Pituophis catenifer annectens (San Diego gophersnake): 139314741
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Entry
139314741 CDS
T11059
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139314741 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcae03036
]
139314741 (SS18)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
139314741 (SS18)
GBAF(ncBAF) complex
139314741 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
139314741
NCBI-ProteinID:
XP_070796671
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTLECSQYQQLLHTNLVY
LATIADSNQNMQSILPPPPTQNMPMGPGGMNQSGPPPPPRTHSMSSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPIQGPGPSQLSMTNNSMSIPSNNHGSMGAYNHSVPSSQSIPGQSQMT
ISQGQPMASYGPRPNINMPPNQGPMMHQQPPSQQYNIPQGGAQHYQGQQPPMGMISQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHSDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNAQYGQQQDAYQAPPQQPGYQQQQYPGQQGYPGQQ
QGYGPSQSAPGPQYSNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcggccccccggcagcggggcaaaggcgagataacgccggctgcc
atccagaagatgttggatgaaaataatcacctgattcagtgtataatggactaccagaat
aaaggcaaaactttggaatgctctcagtatcagcagctgttgcatacaaatctggtctac
ttagccacaatagcagactccaatcaaaacatgcaatctatattgccaccaccgcccaca
cagaatatgccaatgggtcctggaggaatgaatcagagtggccctcccccacctccacgt
actcacagtatgagttcagatggtatggtaggtgggggccctcctgctccacatatgcag
aaccagatgaacggccagatgcctggacctaatcatatgcccatacagggacctggacca
agccaacttagcatgacaaacaactccatgagtataccttcaaataatcatgggtcaatg
ggagcctataatcattcagtgccatcttcacaaagtatacctggacagagtcagatgaca
ataagccaaggacaacctatggccagctatggtcccagaccaaatataaatatgccgcca
aatcaaggtccaatgatgcaccagcaaccaccatctcaacagtataatataccccaggga
ggggcacaacattatcagggacaacagccaccaatgggaatgataagccaagttaatcaa
ggaaaccatatgatgggacagaggcagattcctccatatagacctccacagcaaggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacag
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcatagtgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggtaacgctcagtatggccaacagcaagatgcataccaagccccacct
caacaaccaggctatcaacagcaacaatatccaggtcagcagggttatcctggacaacag
caaggttatggtccttcccaaagtgctccaggacctcagtattccaattatcctcaagga
caaggtcaacaatatggaggatatagacctacgcagcctggccctccccagcctccacaa
caaaggccttatggatatgaccaggggcagtatggaaattaccagcagtga
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