Pituophis catenifer annectens (San Diego gophersnake): 139314728
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Entry
139314728 CDS
T11059
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139314728 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcae01009
]
139314728 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139314728 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
pcae03029
]
139314728 (RB1CC1)
Protein phosphatases and associated proteins [BR:
pcae01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139314728 (RB1CC1)
Membrane trafficking [BR:
pcae04131
]
Autophagy
Autophagosome formation proteins
ULK complex
139314728 (RB1CC1)
Mitochondrial biogenesis [BR:
pcae03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
139314728 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
139314728
NCBI-ProteinID:
XP_070796644
LinkDB
All DBs
Position
Unknown
AA seq
1595 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKQAIQNKYRIAIQYQVLVVNGGECMAADRKVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFLAENEMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEIAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENAYSSYLQ
SIDDIKLKLTHLGAAVSIMAKIPLLECLTRHSYRECLERMDSSTDHGGTESEDTENEKSA
EVMLSPDTLKMNKQLLIASFCKSVEHPTSDDPDFEKVNENREASQYAVQDRDVSMELNEN
DLPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLADCRQTIAKLDNQNM
KAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHANQ
LMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTEL
LERVKIVEKLSNVPQMYCLAVVEVVRRKMFVKHYREWAGALVKDGKHLYDAEKAKRESFG
KLFRKSFLRNRLFRGLDAWPPSFCTRKPRRFDGELPDISLSDLQFLQSFCPSEVQPLLRV
PILCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSITTPRMENT
TGITIATSPKTPSPLNLQGPLCPSVCPPAPLEELSPDSIDAHTFDFETIAHPNIEQAFKQ
ESLDLDSLAESPESDFMSAVNEFIIEENPSSPNVISDPQSPEMMVESLYSSVINAIDSRR
MQDTNICVKDAVLENPALNVYMDKCRDVAQESQLNLMNIKEDLYHFRTFVKKEQCNFSSS
LKCTSVEIRNIIEKVKFSLEKSLKDKHQKELQSVKTEYESKINILVEDSEENKKKIAKLH
CDLKELEEVLHDKDNEFEIVKNEKEAVVFLQNEKDQKLIEVECQMKKLYHEIKELTESRE
RVLDNLKKLNVENEEKLQLLKAECQTMEQDHLKELESNLHVRHMQEFEELIGKHNECLEK
LKKEHQHQLEKLQESHAANVFEKEQQIEELKIKVSELSDWRCKLEVELALKEAEADEMKV
LIEANKAQQQNNLRTLVDKETEMLRKETDKLRHIIQVNNDEYQVGLADLRTIITVEKDHC
ISELIDRHEGEANLLRIELDKTTSLHQKALETEKNLEEQIKELQGKLELELNAVQKQKEE
LLALREQQKKYEDTIEKLIEEKELLIAAHEQDRKEMVQKLSCEKEDAVQNALKDFELQRD
AVEKELLEKIQQLEMQVNQSSFESSASSLVAELQEKLQEEKVKFLEQLEEYEKRKNEEMQ
NIRTSLTAEQQTTFNTVLIREKLKKENIINELSDKLKLIKQQQERDKDLIESLSEDRARL
LEEKKKLEEEVNKLKNSNLVSSTCLPPILEPSGACAADFTSETERLSSDTAEEGKIDSTL
ETSMMTVNENVQMSEEKQRIMMLEKTLQLKEEENKRLNQRLMSQSMSSVSLRHSEKIAIR
DFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLTALDLKPGECASGTSRRPWVLGKV
MEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggtcaacacaggaactacccttacctttgatacagaactt
gcagtacagaatgtggctgatcttaaacaagcaatccaaaacaaatacagaatagccatt
caatatcaggtactggttgtcaatggaggtgaatgtatggcagctgacagaaaagtctgt
agttacagtgctggaacggatacaaacccaattttcctcttcaataaagaaatgatcttg
tgtgaacgtcctccagctatacctaaaacaacatttttagcagaaaatgagatggaaata
aaagttgaagaatcccttatgatgcctgcagtttttcacacagtagcttcacgaacacag
cttgctgtggaaatgtatgaaatagccaaaaagctttgctccttctgtgaaggcctcgtt
catgatgaacatcttcagcaccaaggctgggctgctataatggcaaatttggaagattgc
acatattcttatcaaaaattgcttttcaaatttgaaaatgcatattcaagttacctgcaa
tccatagatgatattaaactgaaacttacacacttaggggctgctgtttcgattatggcc
aagatcccattgctggagtgcctaactagacatagttacagggagtgtttggaacgaatg
gattcttccactgatcatggaggaacagaaagcgaagacactgaaaatgagaagtcggct
gaagttatgctttctcctgatacacttaaaatgaacaaacaattattgatagcatcattt
tgcaagtcggtggaacatccaacctcagatgatccagattttgaaaaagtgaatgaaaat
agggaagctagtcaatatgcagttcaagacagagatgtttcaatggagcttaacgagaat
gatctgccttcttttaatgtttcacttttagactggataaatgttcaagatagacctaat
gatgttgagtccttggtcaggaaatgttttgattccatgagcagacttgatccaagaatt
attcaaccttttttggccgactgtagacagacgattgccaaattagataatcagaacatg
aaggctattaagggactggaggataggctttatgcgctggaccagatgatagctagctgc
agcaggctcgttaatgaacaaaaagaacttgctcagggatttttggctaatcagaagaga
gcagagaacttgaaagatccttctgtactacctgacttgtgcttgagccatgcaaatcaa
ctgatgatcatgttaactaaccacaggaaacttttagatattaaacaaaaatgtactact
gccaaacaagaacttgcaaataatttacaagtccgactgaagtggtgctgcttcgtcatg
cttcatgctgaccaagatggagagaaactacaagcattgcttcgccttgtaacagagctg
ctagaaagagtgaaaattgtagaaaagctcagtaatgtcccacagatgtactgtttggca
gttgttgaagttgtaagaagaaaaatgtttgtgaaacactacagagagtgggctggtgca
ttagtaaaagatggtaaacatctttatgatgcagaaaaagccaaaagggaatcttttgga
aaattatttaggaaatctttcttaagaaatcgtttgttcaggggccttgatgcctggcca
ccatccttttgtactcgaaaacctcgcagatttgatggtgaacttcctgatatttcatta
tctgatttgcagtttcttcaatccttttgtccttcagaagtacaaccattactcagggtt
cccatactttgtgattttgaacctctccaccagcatgtacttgctttacataaccttgtc
aaagcagcacagagtttggatgaaatgtcccagaccattacggatttgctgaatgaacaa
aaggcttccaacagtcaagcctcgccacaatctatcactacaccaagaatggaaaataca
acaggaataacaattgctacctctcctaaaactccatcacctctcaatcttcagggtcct
ctttgcccttctgtgtgtcctccagctcctttagaagaattgtctccagacagtattgat
gctcacacatttgattttgaaacaattgcccacccaaacatagagcaagcttttaaacaa
gaatctttagatttggactcattggccgaaagtccagaatctgattttatgtctgcagtg
aatgagtttataatagaagaaaatccatcatctccaaatgtgataagtgaccctcaaagt
ccagaaatgatggtagaatccctctattcctcagttatcaatgcaatagatagtaggagg
atgcaagacacaaatatatgtgtaaaggatgcagttttagaaaatcctgctctaaatgtt
tacatggacaaatgcagagatgttgcccaagagtctcagttaaatttaatgaatatcaaa
gaagacctttaccactttagaacatttgtaaaaaaagaacagtgtaacttttcctcttct
ttaaaatgtacttcggtagaaataaggaatattatagagaaagtcaaattttctcttgaa
aaatctttaaaggataagcatcaaaaagaactacagtctgtaaaaactgaatatgaaagt
aaaataaatattttagttgaagatagtgaagaaaacaaaaaaaagattgctaaattacat
tgtgacttaaaagaacttgaagaagttttacatgacaaagataatgaatttgaaatagta
aagaatgaaaaggaagcagttgtgttcttacaaaatgaaaaagatcagaaattgattgaa
gtggaatgccaaatgaagaagctgtatcatgaaattaaagaactgacagagtcacgtgaa
agagtattagacaatttgaaaaaacttaatgttgaaaatgaggaaaaattgcaacttctg
aaagcagaatgtcaaactatggagcaagatcacctaaaggaattggaatctaatctacat
gtcagacatatgcaagaatttgaagaattaataggcaaacacaatgaatgtttagagaag
ttaaaaaaagaacatcaacaccaacttgaaaaactgcaggaatctcatgctgctaatgtc
tttgaaaaagaacaacagattgaggaattaaagattaaggtttctgaattatctgactgg
agatgtaagctcgaagttgaacttgccttgaaagaagcagaagcagatgaaatgaaagta
cttatcgaagcaaacaaagctcagcagcaaaataatcttagaacccttgttgacaaagaa
actgaaatgctaagaaaagagactgataaattaaggcatataattcaagttaataacgat
gaatatcaggtaggtctagcagatctgaggactataataacagttgagaaagatcactgc
atttcagaattaattgacaggcatgaaggagaagcaaatttgcttagaatagaattggat
aaaacaacctccttgcatcagaaagcactggaaacagaaaaaaacctggaagaacaaatt
aaagaattgcaaggtaagctggaattagaattgaatgctgtacagaaacaaaaagaagag
cttttagctttgcgtgaacagcagaagaaatatgaagacactattgagaaactcatagaa
gaaaaagaactattaatagctgcccatgaacaagacaggaaagagatggtacagaaactc
agttgtgaaaaagaagatgcagtacaaaatgctcttaaagactttgaattacagagggat
gctgttgaaaaagaacttttggaaaaaatccagcaacttgagatgcaagttaatcagagt
tcatttgaatcatctgcttcaagcttggttgcagaacttcaagaaaaactccaggaagag
aaagtgaagtttttggaacagcttgaagaatatgagaaaagaaaaaatgaagaaatgcaa
aacattcgaacatcactcactgcagagcagcagactacatttaacactgttctaataaga
gaaaagctgaaaaaagaaaatataatcaatgaacttagtgacaaattgaaattgataaaa
cagcagcaagaaagagacaaggatctgattgaaagtctttctgaagatcgtgctcgttta
cttgaagagaagaagaaacttgaagaagaagttaataagctgaaaaatagcaatcttgtt
tcatcaacatgcttgcctcctattctggaaccttctggagcttgtgcagctgatttcaca
tcagaaactgaacgtttgagttctgatacagcagaagaaggaaaaattgattccacacta
gaaactagcatgatgactgtaaatgaaaatgtccagatgtctgaagaaaaacagaggata
atgatgttagaaaaaactctgcaattgaaagaggaggaaaataaaaggctcaatcaaaga
ctgatgtctcaaagcatgtcttcagtttctctaagacattctgaaaaaattgctatcaga
gattttcaagttggcgatttggttctcataatcttggatgaacgtcatgacaactatgta
ttatttactgttagcccaactttgtattttttacactcagaatctcttactgcactagat
ctcaaaccaggtgagtgtgcttctggaacatctcgaagaccttgggtgttagggaaagta
atggaaaaagaatattgtcaggcaaaaaaggcacaaaaccgattcaaagttcctctgggt
acaaaattctacagagtaaaagcagtaccatggaataagaaagtataa
DBGET
integrated database retrieval system
