Pituophis catenifer annectens (San Diego gophersnake): 139314719
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Entry
139314719 CDS
T11059
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcae03036
]
139314719 (CHD7)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139314719 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
Motif
Other DBs
NCBI-GeneID:
139314719
NCBI-ProteinID:
XP_070796627
LinkDB
All DBs
Position
Unknown
AA seq
3012 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLESLGDCGYPENSVNSMGQQMPIDQGFSSLQSSLHHPTTS
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMMSSAPGNGIASPHSQYHNPPVPHGGGTGSQM
GVYSGMQNERHGQPFVDGSSMWGPRAVHVPDQIRAPYQQQQPPPAQPPSTPSGPQGQGHP
QHMQQLGNYMARGDFSIQQHGQPQQQRINQFSQSQEGLNQGNPFITTSGPGHMSHVSQQN
PSIGPSLRHSVQQFHHHPPTALHGESVAHSPRFSSNPPQQGAVRPQTLNFSSRGQTVPSP
TINSSGQYSRYPYSNINQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSNSSQGLI
HQQPLHPSGSLNQMNTQAMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGIPM
EVGSYPNIPHPQPSHQPSSAMGIGQRSMGPRNIQQNRPFMGMSSAPREMGGHMRPNGCPG
VSLADPQAIQERLISGQQHPSQSSFQQQMPTCPPMQPHTGIHHQSSPPPPHSHHQPWAQL
HQSPQNTPQKVPVLQHSPSEPFLEKPVPDMSQVSGPNAQLLKSDDYLPSIELQPQQKKKK
KKKNHIVAEGSSKGFGKEGFPSDLDNQDPSRKALEGSQEEKKKKKKPKVKKDPKDLKEPK
EKKEPKEPKTPKTPKIPKEPKEKKVKHTTPKPKTSKKASNKKAESESSAVKKKVNKGKEG
SENSDVEKTPLGSPHPEEEDDAGIQKRRSSRQVKRKRYTEDLEFKISDEEVDDADAAGRN
SPSNNSQSEQQESSDAEGPVVEKILSSRIIKKQMDNGEETQSEEFYVKYKNFSYLHCQWA
SVEVLDKDRRIQQKIKRFKAKQAQNKFLSEIDDELFNPDYVEVDRIMDISHSKDDNGEPV
IHYLVKWCSLPYEDSTWELKQDIDQTKIEEYEKLVAREPETERVERPPADDWKKSECSRE
YKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLV
IAPLSTIPNWEREFRTWTELNVVVYHGSQASRRMIQTYEMYFKDPQGRAIKGSYRFHAII
TTFEMILTDCPELRNIPWRCVIIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTV
EELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPK
EETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA
EEKILEEFKETHNPDSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDI
LEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTC
IIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS
MSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIE
SEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIEALNGRNNLVIDTPRIRKQ
TRLYSAVKEDELMEFSDLESDSEEKPSIKLRRPQDKSQGYARSECFRVEKNLLVYGWGRW
TDILLHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRALVN
HSGLSAPVPRGRKGKKVKAQSSQPVLQNADWLASCNPDALFQEDSYKKHLKHHCNKVLLR
VRMLYYLRQEVIGDQADKILEGSDSSEIDIWIPEPFHAEVPMDWWDKEADKSLLIGVFKH
GYEKYNSMRADSTLCFLERVGMPDAKAIAAEQRGTDLLTDGGDGGDFDREDEDPEYKPTR
IPFKDEIDEFANSPSDKEESLELHAGKHSENSADFGQLYWPSTSTLTTRLRRLITAYQRS
YKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVSTFGV
IFDPTKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPDEEPPDLSTVI
EPITEERASRTLYRIELLRKVREQVLHHPLLAERLKLCQPSLDLPEWWECGKHDKDLLIG
AAKHGVSRTDYHILNDPELSFLDSHKNFAQNRGGGNLTTISLLNPLGVCCGQSMSIIPTS
LVQDEKPTEQAEVKVEGAEKVPAKEKSGEEEEEEEEEEEAADVAIKSDKEEEEAEVEVAP
VKCEIKNTELSIEVDPKSISEKGSEDDEEEKLEDDDKSEESSQPEGMISRGKNFDEESNA
SLSTARDETRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDSICEAVLKGKWPV
NRRQMFDFQGLIPGYTPAAVDSPLQKRSFAELSMVGQASISGSEDVSVSPQLSKEDVLNL
SVPRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQIVSENGQEKIVDLSKASREAASS
TSTFSAVPSKFLLSTVSTPVSDAFKSQMELLQAGLSRTPTRHLLNGSLIDVEPPMKRRRG
RRKNVEGLDLLFISGKQASLTAEDAEVTKVFDEEMEPPPARNIPSPGQLDPDTHIPVINI
EDGTRLVGEDAPKNKDLIEWLKLHPMYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPN
KLDINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGF
VPESMFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLIMNSLFAGMD
LASLQNLQNLQSLQLAGLMGFPPGLATAAAAAGGDSKNPAAMLPLMLPGMAGLPNMFGLG
GLLNNPITAASGNTTMASSQGESEDGTSKVEEKKNENEEENKDSEKSTDVVSATDSANGS
VGATAAVASATTTSNTGLPANPLTFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALA
GLQNAVGSSEVKVTDKTEEAAFKDEENLEGSDAEESLDKTADSSALEDEIAQGEELDSLD
GGDEIENNENDE
NT seq
9039 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctttttggagaagatgggaatattttcagtgaagga
ctggaaagcctaggtgattgcggatatcctgaaaattcagtaaactctatggggcaacaa
atgcctattgatcaaggattttcctcactacagtcatcccttcatcatcctacaaccagt
caaaatcaagcaaagttgacccacttcgatcactataatcagtatgagcaacagaaaatg
catttaatggatcagcccaacagaatgatgagcagtgcgcctggcaatggcatagcatct
cctcattcacaatatcacaatcctccagttcctcatggtggaggtactggtagtcagatg
ggagtctattctggtatgcaaaatgaaagacacggacaaccctttgtagatggcagctct
atgtgggggccaagggcagtacatgtgccagaccagatacgggcaccataccagcagcag
caaccaccacctgcccagccgccatcaacaccatcgggaccacagggacagggacatcct
cagcatatgcagcagttgggaaattacatggctcgtggtgacttttcaatacagcagcac
ggtcaaccccagcaacagaggataaatcagttttctcaaagccaggaaggtcttaatcag
ggaaatccttttattaccacctcaggacctggccacatgtctcatgtgtcccaacagaat
ccaagcattgggccttctttacgacactcagtgcaacagtttcatcatcatccccccaca
gctctccatggagaatcagtagcccacagtcccagattctcttccaaccctcctcaacag
ggtgccgttaggccacaaacacttaattttagttctcggggccagacagtaccttcacct
actataaacagctcagggcagtattctcgttatccttacagcaacataaatcagggatta
gtaaacaatacagggatgaatcaaaatttaggccttacaaataacactccaatgaatcag
tctgtaccaaggtacccaaatgctgtagggtttccatctaacagtagtcaaggactaata
caccagcagccccttcaccctagtggctcacttaaccaaatgaacactcaagctatgcac
ccatcacagcctcagggaacttatgcttctccacctcccatgtcacctatgaaagcaatg
agtaacccagcaggtactcctccaccacaggtcagacctggtagtgctggaataccaatg
gaagttggcagttatccaaatataccacatcctcagccatctcaccagccatctagtgcc
atgggaattggacagaggagtatgggccctcggaatatacaacagaatcgtccattcatg
ggtatgtcttcagcaccacgggaaatgggtggtcacatgagaccaaatggttgtccaggt
gttagccttgctgatccacaagcaatacaagaacgattaatatctggtcagcagcatccc
agtcagtcatcttttcaacagcaaatgccaacatgtcctcccatgcagcctcatacagga
attcatcatcagtcttcaccaccaccaccacattctcaccatcagccttgggcacagctt
caccaatcaccacagaacacaccgcaaaaagtgcctgtccttcagcattctccatcagaa
cccttcctagaaaaaccagtgccagacatgtctcaggttagtggaccgaatgctcagctc
ttgaaaagtgatgattaccttccctcaattgaactacaaccacagcagaagaaaaagaaa
aagaaaaagaatcatattgttgcggaaggttccagcaaaggatttggtaaggaaggcttt
cctagtgatcttgataaccaggatcctagcagaaaagccctagaaggctcccaggaagaa
aaaaagaaaaaaaagaaacccaaggtgaaaaaggatccgaaggatttgaaggaacccaag
gagaagaaggagcctaaggaacccaagacacccaaaacccctaagatccccaaagagcca
aaggagaagaaagtaaaacacactacaccaaaacccaagaccagcaaaaaagcaagtaat
aagaaagcagaatcagaatctagtgcagtgaagaaaaaggtcaacaagggaaaggaaggt
tctgaaaactcagatgtggaaaaaacaccactaggatcaccacatcctgaagaggaagat
gatgcaggaattcagaagaggcgttctagcaggcaagttaaaagaaagcgttatacagaa
gacttggaattcaagatttctgatgaagaagttgatgatgcagatgctgctggaagaaac
tccccttcaaataactctcaatctgaacaacaggaatcttctgatgctgaaggtcctgtg
gtagaaaaaattttgagtagccgcataatcaagaaacagatggataatggagaagaaaca
caatcagaagaattctatgtaaaatacaaaaacttctcttacctccactgccaatgggca
tctgtggaagtactggacaaagacaggagaattcaacagaagattaaaagatttaaagca
aagcaggctcaaaataagttcctttcagagatagatgatgaactttttaatccagattat
gttgaagttgaccgaataatggatatttcacatagcaaagatgataatggagagcctgtg
attcattatttggtgaaatggtgttcacttccatatgaagacagcacatgggaattaaag
caagacatagatcaaactaagattgaagaatatgagaaactagtggctagggagccagaa
acagaacgtgtggaacgacctcctgctgatgactggaagaaatcagaatgttccagagaa
tataaaaacaacaacaaactcagggaataccagttggaaggagtaaactggcttcttttc
aactggtacaacacacgcaactgcattttagcagatgaaatgggattggggaaaactatc
cagtccattacatttctctatgagatatatttaaaaggaatccatggtccatttttggtt
attgccccattgtctacaatccccaactgggaaagagaattccgtacttggacagagttg
aatgttgttgtgtatcatgggagccaagccagtcgaaggatgattcagacatatgaaatg
tacttcaaagacccacagggtcgggcaattaaaggatcatacagatttcatgccatcatt
acaacatttgaaatgattttgactgattgtcctgagctccgtaacattccgtggcgatgt
gtgataattgatgaagctcacaggctgaagaacagaaattgtaagctgctagaagggctc
aaaatgatggacctggaacacaaggtgcttctaacagggactcctttgcaaaatactgta
gaagagcttttcagcttgctccatttcttggaaccaagtcgttttccttcagaaacgact
ttcatgcaagaatttggtgatctaaaaactgaggaacaggttcagaaacttcaagcaatt
ttaaaaccaatgatgttaagacgactgaaagaagatgtggagaaaaacctggcacccaag
gaagaaactattattgaagttgaattgacaaacattcagaaaaaatactacagagctatt
cttgaaaagaatttcgcatttttgtcaaaaggaggtggtcaagcaaatgttcctaatctg
ttaaacactatgatggaactgagaaaatgttgcaaccatccataccttataaatggtgct
gaagagaaaattttggaagagtttaaagaaacacacaatcctgactctccagattttcag
ctccaggcaatgatccaggctgctggcaagctagtactgattgacaagttgctgccaaaa
ttgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttggacata
ctggaagactacctcattcaaagacgatatccttatgaacgaattgatggcagagtaaga
ggcaaccttcgtcaagcagctattgataggttttccagacctgattctgacagatttgtt
tttctattgtgcacaagagcaggtggcttggggattaatcttacagctgctgatacctgc
attatttttgattcagattggaatcctcaaaatgatcttcaggctcaggctcgatgtcac
aggataggacagagcaaatcagtgaagatctacagattaataacaaggaattcttatgaa
agggaaatgtttgacaaagcaagcttaaaacttggtcttgataaagctgtgcttcaatcc
atgagcggaagagagaatgctacaaatggggttcagcagctctccaaaaaggaaatagag
gatcttttgaggaaaggggcttatggtgctttaatggatgaagaagatgaaggatccaaa
ttttgtgaagaggatatagatcaaattcttctgagacgaacacacacaatcacaattgag
tctgagggaaaaggctccacatttgcaaaggctagttttgttgcatctggtaacagaaca
gatatttctttagatgatcctaatttctggcagaaatgggcaaaaaaagctgaacttgat
attgaagccttaaatggaaggaacaatctagttattgatactccaagaataagaaagcaa
actagattatacagtgcagtcaaagaagatgaactgatggaattttcagacctcgaaagt
gattctgaagaaaaacctagcataaaacttcgtaggccacaggacaaatcccagggatat
gcaaggagtgaatgctttagagtagaaaaaaatctgttggtctatggttggggacgatgg
actgatatccttttacatggacgttataagcgtcagctaactgagcaagatgtggaaact
atttgccgaactatccttgtatattgtctcaatcattataaaggggatgagaatatcaaa
agttttatctgggatttgattactccaactgcagatggacaaactcgggccctagttaat
cattctggcttgtctgctccagtgccccgggggagaaaaggcaaaaaagtaaaagctcag
agttcacaaccagtgcttcagaatgctgactggctagccagctgtaatccagatgccttg
tttcaggaggacagctataagaaacatctcaaacatcactgtaataaggtcctgctgcgt
gtccgcatgctgtactatctgaggcaagaagttataggggaccaagctgacaagatctta
gagggttctgattcaagtgagattgatatttggattcctgaaccatttcatgcagaagtt
cctatggattggtgggataaagaggcagataaatcacttttaattggagtgttcaaacat
ggctatgagaagtacaattctatgagagcagactctactctatgttttttggaacgagtt
ggcatgcctgatgccaaggccattgctgctgagcagagagggacagatctattaacagat
ggtggcgatggaggtgattttgatagagaagatgaagacccggaatataaaccaaccaga
attccattcaaagatgaaattgatgaatttgcaaactcaccttctgacaaggaagaatct
ctagaactccatgcaggcaagcacagtgaaaatagtgctgattttggtcaactctactgg
ccaagcacttcaaccctgactactcgcttgcgccgtctcattactgcctatcaacgtagt
tataaaaggcaacaaatgaggcaagaagcattaatgaagactgaccggcgtcgacggcga
cctcgtgaagaagtgagagcactggaagcagaaagagaagctataataacagaaaaacgt
caaaagtggacaaggagagaggaagcagatttttatcgtgttgtatctactttcggagtt
atttttgaccctacaaagcaacagtttgattggaaccagttcagagcttttgccagactt
gataagaaatctgatgaaagtttggagaagtacttcagttgttttgtagctatgtgcagg
cgagtgtgtcgaatgccagccaaaccagatgaagaacctcctgatctttctactgtgatt
gagcctatcactgaagaacgtgcttccagaactttgtatcgtatagaactcttgaggaaa
gtccgagagcaggttctccatcacccactattggcagagaggctaaaattgtgtcagcca
agtttggatttaccagaatggtgggagtgtggcaaacacgataaagatttattgattgga
gctgctaaacatggagtcagcaggacagattatcacattctcaatgatcctgaactttct
tttcttgattctcataaaaattttgctcaaaatagaggtggtggtaatctaactaccata
tctctattaaatccactgggtgtttgctgtggtcagtcaatgtctattatcccaacctca
ctagtacaagatgaaaaacctacagaacaagctgaggttaaagtggaaggagctgaaaaa
gtaccagccaaagaaaagtctggcgaggaggaggaggaggaggaggaggaggaagaggca
gcagatgttgcaataaaaagtgataaggaggaggaggaagctgaggttgaggttgctcct
gtaaaatgtgaaataaaaaatacagaactgagtatagaagttgatcctaaatcaatttct
gaaaaaggttcggaagatgatgaagaagaaaaacttgaggatgatgacaagtcagaagaa
tcttcacaacctgaaggaatgatttctcggggtaagaattttgatgaagaaagcaatgca
tccctgagcactgcaagggatgaaacgcgtgatggattttatatggaagatggagaccca
tcagtagcccagttgcttcatgaaagaacatttgccttttctttttggcctaaggatcga
gtaatgatcaaccgattagacagcatctgtgaagcagtgctgaagggaaagtggccagta
aatagacgccagatgtttgatttccaggggcttataccaggatatacgccagcagctgtg
gacagtcctctacagaaaagaagctttgctgaactctccatggttggtcaggccagcatc
agtggcagtgaagatgtctctgtatcgcctcagttatctaaggaagatgtactcaattta
tcagttccacgtcagcggaggaggcggaggaggaagattgaaattgaggctgaaagggca
gccaagaggagaaatttaatggaaatggttgcccaattgcgggaatcacagattgtctct
gaaaatgggcaagaaaaaattgtagacttatcaaaagcctcacgggaggcagcaagttct
acctcaaccttttcagctgttccttcaaagtttctgttatctactgtttcgacaccagta
tctgatgcctttaaaagtcaaatggagctgctacaagcaggcctttctcgcacacccaca
agacatctgctaaatggttccttaattgatgtcgagccacccatgaaaaggagaagagga
agaaggaaaaacgtagaaggtcttgatcttttatttataagcggcaagcaagcatctctg
acagcagaagatgcagaagtgaccaaagtgtttgatgaagaaatggaacctcctccagca
agaaacattccatctcctgggcaactggatcctgatactcatattcctgtcattaatata
gaagatgggaccagactagtgggagaagatgcacctaaaaacaaggatttaattgaatgg
cttaaattgcatcccatgtatactgttgatatgccaagttatgtaccaaagagtgcagat
gtgctgttttccccatttcagaaaccgaagcaaaaacggcacagatgtcgaaatcctaat
aaattggatattaataccttaactggagaagagagggttcctgttgtaaataaacggaat
gggaagaagatgggtggtgctatggccccaccaatgaaagacttgccaagatggctggaa
gaaaatccagaatttgctgttgctccagattggactgacattgttaagcagtctggtttt
gttccagaatccatgtttgaccgtcttctcacaggtcccgtggtgcgagaagagggtgca
agcagaagagggagaaggccaaaaagtgaaattgccaaagcagctgcagcagctgctgct
gtagcttcaacatcgggaattaacccactgataatgaacagtctgttcgctggaatggat
ctcgcaagccttcagaatttacaaaatctacaatctctccaacttgcaggtctcatgggc
ttccctccaggactggcgacagctgctgctgctgctggaggtgattctaaaaatccagct
gctatgctgcctctgatgttgccaggtatggcagggttgcccaatatgtttggactaggt
ggattgttgaataacccaataacagctgcttctggaaacaccactatggcttccagtcaa
ggagaaagtgaagatggcacttcaaaagtagaagaaaagaagaacgagaatgaagaggag
aacaaagactctgagaaaagcacagacgttgtttcagctactgactctgcaaatggatct
gttggtgcaactgctgctgtggcctctgctaccaccacaagcaacactggattgcctgcc
aaccctctaaccttcaatcctttccttctgtcaacgatggcccctggtctgttttaccct
tctatgtttctacctccgggattgggaggattgacactacctggtttcccagcattagcg
ggacttcagaatgcagtgggctccagtgaagtgaaggttacggataaaactgaagaagct
gcctttaaagatgaagaaaatctagagggcagtgatgcagaggagagccttgataaaact
gcagattcctctgctttagaagatgaaatagcacagggtgaagaattagactcacttgat
gggggggatgaaatagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
