Pituophis catenifer annectens (San Diego gophersnake): 139314945
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Entry
139314945 CDS
T11059
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139314945 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139314945 (TPR)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139314945 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
TPR
Nucleoprot-TPR
CEP162_coil_mid
Motif
Other DBs
NCBI-GeneID:
139314945
NCBI-ProteinID:
XP_070797063
LinkDB
All DBs
Position
Unknown
AA seq
2366 aa
AA seq
DB search
MAAVLQQVLERAELTKLPKAVQGKLERFLADQQSEIDGLRTRHERYKVDSEQQYFEVEKR
LAQSQERLVNETQECQNLREELTKLNEQLKKLTEKNKELEAAQDHNVAIQSQLTRAREEL
EAEKRDLVRTSERRAQELEHLNEDVKRLNEKLTATNTAKIELQLKLDELQTSAFSVKHRE
QRWEQEKELLQNQNTWLNTELKAKTDELLVLGLEKGSEILELKYGLENKKEEVSRLEEQV
TGLKQSNGNLQKHVEDLLEKLKEAKEQQASMEERFHNELNAHIKLSNLYKSAADDLEAKS
NELTQAVEELHKLLKEAGEANKETQDRLAEMEQVKATVEKELKEKISKLEKELDNANDLV
SATKRKGAILSEDELAAMSPTAAAVAKVVKPGMKLTELYNAYVEAQDQLLLEKLENKRIN
KYLDEIVQEVEAKAPILKRQREEYERSQKAVASLSGKLEQAMKEIQRLQEEADKANKHSS
VFERENQRFEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQRLVSY
RNIEELQQQNQRLLVALRELGEAKEKEEQETTSSKISELQNQLGEAITELEKLREARRHQ
MQLVDSIVRQRDMYRILLAQTTGVAIPLQASSILPEDLSLTSTPKRLSGSLPASTPTSVP
VIESTEAAEAKAALKQLQEFFENYKKEKAENDKLLNEQNEKLQEQVTDLKSQNTKISTQL
EFASKRYEMLQDNVEGYRREITSLHEKIQKLSATTQKQEQIINTMTQELRGANEKLNVAE
VRAENLKKEKDIFKMAEIRLTQQKESLIAEHRGQNLLLTNLQSIQVILEKGETETRHRLN
NQIEKLEREIAQLKKKLENEVEQRHTLSKNQDIHLLDAKRQCETEVNLHANTKELLKNAQ
KEIAALKQQLHNMEAQIASQSLQRAPGQGQSSIGEDVDDLVSRLRQSDDQVNDLKERLKT
ATSNVEQYRTMVVSLEESLNKEKQVTEEVRATVETRLKESSEYHSQLEKKLMEAEKEKQE
LQDEKRKAIENMEQQLSELKKNLSNMKSELQEALQRANAALSNEQQAKRDCQEQAKIAAE
AQSKYERELMLHSSDVEALQAVKEQVAKNSTIKQQLEEAAQKAESTLRESRASWEERERA
LKDEASKLASRCEDLEKQSQLLHEQLETLSNKMMASMKEGGSGALNVSLSEEGKSQEQMV
EILRFIRREKEIAETRFEVAQVESLRYRQQVEHLERELHELQQSLNAEREKVQVTAKTIA
QHEELMKKTETMNVLIETNKILREEKEKLEQELQQMQAKVRKLEADILPLQESNAELSEK
SGMLQAEKKLLEEDVKRWKARTQHLLSQQKDADVEEYRKLLSEKEVNNKRIQQLSEEIGR
LKAEIARTNASLTTTQNLVQSLREDLTKTKTEKENLQKDLEMKVVDIQEKVKTITQVKKI
GRRYKTQYEELKAQHDKMVAETATQAFAEKPEQHISDKEHQEMKEALNQAEVKIKALEGQ
IESLQKTLGEKDTEVKNLQEQISQLQSDLSRLRQDLQEKTTQEEQLRQQVTEKEEKTKKT
LLAAKQRIAQLAGAKDQLTKENEEWKQKSSTLEEQKTELEVRMSALKSQYEGRICRLERE
LREQQERHHEQRDEPPESINKAPEQQRQITLKSTQAAGDRGIASTSDPPTANIKPTPVVS
TPSKVTAAAIPGNKPTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPVE
HVPVFGSTSGSVRSTSPNVQTSLSQPILTVQQQSQATAFVQPTQQSHPQIEPTAQEPSPA
IMEVVQSSQMERPSTSTAVFGTVSATPSSSLPKRAREEEEENTVENSEQIPEEMVDLPLA
KKLRTVQRVGPEEEVTAEESTDGEIEAQAYNQDSQDSIGEGVTQGEYTPMEDSEETSQSL
PIDLGPLQSDQQNTTSSQECQGKRDDVIVIDSDDEEDEDEENDGEAEEYEDEEEDDEDDD
DEDTGMGDEGEDSNESTGSVDGNDGYEADDAEGADGMDPSTETEESIAGGENSQRAADSQ
NCGDGSTGTVESSFSQESPREQQPTSASERQVPRPPRPHPLPPRLTIHAIPAPPQELGPP
VQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQ
VAGVPRFRFGPPEDMPQTSGQSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQV
AAPVSVFTESTSADASEHASQSVPMVTTSTGNLSTTSESGTGDDGDEVFVEAESEGISSE
VGLDIDSQQEEESSQTPDESDLPSTSQDPPSSSSADTSSNHPKPFRRVRLQPPTLRAGVR
GRQFNRHRGITHAMGGRGGLNRGNIN
NT seq
7101 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggttctgcagcaggttttggagcgcgctgaattgaccaagttgcccaaagcc
gtgcagggcaagttagagcgattcctggccgatcagcagagcgagatcgacgggctccgt
accaggcacgagcgctacaaggtggacagcgagcaacaatactttgaagttgaaaaacga
ctggctcagagtcaggagaggcttgttaatgaaacacaggaatgtcagaatcttcgagaa
gagctcaccaagcttaatgagcaattgaagaagttaactgagaaaaacaaggaactggaa
gctgctcaagatcacaatgtggccatacagagtcagctcaccagagcaagagaagaattg
gaagcagagaagagagatttagtccgaacgagtgaaagaagagctcaagaactggaacat
ttaaatgaggatgttaaacgtctgaatgagaaacttacagcaacaaacactgcaaaaata
gagcttcagttaaaactggatgagcttcagacatcagccttttctgtaaaacatcgtgag
cagaggtgggaacaagaaaaggaactattacagaatcagaacacttggctgaatactgaa
ctgaaggcaaaaacagatgagcttttggtccttggtctagaaaaaggatctgaaatcttg
gaactcaaatatggcctggagaacaagaaagaggaggtttccagactggaagaacaagtc
actggactaaaacaatctaatggcaatctgcaaaaacatgtggaagatcttttggaaaaa
ttaaaagaggcaaaagaacaacaagctagtatggaagagagattccacaatgaactaaat
gcccatatcaagttatctaatttatacaagagtgctgcagatgacttggaagcaaagagt
aatgagttgactcaggcagtggaggagctgcacaaacttctcaaagaggctggtgaagct
aacaaagaaacacaggatcgtttggctgagatggagcaagtaaaggctacagttgaaaaa
gaactgaaggagaaaattagcaagttggagaaagagttggacaatgcaaatgatctagtt
tcggctaccaagcgaaaaggagccatactttcagaggatgagctggcagctatgtcgcct
acagctgctgctgttgcaaaagtggtcaagcctggtatgaaattaactgagctttacaat
gcctacgtagaagctcaggatcagctgctgttggaaaaattagagaataagaggatcaat
aaatatttggatgaaatagtgcaggaagtggaagccaaggcacccattctgaagcgtcag
cgagaagaatacgaacgctcccaaaaggcagtggcgagtctttctggtaaacttgagcaa
gctatgaaggaaattcagcgcttacaagaagaggctgataaagcaaacaagcattcttct
gtctttgaaagagagaaccagaggtttgaaattcaagtcaaagatctttcacaacagata
agggtattattgatggagcttgaagaagcccgaggtaatcatgtcatccgtgatgaagaa
gtcagttctgcagacatcagcagctcttctgaagtaataagtcagcgcctggtttcctac
agaaacattgaggaacttcagcagcaaaatcaacgcctcttagtagcacttcgagagctg
ggagaggcaaaggagaaagaagaacaagaaaccacttcatctaagatttctgagctccag
aatcaacttggagaagctattactgagttagaaaagctgcgtgaggcacgccgccatcaa
atgcagcttgtagattccatagtgcgtcagcgtgacatgtatcggattttgctggcccaa
actactggagttgccattccattgcaagcttcaagcatcttgcctgaggacctgtctctg
acatcaacccctaagcgcctgtcaggttcccttccagcttcaactccaacatcagtccca
gtgatcgagtcaactgaagcagcagaagcaaaggctgctcttaaacagctgcaggaattt
tttgagaactataagaaagaaaaggcagagaatgacaagctgctgaatgaacaaaatgag
aagcttcaagaacaggttactgacttgaagtcacagaatacaaagatttctacccaactt
gaatttgcctctaagcgttatgagatgttgcaagataatgtagagggatatcggcgagag
atcacatcactgcatgagaaaattcagaagctgtcagcaactactcaaaagcaagaacag
atcatcaacacaatgactcaagaattaagaggagccaatgaaaaattaaatgttgcagag
gtgagagcagagaatttgaaaaaggaaaaagatatttttaaaatggccgaaattcgtttg
actcagcaaaaagaatctttaatagcagaacatagaggacaaaatctgctccttactaat
ctgcaatctattcaggtaattttggaaaagggggagacagaaactcgacacaggctcaat
aatcaaatagagaagttggaaagagaaatagcccagctgaagaaaaaactggaaaatgag
gtggagcaaagacacacactttccaaaaatcaggatattcacctcctggatgctaaaaga
cagtgtgagactgaagtgaatcttcatgctaatacaaaagagctgctgaagaatgctcaa
aaggagatagcagcattaaagcagcagctccacaatatggaagctcaaatagcttctcag
tcattgcagagagctcctggccaaggtcagtctagtattggagaggatgtggatgatctt
gtaagtcgattgaggcaatctgatgaccaagttaatgatttgaaggagaggctgaagact
gccacaagtaatgtggagcagtaccgaactatggttgtgagccttgaagaatcccttaac
aaagaaaagcaggtgactgaagaggttcgggccactgttgagacccgcttgaaagagtcc
tcagagtatcattcccagctagagaagaaactaatggaggctgagaaagaaaaacaggag
cttcaagatgaaaaacgtaaagctatagaaaacatggaacagcagctttccgagttaaag
aaaaacctctccaatatgaagtctgaacttcaggaagctctccagagagcaaacgcggca
ctcagcaatgaacaacaagctaaacgggactgccaagagcaagcaaagatagctgctgaa
gctcaaagtaaatatgaacgggagctgatgcttcattcttctgacgttgaagctttacaa
gctgtcaaggagcaagttgcaaagaattccacaataaagcagcaattagaggaagcagcc
caaaaagcagaatccacattgcgagagagcagagcttcatgggaagaacgagaaagagca
ttaaaggatgaagcttctaagcttgcgtctcgctgtgaagacttagagaaacaaagccaa
ctgttgcacgaacagctggaaactctgagcaacaagatgatggcttcaatgaaggaaggc
gggtcaggagccctgaatgtgtctctcagtgaagaaggaaaatcacaagaacaaatggta
gaaattctcaggtttattcgcagagaaaaggagattgcagaaactcgatttgaggttgca
caagtagagagcttacgctaccgccagcaggtggaacatttagaaagagagctgcatgag
ctgcagcaaagtctgaatgcagagagggagaaagtacaagtgactgcaaaaacaattgct
caacatgaagagttaatgaagaagacagagacaatgaatgttttgatagaaacgaataag
atattaagagaggagaaagagaaattggaacaagaacttcagcaaatgcaagcaaaagtg
cgtaaactggaagctgatatcttgcctctgcaagaatccaatgctgagctcagtgagaaa
agtgggatgcttcaagcagagaaaaagctgctggaagaggatgtcaaacgatggaaagcc
cggactcaacatttactgagccaacaaaaagatgcagatgttgaagaatatcggaagctt
ctttcagagaaggaggtgaacaacaaacgcattcagcagctaagtgaagaaataggcagg
cttaaagcagaaattgcaagaacaaatgcatcactgacaacaactcagaatctggtgcag
agcctccgggaagatctaacaaaaacaaaaacagaaaaagaaaaccttcaaaaggacctg
gagatgaaagtagtagacatccaagagaaagtcaagacaataactcaagtcaagaaaatt
ggacgtcgctacaagactcaatatgaagagctgaaagcacagcatgataagatggttgct
gagactgccacacaggcttttgcagagaagccagaacagcatatttcggacaaagaacat
caggagatgaaagaggctctaaaccaagctgaggtcaaaataaaagctttagaggggcag
attgaaagtctacagaagactctaggagagaaggacactgaagtaaagaatcttcaggag
caaatatcccagctgcaatcagacctttcccgccttcgtcaagatctacaggaaaaaaca
acacaggaagaacaactcagacaacaagtcactgaaaaagaggagaaaactaaaaagaca
cttctggctgccaagcagaggattgcacagctggcaggggcaaaagatcagctgactaaa
gaaaatgaggaatggaagcaaaagagcagcacattggaggaacaaaagacagagttagaa
gttcggatgagtgcacttaaatcacaatacgaaggccgaatttgtcgtctagagcgagaa
ctcagagagcaacaagagagacatcacgaacagcgagatgagcctccagaatctattaat
aaggctccagaacagcaaaggcagatcactcttaaatcaactcaagctgcaggtgaccga
ggaatagctagtacttcagatccaccaacagccaacatcaagccaactcctgttgtgtct
accccaagcaaagtgacagctgctgccatacccgggaacaagcccaccccaagggctagc
atccgtccaatggttacacctgctacagtcaccaatcctacaactactccaacggccacc
gttatgccaacaacacaagtggagactcaggaagcaatgcagtcagaaggaccagttgaa
cacgttccagtctttggaagcacaagcggatccgtgcgttccacgagccccaatgtgcag
acatctctttcccagcccatattgacagttcagcagcagtctcaggccacggctttcgta
cagcctacccaacagagtcatcctcagatcgaaccaacggctcaagaaccgtccccagcc
atcatggaggtggtgcagagctcccagatggaaagaccttctacctcaacggcagtgttt
ggcacagtttcagctactcccagttcgtctctgcccaaacgagcacgagaggaagaagag
gagaatactgttgaaaactcagaacagattcccgaggaaatggttgatctgcctcttgca
aagaaactcagaactgtgcagagagttgggccagaggaggaagtaactgcagaagagagc
acggacggagaaatagaagctcaggcttacaatcaggattcacaggattccattggcgaa
ggtgtcactcagggcgagtatacacctatggaggatagtgaggaaacttctcagtccctc
cctatagaccttggacctcttcaatcagatcagcagaatacaacctcatcccaagagtgt
cagggcaagagagatgatgtcattgtcattgacagtgatgatgaagaggatgaagatgag
gaaaatgatggtgaagcagaagaatatgaagatgaagaagaagatgatgaggatgatgat
gatgaagacacaggaatgggggatgaaggcgaagatagcaatgaaagcactggcagtgtg
gatggtaatgatggatatgaagcagatgatgctgagggtgcagatggaatggatcccagt
acagaaactgaagagagtattgctggaggtgaaaatagccagagggcagctgactcccag
aactgtggtgatgggagcacaggtaccgtagagtcttcattctctcaggaaagcccaagg
gaacagcaaccaacctctgcttctgagagacaagttccccgtccacctcgacctcatcct
ttacctccacgattaactatccatgctattcctgctccacctcaggaactgggacctcca
gtgcagaggatacaaatgactcggaggcagtctgtgggacgtggactccaactaactcca
ggcataggtggcatgcagcagcatttctttgatgatgaagaccggacagttccaagcacc
ccaacattggtggtaccacatcgtacggatggatttgcagaagcaattcactctcctcag
gttgctggagttcctcggttcaggtttgggcctcctgaagatatgccacaaacttctggc
caatcagatcttggtcaacttgcatcacaaggagggctaggaatgtatgaaacacctctc
tttcttgcccatgaagaagaatcaggaggtcgtagtgtcccaacaactccactacaagtt
gcagcacctgtgtctgtatttactgaaagcacctctgctgatgcttccgagcacgcctcc
caatctgttccaatggttacaacttccactggtaatttatcaaccacttcagaatctgga
acaggtgatgatggtgatgaggtttttgtggaggcagaatcggaaggaatttcttcagag
gtaggtctagacattgatagccagcaagaggaggaatcatctcaaactcctgatgaatca
gatcttccttctaccagtcaagatccaccttctagttcatctgcagatacaagcagcaat
catcccaaacccttccgacgtgttagacttcagcctccaaccttaagggctggagttcgt
ggtcgtcagtttaatagacacaggggtataactcatgcaatgggtggcagaggaggcctg
aacagaggcaatattaattaa
DBGET
integrated database retrieval system
