KEGG   Pituophis catenifer annectens (San Diego gophersnake): 139314935
Entry
139314935         CDS       T11059                                 
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
pcae  Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04510  Focal adhesion
pcae04512  ECM-receptor interaction
pcae04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:pcae00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    139314935 (LAMC1)
   04518 Integrin signaling
    139314935 (LAMC1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    139314935 (LAMC1)
SSDB
Motif
Pfam: Laminin_N EGF_laminin Laminin_B EGF_LMN_ATRN Death Laminin_II
Other DBs
NCBI-GeneID: 139314935
NCBI-ProteinID: XP_070797051
LinkDB
Position
Unknown
AA seq 1595 aa
MDVRLNLGLLLLLLIGPCGGAMDECADEQSGRPQRCMPEFVNAAFNATVVATNTCGSPAE
EYCVQTGVTGVTKSCHLCDASQPHLQHGAAFLTDYNNQADTTWWQSQTMLAGVQYPSTIN
LTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCEKTYHKPNRGFV
KSWEDEQQAVCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVSLN
RLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNEYGKLACSCKHNTFGV
DCEKCLPFYNDRPWRRATAESANECLRCNCNGRSQECYFDPELYRSTGHGGHCTGCFGNT
DGPNCERCRENFYRLGSEESCLPCSCSPVGSLSTQCDNYGRCSCKLGVMGDKCDRCQPGF
HSLTEAGCRRCSCNPAGSTDECNVETGRCTCKDNVEGFNCERCKPGFFNLDSDNPRGCIP
CFCFGHSSVCTNAVGYSTSKITSTFQTGKENWHAEQRDGSEISIRWIPETQEISVISDTP
FPIYFSTPGKFLGNQLLSYGQNLSFSFRVNKRDTRLSAEDIVLEGAGLRVSVPLIAQGNS
YPSENTLKYSFRLHEATDYPWRPSLTPFEFQKLLHNLTAIKIRGTYSERSAGYLDDVTLV
SAHPGHGIPATWVENCMCPAGYLGQFCETCAQGYRRETPNLGPYSPCVPCFCNEHSETCN
PESGACDCRDNTAGPHCEKCSDGYYGDATTGTSSDCQPCPCPGGSSCAVVPKTKEVVCTS
CPAGTTGKRCELCDDGYFGDPLGQNGPARPCRLCHCSDNIDPNAVGNCNRLTGECLKCIY
NTAGFYCDRCKDGFFGNPLAQNPEDKCKACNCNPYGTANLQRSCNQVTGQCECLSHVTER
DCSSCEPGFYNLQSGRGCERCNCHPLGSTNGHCDIQTGQCECQPGVTGQRCERCEGNHFG
FGPEGCKPCDCNPEGSRSLQCKEDGHCECKEGFVGIRCDQCEENYFYNRSWPGCQECPAC
YRLVKDKVEEQRGRLRNLENLIANIGTGDDIITDQAFEDRLKEAEREVMDLLRDAQSIKD
VDQGLMDRLQEINRTLSSQLGRLRNIQNTVRQTENLAEQAQAQVENTEGLIDTASNMLHR
ARMAIANVSITPPESTSDPNNMTILAEEARQLAARHKAEADNIEKIAKEANDMSSQAYKL
LLDTLAGENETTNDISDLNRKYNQAKNIARDLEKQANKVSAEAKEAGEKALQIYANLTTL
PSIDTAGLENEAKNIKEEAQELELLIKDKLKNYEDLREDMREKELEVQNLLEKGKTEQQT
ADQLLARADAAKALAEEAAKKGSNTLREANEILNNLKDFDKRVNDNKTAAEEALRKIPAI
TQTIMDANSKTRQAELTLGNAAADAREAKNKADDAERIATSVNNNASATKEIADNTFKTV
TELDKEVDDMLKQLTEAEKELNKKQQTADQDMMMAGMATQAAQEAEDNAKKAKSSVNNLL
NMINDLLEKLARVEPVDQSQLSTIEDTLNAAKNQMKDSDLDRKVSELEKAAEKQASAINE
YNRDINTILKDINNLEDIKKTLPSGCFNTPSIEKP
NT seq 4788 nt   +upstreamnt  +downstreamnt
atggacgtccgcttgaaccttgggctgctcttgctgctgctgatcgggccgtgcggcggc
gccatggacgagtgcgcggatgagcagagcgggcggccccagcgctgcatgcccgagttc
gtcaacgctgcttttaacgccaccgtggtggccacgaacacgtgcggcagcccggccgag
gaatactgcgtgcagaccggcgtcaccggggtcaccaagtcttgccacctgtgcgacgcc
tcccagcctcacctgcagcacggcgctgccttcctcaccgactacaacaaccaggccgac
accacctggtggcagagccagaccatgctggccggcgtccagtaccccagtaccattaat
cttactctccatctcggaaaggcctttgatatcacctatgtacgcctaaagttccatacc
agccgtccagagagctttgccatttacaagcgcactcgggaagatggtccatgggtgccc
taccaatattacagtggctcctgtgagaaaacatatcacaaacccaatcgaggttttgtc
aagagttgggaagatgaacagcaggctgtttgtacagatgagttcagtgacatctcacca
ctcaccggtggcaatgtggccttctcaacactggagggaaggcctagcgcttataacttt
gataacagtcctgtcttgcaggagtgggtcacagctacagatatcagagtaagcctcaat
cgcctgaatacttttggagacgaagtatttaatgaccccaaggttctcaaatcctattat
tatgcaatttctgattttgctgtgggtggccgatgcaaatgcaatggccatgcaagtgag
tgtgtgaagaatgaatatggaaagcttgcttgcagttgcaaacacaatacctttggggtt
gactgtgagaaatgccttcctttctacaatgaccggccttggcgaagagctacagctgag
agtgccaatgaatgtttacgctgtaactgcaatggacgatcacaggagtgttactttgat
cctgaactgtaccgatccaccggccatggtggccactgcacaggctgttttggtaacact
gatggaccaaactgtgaaagatgtcgggagaacttctaccgcctggggagtgaggagagc
tgcctgccatgtagctgcagtcctgtgggctccctcagcacacagtgtgacaattatgga
cgctgcagttgtaaacttggtgtgatgggtgacaagtgtgataggtgtcagcctggcttc
cattctcttacggaggctggatgcaggcgctgctcctgcaatccagctggcagcacagat
gagtgcaatgtagaaacaggccgctgcacttgtaaagacaatgtggaagggttcaactgt
gaaagatgtaaacctggcttttttaatctggattctgacaatcctaggggatgtattccc
tgtttctgttttggacattcctctgtttgtaccaatgccgtcggatacagtacctccaaa
attacatccaccttccaaacaggaaaggaaaactggcatgcggaacagagagatggctct
gaaatctccattcgatggatacctgagactcaagaaatatctgtaatctcagatacacct
tttcccatctatttcagcacaccaggcaaattccttggaaatcaattgctaagttatggg
caaaacctgtcattctcttttcgggtcaataagcgagacactcgcctttctgctgaggac
atagtccttgaaggtgctggactaagagtatctgtacctttgattgctcaaggcaactcc
tatcccagtgagaacactctgaaatattcattcaggctccatgaagcaacagattacccc
tggaggccttctcttactccctttgaattccaaaagctgctccataacttaacagctatc
aagattcgtggaacctacagtgagaggagtgctgggtatttggatgatgttactcttgtg
agcgctcaccctgggcatggaataccagcaacttgggtggagaattgtatgtgtccagca
ggatacttggggcagttctgtgaaacctgtgcccagggctacagaagggagactccaaat
ctcggaccttatagtccttgcgtgccatgtttctgcaatgagcacagtgaaacctgcaac
cctgaatctggagcatgtgactgcagagataacactgcaggtcctcactgtgagaagtgc
agtgatggttattacggtgatgccaccacaggcacctcttcagattgccagccatgtcca
tgtcccgggggttcaagctgtgctgtagttcccaagaccaaggaagtggtctgtaccagt
tgtccagctggaaccacaggtaaaaggtgtgagctgtgtgatgatggttattttggagat
cctcttggccaaaatggccccgccaggccctgccgcctctgccactgcagtgacaacatt
gatcccaatgcagttgggaattgcaaccgcttgacaggagaatgtttgaagtgcatttat
aacacagctggtttctactgtgaccgatgcaaagatggcttctttgggaatcccttagct
cagaatccagaggataagtgcaaagcttgcaattgtaatccttacggcacggcaaattta
cagagaagctgcaatcaagtaacaggccagtgtgaatgcctttcacatgtcacagagagg
gactgcagctcctgcgaaccaggtttctacaacctgcaaagtgggcgtggctgtgaaaga
tgtaactgccatcctctgggctccactaatggccactgtgacattcagaccgggcaatgc
gagtgccagccaggcgttaccggccagcgttgtgagaggtgtgaaggcaaccattttgga
tttggtcctgaaggctgcaaaccttgtgactgtaaccctgaaggttcccgctcccttcag
tgcaaagaagatggccattgtgagtgcaaagaaggctttgtgggaatccgctgtgaccag
tgtgaagaaaactacttctacaatcgatcctggcctggttgtcaagaatgtcctgcatgt
tacagattggtgaaagataaggttgaggagcaacgggggaggctgcgcaatctggaaaat
cttatagctaacataggaacaggtgatgacatcataactgaccaggcttttgaagataga
ctgaaagaagctgaacgagaagtcatggacttacttcgagatgcccaaagtatcaaagat
gtcgaccaggggttgatggatcgtctgcaggaaattaacagaaccctttcaagtcaactt
ggtcggttgaggaacatccagaatacagttaggcagacagaaaacctggctgagcaagcc
caagcccaggtagaaaacacagaggggctgattgacaccgcttcaaatatgctccacagg
gcaaggatggctattgccaatgtgtctatcactccaccagaatcaaccagtgaccccaat
aacatgactatcctggcagaagaagctcggcagttggctgcacggcataaagcagaagca
gataatattgagaaaatagctaaggaagcaaatgatatgtcatcacaagcatataagcta
ctcttggacacactagcaggagagaatgaaacaactaatgacatcagtgatctaaataga
aagtataaccaagcaaagaatattgcccgagacctagaaaaacaggcaaataaggtctca
gcagaagcaaaagaagctggggaaaaagctctacagatctacgcaaatctcaccactctg
ccatccatagacactgcagggctagagaatgaggcgaagaacatcaaggaagaagcccag
gagttagaactgctcattaaagacaaactaaagaattatgaagatctgagagaagatatg
agagagaaagaattggaagttcagaatcttttggagaaaggcaagacagagcagcagact
gctgatcagcttttggctcgagcagatgctgccaaagctttggctgaagaagctgccaag
aagggaagcaatacactccgggaggccaatgagatcctgaacaatttgaaagactttgat
aagcgtgtgaatgataacaagaccgctgctgaggaagctcttaggaaaattcctgccatt
acccagaccattatggatgcaaacagtaagacccgccaagcagaactgacactaggcaat
gcggctgctgatgccagagaagcgaaaaacaaagccgacgatgccgagagaattgctacg
tctgtaaataataatgctagtgccacaaaggagattgctgacaacacctttaagactgtt
actgagttggacaaagaagttgatgacatgctaaagcaattgacagaagcagagaaagag
ttaaacaagaaacaacaaactgctgatcaagatatgatgatggcaggaatggctacacaa
gcagctcaggaagcagaagataatgcaaagaaggcaaagagctctgtgaacaatttgctg
aacatgattaacgaccttcttgaaaaattagcacgagtagaacctgtggaccagagtcag
cttagcaccattgaagatactttaaatgctgcaaaaaatcagatgaaggatagcgatcta
gaccggaaagtatctgaactagagaaagcagctgaaaagcaagctagtgccatcaatgaa
tacaacagggacatcaacaccattttgaaagacattaacaatctagaggacatcaagaag
accttgccaagtggctgtttcaatactccatccattgaaaaaccctaa

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