Pituophis catenifer annectens (San Diego gophersnake): 139314711
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Entry
139314711 CDS
T11059
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcae01002
]
139314711 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139314711 (VCPIP1)
Enzymes [BR:
pcae01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139314711 (VCPIP1)
Peptidases and inhibitors [BR:
pcae01002
]
Cysteine peptidases
Family C64
139314711 (VCPIP1)
Ubiquitin system [BR:
pcae04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
139314711 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
139314711
NCBI-ProteinID:
XP_070796609
LinkDB
All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MSQPPQQEQQPVAALVPKKKDRRIFSGTCPDPKCQARLFFPAHGPLSSGSIECTDCGQRH
EQRQLLGVEEVTDPDLVLHNLLRNALLGVSGAGPPRKNTELVKVMGLSNYHCKLLSPILA
RYGMDKQTGKAKLLTEMNQGDVFDCALLGDRAFLIEPEHVDTVGYGKDRSGSLLYLQDTL
EDIKKANNSQECLIPVHVDGDGHCLVHAISRALVGRELFWHALRENLKKHFMENLSRYKA
LFHDFIDAAEWEDIINECDPLFIPPEGVPMGLRNIHIFGLANVLHRPIILLDSLSGMRSS
GDYSATFLPGLIPEEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIKGAALPKLPMKLLP
KAWGVPQDLIKKYIKLEDDGSCVIGGDRSLHDKYLMRLVAAMEEVFMDKHGIHPSLVADV
HQYFYRRTGVIGVQPEDVTAAAKKAVMDNRLHKCLICCALSELHVPPEWLAPGGKLYNLA
KSTHGQLRPDKNYSFPLNSLVCSYNPVKDVLVPDYSLSSLTACNWCHGTLVRRVRSDGSV
VYLDGDRTNTRSTGGKCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYESD
LSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDDYTPVNIDSAHARR
ADDMQQGQDLASQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNIAEQAPLMQKRKTEK
WKQVQKGPARTVSPGTIPDGSSSAPATPTKTPYSPISTKEKKIRITTNDGRQTMLTLKST
TTFLELQESIAREFNIPPHLQCIRFGFPPKELLPPKEGQENEPVPLLHGDRITIEILKGK
EDSNQASSVHSAHVVKHDDIAVTSKISSKELQEQIDKEMYSLCLLATFMGEDVWSYAKGL
PHLFQQGGVFYNIMKKTMGLADGEHCTFPHLPGKTFVYNATEDRLELCVDAAGHFPVGSD
VEDLVKEALNQVRAEASSRSREASPSHGLLKLGSGGVVKKKSEQLHNVTAFQGKGHSLGS
GASSQQLHPKVRETPLGRKQNTGTDFNTNSAKLDPSMYTGDSGNSELIRIAPGVGTMRDS
RQLDPNLIEAQRKKLQEMVSSIQASMDRHLRDQNTEQLATNDFSQKKLEATSSSVKTKSP
QMSLTESFTLSSGSGRLNTEITDSNMSNALAASFSTRSKAQKGNSVEDPEEMDSQDAEIT
NTTEPMDHS
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgcctcagcaggagcagcagccggtggcagcgctggtcccgaagaagaag
gaccggcgtatcttctcgggcacttgtcctgaccccaagtgtcaggcgcgcctgtttttt
ccggcgcacgggcctctaagcagcgggagcatcgagtgcacggactgtgggcagcgtcat
gaacagcggcagctgctgggagtggaggaggtgacggatcccgacttggtgctgcacaat
ttgctgcggaacgcactgctaggagtgagtggggcggggccccctagaaagaacaccgag
ctggtgaaagttatgggcctgtcaaactaccactgcaagctgctctcgcccattctggcc
cgctacggcatggataaacagacgggcaaagctaaactcctaactgagatgaaccaagga
gatgtttttgactgtgctcttcttggggaccgtgcctttcttattgagcctgagcatgtt
gacactgtaggatacggcaaagatcgctctggtagcctcctgtacttgcaggacaccttg
gaggatattaagaaggctaataatagccaggagtgcctcatcccagtccatgtggatggt
gatggccattgtttagtccatgcaatttcccgagcactggtgggtagggaactcttctgg
catgctttgcgggagaacctcaagaagcactttatggagaatctcagccgctataaagcc
ctttttcatgattttattgatgcggcagaatgggaagacataatcaatgaatgtgacccc
ttatttattcctcctgagggtgtaccgatgggtcttcgaaacatccacatttttggacta
gccaatgttttacatcggcccatcattctcttggattccttgagtggaatgcgtagctca
ggggactattctgccacatttctccctggattgataccagaagaaaaatgcatggggaaa
gatggcatgctgaacaaaccaatttgtattgcctggagtagttctgggcgtaatcattat
attcctctggttggaataaaaggtgctgctttgcctaaattgcctatgaaattacttcct
aaagcttggggagtgcctcaagaccttattaaaaagtatatcaaattggaagacgatggt
agctgtgtgataggaggagacagaagtttgcatgataaatacttgatgaggctagttgca
gccatggaggaagtttttatggataagcatggcattcatcccagtttagtagctgatgta
catcagtacttctatcggcggactggtgtgataggagttcagcctgaagatgttacagca
gctgctaaaaaggcagttatggacaaccgacttcacaagtgtctcatttgttgtgctctt
tcagaacttcatgttcctccagaatggctagctccaggagggaagctgtataatcttgca
aaaagtacccatggtcagttaagacctgataaaaattacagttttcctctgaacagtttg
gtatgttcctataatcctgtaaaggatgtattagtaccagactacagtttgagtagtctg
actgcctgtaactggtgtcatggcacattggtgcgtcgtgtgagaagtgatggctctgtt
gtatatttggatggggacagaactaatactagatcaacaggtggcaaatgtggctgtgga
ttcaaacattattgggaaggcaaagaatatgacaatctccctgaagctttcccaattact
ttagagtggggtgggagagtggtaagagagacagtgtattggttccaatatgaaagtgat
ctatctctgaacagcaatgtatatgatgttgcaatgaagcttgttactaagcactttcct
ggagagtttgggagtgagattcttgtccagaaagttgtcaatacaattctgcatcaaaca
gccaaaaagaaccctgatgattacactcctgtaaacattgatagtgctcatgcccgaaga
gctgatgatatgcaacaaggacaagatttggcatctcagcttccaaccaaaattattctt
actggacagaaaacaaaaacactgcacaaagaagaactgaatatgagtaaaactgaaaga
actattcaacaaaacattgcagaacaagcacctctaatgcaaaaacgaaaaactgaaaaa
tggaagcaagtacaaaaaggcccagctagaactgtgtctcccggtactattcctgatggg
tcatcctctgcacctgctactcccaccaagactccttattctccaatatctacgaaagaa
aagaaaattcgtataacaacaaatgatgggcgacagaccatgctcactttgaaatccact
acaacatttctagaattgcaggaaagcatagctagagaatttaatattcctccacatttg
caatgtattcgctttggctttcctcccaaggagctactgccacctaaggaagggcaagaa
aatgaacctgttcctctgctacatggagatagaataaccatagagattcttaaagggaag
gaagatagtaaccaggctagttcagtacactcagctcatgttgtgaagcatgatgatatt
gctgttactagcaaaatttcttctaaggaacttcaagagcaaatagacaaggaaatgtac
tctttgtgtcttcttgcaacatttatgggggaagatgtttggtcttatgcaaaggggctt
cctcatctgttccagcagggtggtgtattctacaatataatgaagaaaacaatgggtctg
gctgatggtgaacactgtacttttccacacttgcctggcaagacctttgtatacaatgca
acggaagatagattggaactttgtgtggatgctgctggtcatttccctgtaggttctgat
gtggaagacttggttaaagaggccctaaatcaagtacgagcagaagcttcttcaagaagc
agggaagcaagtccttcgcatggactgctaaaattaggtagcggtggagtagttaaaaag
aaatcagagcaactccacaatgtaactgcatttcaaggaaaaggccattctctaggcagt
ggagccagtagccagcagcttcatccaaaagttagggaaactccacttggaagaaagcaa
aatacaggtacagatttcaataccaattctgctaaattggacccttccatgtatacaggt
gattctggaaatagtgaacttatacggatagctcctggagtaggaacaatgagagatagt
agacaacttgatcctaatttaattgaggcacagcggaaaaaattgcaggaaatggtttct
tcaattcaggcatcaatggacagacatcttcgagatcaaaatacagagcaattggcaaca
aacgatttttctcaaaagaaattagaggcaacaagttcatcagttaaaacaaagagccct
caaatgagtttaactgaatcatttactttatcaagtggcagtggtcgtttgaatacagaa
ataactgatagtaacatgtcaaatgcattagcggcatcattctccacaagatcaaaagcc
caaaaaggaaattctgttgaagaccctgaagagatggatagccaagatgcagaaatcact
aatacaactgagccaatggatcattcatga
DBGET
integrated database retrieval system
