Pituophis catenifer annectens (San Diego gophersnake): 139315004
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Entry
139315004 CDS
T11059
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139315004
Cell adhesion molecules [BR:
pcae04515
]
Cadherins
Protocadherins
139315004
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Other DBs
NCBI-GeneID:
139315004
NCBI-ProteinID:
XP_070797128
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Position
Unknown
AA seq
852 aa
AA seq
DB search
MEVSRPSRQVVLFFISLCSSGVLCEPFRYSVPEEKKAGSIVANVLKDLKVDVKELSARRA
QLISKSSRQDFQLDPHSGNIILRDKIDREALCGLSDPCTLFSEILLENPLQFFKIEVQVE
DVNDNSPIFSQNQFLFEIPEQTPINARFPLETAHDLDKGKNAIQNYILSTSEYFKLDIQS
QNDGSKYSELLLAKPLDREVIPQFILTLEAVDGGIPRRTGTAQIIIDILDNNDNVPQFEQ
TVYKVQLMENSHPGSLVAKVEATDKDIGSNAHIIYTFSQAPADVLQSFRLNNHTGEITLV
GKIDYEINSKYQLSIKATDGGGLSAYCKVLVDIEDENDNAPEIIISSITNPLPENSPPET
LVALFGIRDQDSRDNGRTTCSTEKNLPFILKLTENNYYQLVTQQPLDREQMSHYNITITA
TDQASPRLTSITVISIQLSDINDNPPMFEKGFYNLHLRENNIPGLLIGSVHAADVDTEQN
AKVTYSLLFGKIREEPASSYISINSETGNLYAIQSIDYEDIQDFQVMVRAVDKGSPPLSS
ETMVRVLITDENDNAPFILCPLQNSTSLSNDLVPRGAETGYLVTKVVAVDRDSGQNSWLS
YQLLKATDPSLFTVGTQNGEVKTMRPVNIRDSFKHTLIVAVRDNGHPPQSVSATLRILLV
DGFSDPYMKIMDNPKGEVPQEGDHTLTLYLIICLVAISSIFLLSVMVFIATKFQKQKKFL
GSSHSASNFPMGPNLQEKCVDPNTGTSSQAYSYEVCLTDGSLSSEFKFLRPFFPVFTMEH
QKTLLNPQIRNDCHNLPNQLEEREHITQVQFKVLVFTFKALHGMGPSYLRDRLIPLGLVH
PTRASRGGPVML
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggaagtctctcgtcctagcaggcaagtggtcttattctttatttctctatgtagctct
ggtgtgttgtgtgaaccattccgctattcagtgcctgaggagaagaaagctggatcaata
gtagcaaatgtgctaaaagatttgaaagtagatgtgaaggagctttctgctcgcagagca
cagttgatttctaagagttccaggcaggatttccagctggatccccattctggaaatata
atattgagggataaaattgaccgagaagctttgtgtggtctgagtgatccttgcactcta
ttctctgaaattttgctggaaaatcctcttcaattcttcaaaattgaagttcaggtagaa
gatgtcaatgataattcccctatattctctcagaatcaattcctttttgaaatacctgag
cagactcccataaatgcacgtttccccttggagacagcccacgatttagacaaaggaaaa
aatgctatccagaactatatacttagcacaagcgaatattttaagctggacatacaaagt
caaaacgatggcagcaaatattcagaactgcttttggcaaaaccgttagaccgcgaggtg
atccctcagtttattctcacactggaagctgtggatggagggatcccaaggagaactggc
acagcacagataattattgatattctggataacaatgataatgtgccccaatttgaacaa
acagtatataaagtgcagctaatggaaaatagtcatccaggttcattggttgctaaagtt
gaagccactgacaaagacattggatccaacgctcacatcatttacacttttagccaagca
ccagcagatgtactccaatcattcaggttaaacaatcatactggggaaattacactcgta
gggaaaattgattatgaaataaacagtaaatatcaactcagtatcaaagccacagatgga
ggaggattgtctgcttactgtaaagttcttgttgacattgaagatgagaatgacaatgct
ccagaaataattatatcatccatcactaatcctttaccagaaaattctcccccagaaaca
ctggtggcactttttggcatcagagatcaagactccagagacaatggcagaactacctgc
agcactgagaaaaacctgccttttatactaaaactgactgagaacaattattaccagctt
gtgacgcaacagccattggacagagaacaaatgtcacattataacatcaccatcacagcc
accgaccaagcttctcccagactcacttcaatcacagttattagcattcaactttcagac
atcaatgataaccctccaatgtttgaaaaaggtttctacaatttgcatttaagagaaaac
aacattccaggactgctcatcggatcagtccatgctgcagatgtggacacagaacagaat
gccaaagtaacctactctcttttgtttggaaagatcagggaagagcctgcatcatcttac
atctccatcaactctgaaactgggaacttgtatgccattcaatctatagattatgaggat
atacaagatttccaggtgatggtaagggctgtagacaagggctcacctcccctgagctca
gaaacgatggtccgagttcttatcacggatgaaaacgacaatgcccccttcatcctctgc
cctcttcagaacagcacttctctatcaaatgatctggttcccaggggagcagagacaggt
tacttagtcaccaaagtggtggcagtagacagagattcagggcagaattcttggctttcc
tatcagttgctgaaggccacagatccgagtctcttcactgttgggactcagaatggggag
gtgaaaaccatgaggccggtgaacatccgagacagtttcaaacacactcttattgtggca
gttagggataatgggcatcctcctcagtctgtctctgcgaccctaagaattcttctagtg
gatggcttctctgatccttacatgaaaattatggataatcctaagggtgaagtcccgcag
gagggagatcatactctaacactgtatttgatcatctgtttggttgccatctcatccatt
tttctgctttctgttatggtgtttattgcaaccaagtttcagaagcaaaagaagttctta
ggaagttctcattctgcatcgaattttcctatgggaccaaatttgcaagagaagtgtgtg
gatcctaatactgggacatcttcccaggcctacagctatgaagtgtgcttaactgatggg
tctctgagcagtgagtttaaattccttaggcctttctttcctgtttttactatggagcat
caaaaaactctgctgaatccacagattcgtaatgattgccataatcttcctaatcaattg
gaggaaagagagcatataacccaggtccaattcaaggtattggtattcacctttaaagcc
cttcatggcatgggtccaagctatttgagagaccgtctcatcccactgggattggttcat
cccacccgtgccagtagaggaggccctgtcatgctgtag
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