Pituophis catenifer annectens (San Diego gophersnake): 139315001
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Entry
139315001 CDS
T11059
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139315001
Cell adhesion molecules [BR:
pcae04515
]
Cadherins
Protocadherins
139315001
BRITE hierarchy
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GFIT
Other DBs
NCBI-GeneID:
139315001
NCBI-ProteinID:
XP_070797126
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Position
Unknown
AA seq
811 aa
AA seq
DB search
MEVSRPSRQVVLFFISLCSSGMLCEPFRYSVPEEKKAGSIVANVLKDLKVDVKELSARRA
QLISKSSRQDFQLDPHSGNIILRDKIDREALCGLSDPCTLFSEILLENPVQFFKIEVQVE
DVNDNSPIFSQNQFRFEIPEQTPINARFPLETAHDLDKGKNAIQNYILSTSEYFKLDIQS
QNNGRKYSELLLAKPLDREVIPQFILTLEAVDGGIPRKTGTAQIIIDILDNNDNVPQFEQ
TVYKVQLMENSHPGSLVAKVEATDKDIGSNAHIIYTFSQAPADVLQSFKLNNHTGEITLV
GKIDYEENHNYELSIKATDGGGLSAYCKVLVDIEDENDNAPEIIVSSITNPLPENSPPET
LVALFGIRDQDSGDNGRTTCSTEKNLPFILKLTENNYYQLVTQQPLDREQMSHYNITITA
IDQGSPRLTSITVISIQLSDINDNPPMFERGFYNLHLRENNIPGLFIGSVHAADVDTEQN
AKVTYSLLFGKIREEPASSYISINSETGNLYAIRSIDYEDIQDFQVMVRAVDKGSPPLSS
ETMVRVLITDENDNAPFILCPLQNSTSPSNDLVPRGAETGYLVTKVVAVDRDSGQNSWLS
YQLLKATDPSLFTVGTQNGEVKTMRPVNIRDSFKHTLIVAVRDNGHPPQSASATLRILLV
DGFSDPYVKIMDNPKDEVLQEGDHTLTLYLIICLVAISSIFLLSVTVFIATKFQKRRKFL
RSSHSASNVGPNLQEKCVDPNTGTSSQAYSYEVCLTDGSLSSEFKFLRPFFPLFTMEHQK
CMLNPQIRNDCHDLPNQLEEREHISQVSIIC
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggaagtctctcgtcctagcaggcaagtggtcttattctttatttctctatgtagctct
ggtatgttgtgtgaaccattccgctattcagtgcctgaggagaagaaagctggatcaata
gtagcaaatgtgctaaaagatttgaaagtagatgtgaaggagctttctgctcgcagagca
cagttgatttctaagagttccaggcaggatttccagctggatccccattctggaaatata
attttgagggataaaattgatcgagaagctttgtgtggtttgagtgatccttgcactctg
ttctctgaaattttgctggaaaatcctgttcagttcttcaaaattgaagttcaggtagaa
gatgtcaatgataattcccctatattctctcagaatcaattccgttttgaaatacctgag
cagactcccataaatgcacgtttccccttggagacagcccacgatttagacaaaggaaaa
aatgctatccagaactatatacttagcacaagcgaatattttaagctggacatacaaagt
caaaacaatggcaggaaatattcagaactgcttttggcaaaaccgttagaccgcgaggtg
atccctcagtttattctcactctggaagctgtggatggagggattccaaggaaaactggc
acagcacagataattattgatattctggataacaatgataatgtgccccaatttgaacaa
acagtatataaagtgcagctaatggaaaatagtcatccaggttcattggttgctaaagtt
gaagccactgacaaagacattggatccaacgctcacatcatttacacttttagccaagca
ccagcagatgtactccaatcattcaagttaaacaatcatactggggaaattacactcgta
gggaaaattgattatgaagaaaatcataattatgaactcagcatcaaagccacagatgga
ggaggattgtccgcttactgtaaagttcttgttgacattgaagatgagaatgacaatgct
ccagaaataattgtatcatccatcactaatcctttaccagaaaattctcccccggaaaca
ctggtggcactttttggcatcagagatcaagactccggagacaatggcagaactacctgc
agcactgagaaaaacctgccttttatactaaaattgactgagaacaattattaccagctt
gtgacgcaacagccattggacagagaacaaatgtcacattataacatcaccatcacagcc
atcgaccaaggttctcccagactcacttcaatcacagttattagcattcaactttcagac
atcaatgataaccctccaatgtttgaaagaggtttctacaatttgcacttaagagaaaac
aacattccaggattgttcatcggatcagtccatgctgcagatgtggacacagaacagaat
gccaaagtaacctactctcttttgtttggaaagatcagggaagagcctgcatcatcttac
atctccatcaactctgaaactgggaacttgtatgccattcgatctatagattatgaggat
atacaagatttccaggtgatggtgagggctgtagacaagggctcacctcccctgagctca
gaaacaatggtccgagttcttatcacggatgaaaatgacaatgcccccttcatcctctgc
ccccttcagaacagcacttctccatcaaatgatctggttcccaggggagcagagacaggc
tacctagtcaccaaagtggtggcagtggacagagattcagggcagaattcttggctttcc
tatcagttgctgaaggccacagatccgagtctcttcactgttgggactcagaatggggag
gtgaaaaccatgaggccggtgaacatccgagacagtttcaaacacactcttattgtggca
gttagggataatgggcatcctcctcagtctgcctctgcgaccctaagaattcttctagtg
gacggcttctctgatccttacgtgaaaattatggataatcctaaggatgaagtcctgcag
gagggagatcatactctaacactgtatttgattatctgtttggttgccatctcatccatt
tttctgctttctgttactgtgtttattgcaaccaagtttcagaagcgaagaaagttctta
agaagttctcattctgcatcaaatgtgggaccaaatttgcaagagaagtgtgtggatcct
aatactggaacatcttcccaggcctacagctatgaagtgtgcttaactgatgggtctctg
agcagtgagttcaagttccttaggcctttctttcctctttttactatggagcatcaaaaa
tgtatgctgaatccacagattagaaatgattgccatgatcttcctaatcaattggaggaa
agagaacatatatcgcaggtgagtataatctgttaa
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