Pituophis catenifer annectens (San Diego gophersnake): 139314758
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Entry
139314758 CDS
T11059
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03013
Nucleocytoplasmic transport
pcae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139314758 (PNN)
03015 mRNA surveillance pathway
139314758 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139314758 (PNN)
03041 Spliceosome [BR:
pcae03041
]
139314758 (PNN)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139314758 (PNN)
Spliceosome [BR:
pcae03041
]
Complex C
Other components
EJC/TREX
139314758 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
139314758
NCBI-ProteinID:
XP_070796718
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPAQGRLLAITGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGSTNRLAGERRTRRESRHESDAEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKMFDDSQKKLNALFENRRTEFAEQINKMEARPRRQSVKEKEHQEVQK
EEKKEDQNKDQEEGKVVQQVEEMETGNKSNDIEMEEVREEKEIGASHSDGEIEQEEEEQK
EEMEVKVEEEAEVKENDRQTDNQTEEVELVKVESEGIQQIDGEQDVMEINEVDCTEPLEN
EISTEVEPEMECNAEPEQEGPTVALEKEEPSKPEVDAEPEESEEKEPESIPVSEAEVQPQ
SESLIWPQPLPLLESAQDQAPQLDKESVVSEKLPEMQADQVQAVSVEIKNKIRSRSRGRA
RNKTSKSRSRSTSSSTSSTSSTSSSSGSSSSSGTSSSRSSSSSSSSSGTSSRESTSSSSS
SESRSRSRGRGHNRDRKHRRSLERKRRDNSGVDRSHKSSKGSRRDAKGSKDKSSRSDRKR
SISESSWSGKRTSRNERDRKSDRKDKRR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagccgtgcgggctctacaggagcagctggaaaaggccaaggaaagcctcaag
cacgtcgatgagaatatccgcaaactcacggggcgggaccccaacgatgtgcggcccgct
caaggtagactgttggccatcacaggccctggtggaggtagggggcgcggaagcctatta
ctgaggcgtggattctcggatagcggaggaggacccccagccaaacagagggatctagaa
gggtcgacgaatagattggctggtgaacgtcggaccaggagagaatcacgccatgaaagc
gacgcagaggatgatgatgttaaaaaaccagcgttgcagtcctctgttgttgctacctcc
aaagagcgaacacgccgagaccttattcaagatcaaaatatggatgaaaaagggaaacaa
aggaatcggcgtatatttggcctgttgatgggtactcttcagaagtttaaacaagaatca
acagttgctactgagaggcaaaaaagaagacaagaaattgagcagaaacttgaagtgcag
gcagaagaagaaagaaagcaggttgaaaacgaaagacgagaactctttgaggaaagacgt
gctaaacaaacagaactacgactattggaacaaaaagttgaacttgctcagttgcaagaa
gaatggaatgaacataatgccaaaataattaaatatataagaacgaagacaaaacctcat
ctattctatatacctggcagaatgtgccctgctacccagaagatgtttgatgattcccaa
aaaaagctaaatgcactgtttgaaaatagacgcactgaatttgctgagcaaattaataaa
atggaagccaggcccagacgacagtctgtgaaggaaaaagaacaccaggaggtacagaaa
gaagaaaagaaggaagaccagaacaaggatcaggaagagggtaaggtggtacagcaggtg
gaggagatggagacaggtaataagagcaatgatatagaaatggaagaggtaagggaagaa
aaggagataggtgctagtcatagtgatggggagatagaacaggaagaggaagagcaaaaa
gaggaaatggaagttaaagtagaagaggaagctgaagttaaagagaatgacaggcagaca
gataaccaaactgaggaagttgagctagtgaaagtagaaagtgaaggtattcagcaaata
gatggtgagcaggatgtaatggaaattaatgaggtagattgtacagagccattagaaaat
gaaattagcacagaggttgaaccagaaatggaatgtaatgcagagccagaacaggaaggg
cctacggttgccctggaaaaagaggaacccagcaagccagaagttgatgctgaaccagag
gagtcagaagagaaggagcctgaatccattccagtatcagaggctgaggtccagcctcag
tcagagtctctgatttggccacagcctttgccacttttggaatctgctcaagaccaagcg
ccacaattagacaaagaatctgtagtgtctgaaaagctgcctgaaatgcaggcagatcaa
gtccaggcagtaagtgtagaaattaaaaacaaaattaggagcagaagcagaggtagggca
agaaacaaaactagtaagagtcgaagtcggagtactagtagtagcactagtagtactagt
tctacaagtagtagcagtgggagcagttctagcagtggtacaagcagtagtcggagcagt
tccagcagcagtagtagcagtggtactagtagtcgagaaagtactagtagttctagtagc
agtgagagtagaagtcgaagcagggggcgaggacataatagagatagaaagcatagaagg
agtttggaacgtaagcgaagggacaattcaggagtagatagaagtcacaagtcatcaaaa
ggtagcagaagagatgcaaaaggatcaaaggataaaagttcaaggtcggacagaaaaagg
tctatatcagaaagtagttggtcaggcaaaaggacttcacggaatgaaagagaccgtaaa
tcagacaggaaagacaaaaggcgttaa
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