Pituophis catenifer annectens (San Diego gophersnake): 139314656
Help
Entry
139314656 CDS
T11059
Symbol
UBR5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139314656 (UBR5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139314656 (UBR5)
Enzymes [BR:
pcae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139314656 (UBR5)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
HECT type E3
139314656 (UBR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
139314656
NCBI-ProteinID:
XP_070796504
LinkDB
All DBs
Position
Unknown
AA seq
2798 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNLNSHPPLNVLEQATIKQCVVGPNHAAF
LLEDGRVCRIGFLVQPDRLELGKPDNNDGSKLSSGSGAGRTSRPGRTSDSPWFLSGSETL
GRLAGNTLGSRWSSGVGGSGGGSSGRSSAGARDSRRQTRVIRTGRDRGSGLLGSQPQPVI
PASVIPEELISQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASE
SYLPGEDLMSLLDADIHSAHPSVIIDADAMFSEDISYFGYPSFRRSSLSRLSSSRVLLLP
LERDSELLRERESVLRLRERRWLDGASFDNERGSTSKEGEPNLDKKNTPVQSPVSLGEDL
QWWPDKDGMKFISIGALYSELVAVSSKGELYQWKWSESEPYRNTQNPSIHHPRAGSLGLT
NEKIILLSANSIRATVATENNKVATWVDETLSSVASKLEHTAQIYSELQGERIVSLHCCA
LYTCAQLENNLYWWGVVPFSQRKKMLEKARAKNKKPKSSAGISSMPNITVGTQVCLRNNP
LYHAGAVAFSISAGIPKVGVLMESVWNMNDSCRFQLRSPESLKNMEKANKTTETKPESKQ
EPVKTEMGPPPSPASTCSDASSIASSASMPYKRRRSTPAPKEEEKVNEEQWSLREVVFVE
DVKNVPVGKVLKVDGAYVAVKFPGTSTTANCASSTGLDPDPSSLLQDCRLLRIDELQVVK
TGGTPKVPDCFQRTPKKLCIPEKTEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQ
ENNFPTSSLAFLGQNERSVAIFTAGQESPIILRDGNGTIYPMAKDCMGGIRDPDWLDLPP
ISSLGMGVHSLTNIPANSTIKKKAAIIIMAVEKQTLMQHILRCDYESCRQYLMNLEQAVV
LDQNPQMLQTFLGHRCDGNRNILHACVSVCFPTSNKETKEEEEAERSERNTFAERLSAVE
AIANAISVVSSNGPGNRAGSSSSRSLRLREMMRRSLRAAGLGRHEAGASSSDHQDPVSPP
IAPPSWVPDPPAMDPDGDIDFILAPAVGSLTTATTGTGQGPSTSTIPGPSTEPSVVESKD
RKANAHFILKLLCDSVVLQPYLRELLSAKDARGMTPFMSAVSGRAYPAAITILETAQKVA
KAEAMSSEKEEDVFMGMVCPTGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCG
LLESLCCCTECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKSARLDLLFRLLT
TTNLVTMPNSRGEHLLLFLVQTVARQTVEHCQYRPPRIREDRNRKTANPEDSDMPDHDLE
PPRFAQLALERVLQDWNALKSMIMFGSQENKDPLSASSRIGHLLPEEQVYLNQQSGTIRL
DCFTHCLIVKCTADILLLDTLLGTLVKELQNKYTPGRREEAISVTMRFLRSVARVFVILS
VEMASSKKKNNFIPQPIGKCKRVFQALLPYAVEELCNVAESLIIPVRMGIARPTAPFTLA
STSIDAMQGSEELFSVEPLPPRPSSDQSSSSSQSQSSYIIRNPQQRRISQSQPVRGRDEE
QDDIVSADVEEVEVVEGVAGEEDHHDEQEEHGEENAEAEGQHDEHDEDGSDMELDLLAAA
ETESDSESNHSNQDNASGRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDTSDSDSSSSQ
SDDIEQETFMLDEPLERTTSSSHANGAAQAPRSMQWAVRNTQNQRTTSTAPSSTSAPAAS
SAGLIYIDPSNLRRSGTISTSAAAAAAALEASNASSYLTSASSLARAYSIVIRQISDLMG
LIPKYNHLVYSQIPAAVKLTYQDAVNLQNYVEDKLIPTWNWMVSIMDSTEAQLRYGSALA
SAGDPGHPNHPLHASQNSTRRERMTAREEASLRTLEGRRRATLLSARQGMMSARGDFLNY
ALSLMRSHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTPQLERKRTREL
LELGLDNEDSEHENDDDTNQSTTLNDKDEDSLPAETGQNHPFFRRSDSMTFLGCIPPNPF
EVPLAEAIPLADQPHLLQPNARKEDLFGRPSQGLYSSSANSGKCLLEVTMDRNCLEVLPT
KMSYAANLKNVMSMQYRQKKEEEQNVPSEESEGSKPGPSAHDLAAQLKSSLLAEIGLTES
EGPPLTSFRPQCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEVK
ESKFRREMEKLRNQQSRDLTLEVDRDRDLLIQQTMRQLNNHFGRRCATTPMAVHRVKVTF
KDEPGEGSGVARSFYTAIAQAFLSNEKLPNLDCIQNANKGTHTSLMQRLRNRGERDRERE
REREMRRNSSGLRTGSRRDRDRDFRRQLSIDTRPFRPASEGNPSDDPDPLPAHRQALGER
LYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMELIIAHGRENGADS
ILDLGLLDSSDKVQENRKRHGSSRSVVDMELDDTDDGDDNAPLFYQPGKRGFYTPRPGKN
TEARLNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQ
LILASQSTDADAVFAAMDLAFAIDLCKEEGGGQVELISNGVNIPVTPQNVYEYVRKYAEH
RMLVVAEQPLHAMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESG
ENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQH
LPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8397 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgatccacttcgtggtgcacccgctgccgggcaccgaggaccagctcaatgac
aggttaagagaagtttcagaaaagctcaacaagtacaacttaaatagccatcctcctttg
aatgtattggaacaggcaacaattaaacagtgtgtagtgggaccaaatcatgctgcattt
cttcttgaggatggtagagtctgcagaattggctttttagttcagccagacagattagaa
ttgggtaaacctgataacaatgatggttcaaagttgagcagtggctcaggggcaggaagg
acatccaggccaggcaggactagtgattccccatggtttctgtctggttctgaaactctg
ggcagactggcaggcaacacccttggaagtcgatggagctctggtgtgggaggaagtggg
ggaggttcatctggtagatcatcagctggagctagagattcaagaagacaaacacgagtt
attcgaactggacgtgacagaggatctggtctactgggtagtcaaccacaaccggtgatt
ccagcatctgttatcccagaagaactcatttcacaggcacaagttgttttacaaggaaaa
tctagaagtgtaattatcagagagcttcaacggacaaatcttgatgttaatcttgcggtg
aacaacttgttgagtcgtgatgatgaggatggtgacgatggtgatgatacagcaagtgaa
tcctaccttcctggagaggatcttatgtctcttctggatgctgacatacattctgctcac
ccaagtgtcattattgatgctgatgctatgttttcagaagatattagttactttggttat
ccatcctttcggcgctcatcactttccaggctaagctcgtcccgagttctccttcttccc
ttagagagagactctgagctgttgcgtgaacgtgagtccgttttacgtttgcgtgaacga
aggtggcttgatggagcctcatttgataatgaaagaggctctacaagcaaagaaggagag
ccaaaccttgacaagaagaatacacctgtccaaagcccagtctcattaggagaagatttg
cagtggtggccagataaggatggaatgaaatttatttctattggtgctctgtattctgaa
ttggtggcagtgagcagtaaaggggagctctatcagtggaaatggagtgaatctgaacca
tacagaaatacacagaatccatcaatacatcatccacgtgcaggatcattgggattgaca
aatgagaagatcattcttctttctgcaaatagcattagagcaactgttgctactgaaaac
aataaggtggctacttgggtagatgaaactttgagttctgtagcttctaaattagaacat
actgcacagatctactcagaacttcaaggagaaaggatagtttcactgcattgttgtgct
ctttatacctgtgctcagttggagaataatttatattggtggggtgtagttccttttagc
caaaggaagaagatgctggaaaaggctagagccaaaaataaaaagcccaagtctagtgct
ggtatatcttcaatgccaaatatcactgttggtactcaggtgtgtttgaggaataatcct
ctctatcatgctggtgcagtggccttttcaattagtgctggaattcctaaagttggtgtt
ttaatggagtctgtttggaatatgaatgatagctgtagatttcagcttcggtcaccagaa
agtttaaagaacatggagaaagctaataaaactacagagacaaagcctgaaagtaagcag
gaaccagtgaaaactgaaatgggcccaccaccttctccagcctctacctgcagtgatgcg
tcttcaatagcaagcagtgcatcaatgccatataaacggcgaagatctaccccagctcca
aaagaagaagagaaggtgaatgaggaacagtggtctcttagagaagttgtatttgtggaa
gatgttaaaaatgttcctgttgggaaggtattaaaagtggatggtgcttatgttgctgta
aaatttccagggacatctactactgcaaattgtgcaagcagcactggtttagatcctgat
ccctcttcgcttcttcaagattgccgattgctccgaatagatgaactacaagtggtaaaa
actggtgggacgccaaaagttccagattgttttcagagaactcctaaaaaactatgtatt
ccagaaaaaacagaaattctggcagttaatgtagattcgaaaggagtccatgctgtcctc
aagactggaaattgggttagatattgcatttttgatctagcaactggaaaagcagaacag
gaaaacaattttcccactagcagccttgctttccttgggcagaatgagagaagtgttgct
attttcactgctggacaggaatcaccaatcattcttagagatggaaatggcactatatat
ccaatggcaaaagattgtatgggtggaataagagatcctgattggcttgatctccctcct
attagcagtctgggaatgggagtacattccttaacaaatattcctgctaattcaaccatt
aaaaagaaagctgctatcatcataatggctgttgagaagcaaactttaatgcaacatatt
ctgcgatgtgactatgagtcctgcagacagtatcttatgaacctcgaacaagctgttgtc
ttggatcagaatccacaaatgctacagacattccttggccatcgatgtgacggaaataga
aatattctgcatgcttgtgtctctgtgtgctttccaaccagtaataaagaaactaaagag
gaagaagaagcagagcgctcagaaaggaatacgtttgctgaaagattatctgccgttgaa
gctattgcaaatgctatttcagtggtgtcaagtaacggaccaggaaatcgtgcaggttcc
tccagcagtagaagtttgcgactgagagaaatgatgagacgatctttgagagcagcgggt
ttgggcagacatgaagctggagcttcatcaagtgatcatcaggatcctgtttctcctccc
atagcccctccaagctgggttcctgatcctccagcaatggatcccgatggtgacattgat
tttatcctggctcctgctgtgggatctcttaccacagcaacaactggcactggccaagga
ccaagcacttctaccataccaggtccttctacagaaccttctgtagtggaatcaaaagac
aggaaggccaatgcacatttcatactgaaattgttgtgtgacagtgttgttctacagcca
tatcttcgggaactgctgtcagccaaggatgcaaggggcatgacaccatttatgtctgca
gtcagtggcagagcctatcctgctgcaattactattttagaaactgcacagaaagttgcc
aaagcagaggcaatgtcaagtgaaaaagaagaagatgtctttatgggaatggtttgtcca
actggcacaaatccagatgattctcctttgtatgttttgtgttgcaatgatacttgtagt
ttcacatggactggtgcagaacatataaatcaggatatatttgaatgccgaacatgtggt
ttactggaatctctgtgctgttgcacagaatgtgcacgagtgtgccataaaggccatgat
tgcaagcttaaacgcacctcacctacagcatactgtgattgttgggagaagtgcaagtgc
aaaacattaattgcaggacagaaatctgcccgtcttgatctgcttttccggctgcttact
actacaaatcttgtcaccatgccaaatagtaggggggaacatctcctactgttcttagta
cagacagttgcgcgacaaacagtagagcactgtcaataccggccgccaagaattagagaa
gatcgtaatcgtaaaactgcaaaccctgaagattcagatatgcctgatcatgatttagaa
ccgccacgatttgcacagcttgccttggaacgtgttttacaagactggaatgccttgaaa
tctatgatcatgtttggctcacaggagaacaaagaccctcttagtgcaagcagtaggatt
ggtcatcttttgcctgaagaacaagtttatcttaatcagcagagtggtactattcgtctg
gattgttttacacattgtctcattgtgaaatgtacagcagatattttgcttttagatact
ttgctggggacacttgtcaaagaattgcaaaacaagtacactccaggtcgcagagaagaa
gcaatttctgttacaatgcggtttctgcgttctgtagctagagtttttgtaattcttagt
gtggaaatggcttcctcaaaaaagaaaaacaactttattccgcagccgattggaaaatgt
aagcgtgtattccaagctttattaccttatgctgtagaggaattatgcaatgtagcagag
tccctcattatcccagttaggatgggtattgcacgtcctacagcaccttttacattggca
agcacaagcatagatgccatgcaaggcagtgaagagctgttctcagtagaacctcttcct
ccacggccatcttctgaccagtccagcagttccagtcagtcacagtcctcctatatcatt
aggaatccacagcaaagacggatcagtcagtctcagccagttcgtggcagagatgaagaa
caagatgatattgtgtcagcagatgtggaagaggttgaagtagttgaaggagttgcagga
gaagaagatcaccatgatgaacaagaagaacatggtgaggaaaatgcagaagcagaaggc
cagcatgatgaacatgatgaagatggaagcgatatggagttggatttactggcggcggca
gaaactgagagtgacagtgagagtaatcatagcaaccaggataatgctagtgggcgcaga
agtgttgtcaccgcagctacggcaggatcagaagcaggagctagtagcgtgccggctttt
ttttctgaggatgactctcaatcaaatgataccagtgattcagacagcagcagcagtcag
agcgatgacatagagcaagaaacctttatgctggatgagccactggagcgaacaaccagt
agttctcatgccaatggtgcagcccaggccccccgctccatgcagtgggccgtacgcaac
acccagaatcagaggaccactagcactgcaccatctagtacctctgctccagcagctagt
tcagcaggcttaatttatattgatccatccaacctgcgtcggagcggaaccatcagtacc
agtgcagcagccgcagccgcagctcttgaggcgagcaatgctagcagctacctaacatct
gcaagcagtttggcaagggcgtacagtattgtcattcgacaaatatcagatcttatggga
ctaattcccaaatacaatcatttggtatactcccagatcccagctgcagtgaagctgaca
taccaagatgctgtgaatttacagaattacgtcgaagacaaactgattcccacttggaat
tggatggtgagcattatggactccactgaagctcagctgcgttatggatctgcacttgcc
tctgctggagatcccggccatccaaaccatcctcttcatgcatcacagaactcaacccgg
agagagaggatgacagcgcgtgaagaagctagcctaaggactttggagggtagacggcgt
gctacattgctcagtgctcgacaggggatgatgtctgcaaggggagatttcttgaattac
gccctctccttgatgcgttcccacaatgatgagcattctgatgtccttccagtcttggat
gtctgctcactgaaacatgtagcctatgtctttcaagctctcatttattggattaaagca
atgaaccaacaaacaactttggatacgcctcagctggaacggaagaggactcgagagctt
ttggaacttggcctggacaatgaggattctgaacatgaaaatgatgatgatacgaatcaa
agtactacacttaatgacaaggatgaggactcccttccagctgaaacaggccaaaatcat
ccattcttccggcgatcagattctatgacattcttgggctgtattccacctaatcctttt
gaagttcctctagcggaggccatccctctggctgaccagcctcatctgttacagccaaat
gctagaaaagaagatttgtttggtcggccaagtcaaggtctctattcatcgtctgccaat
agtgggaagtgtttattagaagtgaccatggatagaaactgtcttgaggttcttccaacc
aagatgtcctatgcagccaatttaaaaaatgtgatgagcatgcagtatcggcagaagaaa
gaagaagaacaaaatgtgccatcagaagaatcagaaggttcaaagccggggccgtcagca
cacgatcttgcagcacaactgaaaagcagtttactggcagagattgggctaactgaaagt
gaaggacctcctctaacatccttcaggccacaatgtagcttcatgggaatggtgatttct
catgatatgctgcttggacgttggcgtctttctctagagttatttgggagagtattcatg
gaagatgtaggagcagaacctggatcgatcttgactgaattaggtggttttgaagtgaag
gaatcaaaattccgcagagaaatggaaaagctgagaaatcagcagtctagggatttaaca
ttagaggttgatcgggatagagaccttctgattcagcaaacaatgaggcagctcaacaat
cactttggtcgaagatgtgctaccactccaatggctgtccacagggtaaaggttacattt
aaggatgaaccaggagaaggcagtggtgtggcacgaagcttttatactgctattgcacaa
gcctttttgtcaaatgagaaactgccaaatctagattgtattcaaaatgccaacaagggg
acacatacaagtttaatgcagagattacggaacagaggggagagagatcgagaaagggag
cgggagagagaaatgaggagaaacagtagtgggttgcgaactggttctcgaagagacaga
gacagggattttaggaggcagctgtccattgacaccagaccttttcgacctgcatctgaa
ggaaatcctagtgatgaccctgatcctcttccagcacatagacaggccctgggtgaaaga
ctttatccccgtgtacaagcaatgcaacctgcatttgcaagcaagattacaggcatgcta
ttggaattgtcacctgcacagctgcttttgctactagcaagtgaagattcccttcgagca
agagtggatgaggctatggagctcatcattgcacatgggagggagaatggagctgacagc
attctagaccttggcttgttggattcttctgataaagtacaagaaaatagaaaacgacat
ggttctagtcgtagcgtcgtggacatggaattagatgatacagatgatggtgatgataac
gcaccattgttttatcaacctggaaaacgtggtttttatacaccgaggccaggcaaaaat
acagaagccagactgaattgctttagaaatattggcagaattctagggttgtgcttgctg
caaaatgaactatgtccgattacattaaatcgacatgtaataaaagttcttcttggcaga
aaggttaactggcatgattttgccttttttgatccggttatgtatgagagtttacggcaa
ctcatcctcgcttcccaaagcacagatgctgatgcagtttttgcagcaatggacttagct
tttgcgatagacctgtgcaaagaggaaggtggaggacaggttgaacttatttccaacggt
gtaaatataccagtcactcctcaaaatgtgtatgaatatgtccgtaaatatgcagaacat
agaatgttagtagttgcagaacaacctctacatgcaatgaggaagggtctgttggatgta
ctcccaaagaattcattagaagacttgacagcagaagatttcaggcttctagtcaatgga
tgtggtgaagttaatgtgcagatgctaatcagctttacttctttcaatgatgagtcagga
gaaaatgctgagaaacttctgcagtttaaacgatggttttggtccatagtagagaagatg
agtatgactgaaaggcaagatttagtttacttttggacatctagcccatcattacctgct
agtgaagaaggatttcagcctatgccatccatcacaataagaccaccagatgatcaacac
cttcctacagcaaacacatgtatatcgcgcctttatgttccactttattcttctaaacag
attcttaaacagaagttactactcgccattaagaccaaaaattttggttttgtgtag
DBGET
integrated database retrieval system
