatctgtgtcctaaagag
gttttaatgttcattttagacctgatcaagtacaatgacaacagaaaaaacaagttttca
gacaactattaccgtgcggaactgattgatgcactagcaaactctgtaactcctgcagtc
agtgtgaacaatgaagcccggactttggacaatttaaatcctgatgtgcgccttattctt
gaagaaatcacccgattcttaaacatggaaaaactgctacccagttacagacatacaatt
acagtcagctgtttaaatgcagttcggatcctgcagaagaacgggcatgttccaagcgac
cctgctgtctttaaatcttatgcagaatatggccattttgtagatattcgaatcgcagct
ttggaggcggttgttgactatacaaaagttgaccgaagttacgaggaactgcagtggctg
ctaaacatggtccagaatgatccagtgccctatgtcagacataaaatattaaacatgttg
acaaagaatccaccatttaccaagaatatggaatctcctttatgcaatgaagctttggtt
gatcaactctggaagcttatgaattcaggtacgtgccacgactggaggctgcgctgtggt
gccgtcgacctgtacttcaccctgtttggtcttagcaggccttcctgtttgcccctaccg
gagctcggcttggtccttaacctcaaagaaaagaaagctgtgctgaacccgacgataatc
cctgaacccggagcaaatggcccggaacctcctaacaatccaaactcactgggtcaaata
gttggcttccaaagcacagaagatgatcactttcttaaggaaacatccatccttcccctt
ccacatcagcaggggttgaaaaggaaagctgatacacctcttgggtctccactggaacct
ggacagatacttgagaagattgaagacagcaaagttaagctcaaaataaggttttcaaat
tcccaagaagaagaagagattgatatggacacggttcatgacagtcaagcttttatctac
catcatttaaatatgctggaaagaccatcaacaccaggtaaagaacagtcttccttggag
gcaaatatgttgccagcacctctgccttctctggctggttttgctaaagagtccggctct
tccaggcatggtgagcaccatcatcaccaccaccacgaacacaagaagaagaagaagaag
cacaagcacaagcacaaacacaaacacaagcatgacaacaaggagaaagagaaggagccg
ttcactttctccaacagcccagccagcggacggtccattcattcgccctccttatcagac
tga
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integrated database retrieval system
