Pituophis catenifer annectens (San Diego gophersnake): 139314991
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Entry
139314991 CDS
T11059
Name
(RefSeq) protocadherin alpha-10-like
KO
K16493
protocadherin alpha
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcae03036
]
139314991
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139314991
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
139314991
Cell adhesion molecules [BR:
pcae04515
]
Cadherins
Protocadherins
139314991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Cadherin_C_2
Cadherin_CELSR2_9th
Ig_CLSTN
Ig_Cad99C_N
Sde0182_C
Motif
Other DBs
NCBI-GeneID:
139314991
NCBI-ProteinID:
XP_070797111
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MLTWPKGLLQLLLLHTAWEMGSGQLHYSVLEESQHGTFVGRIAQDLGLEVSKLVPRMFRM
LSKGEKDYFEVNLQNGILFVNSRIDREELCAKNADCVLHLEVIVEKPLAFFHVEVEIKDM
NDNPPIFSAREQILSIAELITSGTQFLLEGASDADIGTNAVLTYKLSPNNHFSLDSGSDE
DETNSVVLVLKVPLDREESPVHHLVLTATDGGEPKLTGTVQLVIKVLDVNDNPPVFNQSV
YRIKLLENTASGSLVINLNAIDLDEGINREMSYFFSNKVPLHFKNTFGINTDTGEIKVIE
KLDYEDTNFYELHIVAEDKGSPPLSKQCKVLIDILDINDNIPEVFVNSISVPLPEDSTLG
TVVAIISALDKDSGINGQVRCFLWPTGVPFKLKFTFKNYYSLILDATLDREQVAEYKFVV
TVEDQGIPPLSSSITLLVPISDINDNAPAFTQPSYTVFVKENNPPGAHIFTVSALDPDVA
GNALITYWIDEKLWPLSNYISVHSESGKLYALQSLDYEELKLLEFQVRAKDAGMPTLCGN
ATVQVFVMDENDNAPAMSGSSEENLILLVVPVMPGHIVGKIHALDADSGYNAWLRYELVE
ESSGPWSVGQYSGEVSTKYSLGESEESRIQSLLVLVKDHGKPQLSATATLSVSLVTSGQT
IKTDITLPWSGENFVPLVDSINVYLIIAICSVSSLFLLSTLIYVALRCHCKAKESMVYGP
GMATLVCASEVGSWSYSNRHSHILAGVSAEAGAKSDLMIFSPNIPVFANNGEFRNGTELI
SDSAKEVSCAHCGVFDIK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcttacctggccgaaggggctgctgcagctgcttctgctccacactgcctgggaaatg
gggagcggtcagctccattattctgtgctggaggaatcccagcatggcacctttgtgggc
cgcatcgcccaggatctggggttggaggtgagcaagctggtgcctcggatgttccggatg
ctgtccaaaggagagaaggactattttgaggtaaacctgcagaatgggatcttgtttgta
aattcccggatagacagggaggagctgtgtgccaagaatgcagactgtgtccttcacctg
gaggtgattgtggagaaacctctggcgttcttccatgtggaggttgaaattaaagacatg
aatgacaatcctcccatcttctcagccagggaacagatcctgagtatagcagaactcata
acgtctggtacccagttcttattagaaggagcatctgatgcagatattggtactaatgct
gtgctaacttacaagctcagcccaaacaaccatttttctcttgattcaggaagtgatgaa
gatgagaccaactctgtagttcttgtactgaaggttccacttgacagagaggagagccct
gtgcatcatttagtactgacagccactgatgggggtgaaccaaaactcacaggaactgtt
cagctagtcatcaaggtgctggatgtcaatgacaaccctcctgtatttaatcaatctgtt
tataggataaaattgctagaaaacacagctagtgggtcattagttattaatctgaatgct
atagacttagatgaggggattaatagggaaatgtcttatttttttagtaataaagtacct
ctacattttaaaaacacatttggaattaatactgatactggggaaatcaaggtgattgaa
aaattggattatgaagacacaaatttctatgaacttcatattgttgcagaagataaaggc
agtcctccattgtccaaacaatgtaaagttcttatcgacatattggacataaatgacaat
attcctgaagtatttgtcaattctatatctgtgccattaccagaagattccacactaggg
actgtggtagccattatcagtgctttagacaaggattctggaatcaatggacaggtaaga
tgttttttatggcccactggagtacccttcaaactcaagttcacattcaagaattactac
tccctgattcttgacgcaactttagatcgagaacaggtggctgagtacaagtttgttgtg
acagtggaagatcaaggcattccaccactctcttctagtatcaccctcttagtgcctatc
agtgacataaatgataatgctccagctttcactcaaccctcctacacagtctttgtgaag
gagaacaatccccctggtgctcacatcttcacagtatctgccttggatccagatgttgct
gggaatgctctgatcacctattggatagatgagaagctctggccattgtcaaactacatc
tctgtacattcggagagtggaaaactttatgctttgcagtccttggactatgaggagttg
aaactgctggagtttcaggtgagagccaaggatgctggaatgcccaccttgtgtggcaat
gcaactgttcaagtctttgtgatggatgagaatgacaatgcacctgctatgtcaggatct
tcagaagagaacctgattcttctagtggtccctgtgatgcctgggcatattgtaggcaag
atccatgccttggatgcagattctggatacaatgcatggctaagatatgaactagttgaa
gaaagtagtggcccatggtctgtgggacagtatagtggtgaggtgagtaccaaatattct
ctgggtgagtcagaagaaagcagaatccagagtctgttggttcttgtgaaggaccatgga
aaacctcaactctcagccacagctaccctgagtgtgtcacttgtgacaagtggtcagaca
atcaaaacagatattaccctcccatggtcaggggagaactttgtgcccctggtggactca
atcaacgtctatctgatcattgccatctgctctgtttccagtctcttcttgctgtccact
ctcatctatgtggccctgcgatgccactgcaaggcaaaggaatccatggtttatggccct
ggcatggccaccctggtgtgtgccagcgaagtgggcagctggtcctattccaatcgccac
agccacatcctggcaggtgtgagtgcagaggctggtgccaagagtgaccttatgattttc
agtcccaacattcctgtttttgcaaataatggggaatttaggaatgggacagaattgatc
tcagattcagctaaagaggtgagttgtgctcattgtggagtctttgacattaagtaa
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integrated database retrieval system
