Pituophis catenifer annectens (San Diego gophersnake): 139315005
Help
Entry
139315005 CDS
T11059
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139315005
Cell adhesion molecules [BR:
pcae04515
]
Cadherins
Protocadherins
139315005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139315005
NCBI-ProteinID:
XP_070797129
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MCASIRFSVPEEKKKGFLVANVIKEMKLKTGELSTRKAHLVAEGIQEYFHLDIHTGNLLI
NDKIDREALCGQNDPCLLLSQLVLENPLDIFNIEIKIEDVNDNAPKFWKNEVKVDIPENI
PINMIFPLELAQDDDLGENSIQNYTLSPNEHFQLEVQKNEDRKDNIYLVLKKTLDRERMS
HLELILMAIDGGVPKKTGTVQININVLDNNDNFPLFSKSEYKAKIKENLPKGTLVIKVEA
TDLDLGSNAQILYSFHQVPERINNLFYLNEITGDITVWGQIDYEKEKSYSMSIRATDGGG
LPGHCNVLIEVEDENDNPPEVSIISLTNALKEDSPPDTMVALFSVRDQDSGDNSKTVCSM
QMNLPFVLKATMNNFYQLVLQSPLDRETVTEYNITITAIDWGSPRLTSTRLINVQISDVN
DNSPLFEKFSYDMQIRENNIPGFLIGSVHALDLDTTLNAKVNYLVVPGKGDGLVTPYISV
NSETGNMYALRSLDYEQIRGFRVTVRACDGGSPSLSSEVIVRIHIIDENDNAPFFLYPLQ
NNTSPCNELLPKSAEAGYLVTKVVAVDADSGQNSWLSYELLKATDPALFSIGVQNGEVKT
RRALNERDTNKQRLVILARDNGLPPQTSTALLNVLLVDGFSDPFLRRVDVSVQEPEEDKT
LTKYLVICLAAVSFVFLVCIVVFIVVKILKKDPQSHFTAAVPHFPPANADTPENCADSQN
GSLSRTYRYDVCLTGGSLSSEFRFLRPLFPVFSVGDVNVPGNNSISAGIQDTSEQVAVNG
AKKEDEHSPLIPCHEQVS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcttcaattcgcttttctgtccctgaagaaaagaaaaaggggtttctggtggct
aatgtcatcaaggaaatgaaactgaaaacaggagagctctccacacgcaaagcacattta
gttgctgagggcattcaggaatacttccatcttgatattcatactgggaatctgttgatt
aatgataaaatagacagagaagctttatgtggccagaatgatccttgtctacttctttct
cagcttgtcttggaaaaccccttagatatctttaatattgaaatcaagatagaagatgtg
aatgacaatgcacccaaattttggaaaaatgaagttaaggtggacattcctgaaaatatt
ccaataaatatgatatttcccttagaattagctcaggatgatgacttgggagaaaatagc
atccaaaattatactcttagtcccaatgagcattttcagcttgaagtacaaaagaatgaa
gatagaaaagacaatatataccttgttttgaagaaaacattagatagggagaggatgtca
caccttgaattgattctaatggctattgatggaggagttccaaagaaaaccggcacagtt
caaattaatattaatgttctggataataatgataactttcctctgtttagtaagtctgaa
tataaagcaaaaataaaggagaatctccctaagggcactcttgtgattaaggtggaagct
acagatctggatttgggttcaaatgcacagatactctactcattccatcaagtgcctgaa
agaataaacaatttgttttatttaaatgaaattactggtgatataactgtttggggacag
attgattatgaaaaagaaaagagttatagcatgagtatcagagcaacagatggagggggt
cttccagggcactgcaatgtactgatagaagttgaagatgagaatgacaaccccccagaa
gtatccatcatatctctgaccaatgctttaaaggaggactctccgccagacacaatggtg
gccctcttcagtgtgagagaccaagactctggagacaacagcaaaacggtctgctccatg
cagatgaatctcccttttgtgctgaaagccaccatgaacaacttttatcaacttgtgctc
caaagtcccctagacagagagacggtcaccgaatacaacatcaccatcactgccattgac
tggggatctcctaggctcacttcaacaagactgatcaatgttcagatctccgatgtcaat
gataactctcccctttttgaaaagttttcatatgacatgcagatcagggagaataatatt
ccaggcttcctcatcggctcagtccacgctctggatctagacacaacgctgaatgctaaa
gtgaattacttagttgtgcctgggaagggtgatggcctggtgaccccttacatctcagtt
aactctgaaactggaaacatgtatgccctccgatccctggactatgaacagataagaggc
ttcagagttactgtgagggcatgtgatggaggttctccttccttgagctcagaagtgatt
gtccgaatccacatcatagatgagaatgacaacgctcccttcttcctgtatcccctccag
aacaacacatccccatgcaatgagctgcttcccaagtcagccgaggctggctatctggtc
accaaagtggttgcagtggacgcagattctggccaaaactcttggctttcctatgaattg
ctgaaggccacggatccagcccttttcagcataggagtacagaatggggaagtgaaaacg
aggagagccctgaatgagcgagacacaaataagcagaggctggtgatactggccagagac
aacggtctccctccacagaccagcacggcattgcttaatgttcttcttgtggatggcttt
tcggatcccttcctaaggagggtggatgtcagtgtgcaagaaccagaagaagataaaact
ttgaccaagtatttggtgatctgcttggctgcagtctcctttgtattccttgtctgtatt
gttgtgtttattgtggtcaaaatcctcaagaaggacccccaaagccattttactgcagct
gttcctcacttcccacctgccaatgctgatactccagagaactgtgctgattcacagaat
gggtcgctttccaggacttaccgttatgatgtctgtttgactggtggatccttaagtagc
gagttccgatttctcaggcccctctttccggtcttttcagtgggagatgttaatgtccca
gggaacaatagtatttctgcaggtatccaagatacttctgagcaggttgcagttaatggc
gcaaagaaagaggatgagcactcacctctcatcccatgccatgagcaagtctcctag
DBGET
integrated database retrieval system
