Pituophis catenifer annectens (San Diego gophersnake): 139315102
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Entry
139315102 CDS
T11059
Symbol
CDH4
Name
(RefSeq) cadherin-4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04514
Cell adhesion molecule (CAM) interaction
pcae04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139315102 (CDH4)
04519 Cadherin signaling
139315102 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139315102 (CDH4)
Cell adhesion molecules [BR:
pcae04515
]
Cadherins
Major cadherins
139315102 (CDH4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_pro
Ig_CLSTN
F59B103_C
NCMAP
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
139315102
NCBI-ProteinID:
XP_070797225
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MACRISTAACVKVSGCSESKGTPYESANLDFKVRNGGALYPTKQVHTPLEQTKVTKGKKN
MTADLQEPGNILLPWRHHPNSYGLRRQKRDWVIPPINVPENSRGPFPQQLVRIRSDKDSE
IHIRYSITGVGADQPPMEVFNIDPVSGRMYVTRPMDREERASYHLRAHAVDMNGNKVENP
IDLYIYVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMTVTANDADDATTANGMVRYRIVT
QTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYTVIVQATDMEGNLNYGLSNTATAII
MVTDVNDNPPEFTSSTYSGEVPENRIEVVVANLSVMDRDQPHSPNWNAVYRIISGDPSGH
FTVRTDPVTNEGLVTVVREVDYEMNRAFMLTVMVSNQAPLASGIQMSFQSTAGVTISVTD
VNEPPYFPTNHKLIRLEEGVPTGTALMTFSAVDPDRFMQQAIRYSKLSDPANWLNINATN
GQIITAAVLDRESAYVKNNVYEATFLAADNGIPPASGTGTLQIYLIDINDNAPDLQPKEA
QICERPNLNVINITAADADIDPNVGPFVFELPSVPSAIRKNWTITRLNGDYAQLGLRIMY
LEAGVYDVPIIVTDSGNPPLFNMSIIKVKVCPCDENGDCTTIGAVAAAGLGTGAIIAILI
CIIILLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQL
QQPENMDHVLNKANGVRRVDERPVGAEPQYPIRPVIPHPGDIGDFINEGLRAADNDPTAP
PYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDWGPRFKKLADMYGGGEDD
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtcgcatcagtactgctgcttgtgtgaaagttagcggctgttcggagagcaaa
ggaacgccgtacgaaagtgccaacttggacttcaaggtgaggaacggcggagctctctac
cccaccaaacaggtgcacacacctttggagcagacaaaagttacgaaaggaaagaagaac
atgacagcagaccttcaagaacctggtaatattttgctcccatggcgtcatcacccgaat
tcttatggactcaggcgtcaaaagagagattgggtcatcccaccaatcaacgtgccagaa
aattcaagaggacccttcccacagcagcttgttaggattcgttcagacaaagacagtgaa
atccatataagatacagcatcacaggggtgggagctgaccagccccctatggaagtcttc
aacattgaccctgtgtcagggagaatgtacgtgacccgtccaatggatagagaagaaaga
gcatcctaccatcttagagcacacgccgtagatatgaatgggaacaaagtggagaatcca
attgatctctacatttatgtcatcgacatgaatgacaacaggccggaattcataaaccaa
gtctataacggatctgttgatgaaggatctaaaccaggaacctacgtgatgacagtgacg
gccaacgatgctgacgacgccaccacagcaaatgggatggtgaggtaccgcattgtgact
caaactccacaaagtccatcccagaatatgtttactattaacagcgagactggagatata
gtgacagtggcagcaggactcgaccgagagaaagttcagcaatacacagtcatcgttcag
gccaccgatatggaaggaaaccttaactacggtctctcaaacacagcgacagcaatcatt
atggtgacagatgtgaacgacaacccacccgaattcactagcagcacctattctggtgaa
gttccagaaaaccggatagaagttgttgtcgctaatttgagtgtgatggatcgagatcaa
ccacactcacccaattggaatgcagtttaccgaataatcagtggagacccttctggtcat
tttacggttaggactgatcctgttaccaatgaaggcttggtaactgttgtgagggaagtt
gattatgagatgaaccgagcttttatgttgacggtgatggtgtccaatcaagctcccctt
gccagtgggatccaaatgtccttccagtctacagccggagtcaccatttcagtcactgat
gtcaatgagccaccctacttcccaacaaaccacaaactcatcaggctggaagagggtgtg
cctacggggacagccctcatgactttttccgcagtggaccctgaccgcttcatgcaacag
gctatcagatattccaagttatcggatcctgccaattggctgaatattaatgccacaaac
ggtcagatcatcacggcagctgtccttgatcgcgagtcagcctatgttaagaacaatgtc
tacgaagccacgttcctggcagctgacaacggtatccctccagccagtggcacgggcaca
ctccagatctacctaattgacatcaacgataatgcccctgaccttcagccaaaggaggcc
cagatatgtgagaggccaaatctgaatgtcatcaacatcacagccgcggatgctgacatc
gatccaaatgtcggccccttcgtctttgagctgccgagcgtgccatctgccattaggaag
aactggaccattacgcgtctaaatggtgattatgctcaactcggcttgcgaataatgtat
ttggaagccggtgtatatgatgttccaatcattgtaacggattccggcaaccctcctctg
tttaacatgtccatcattaaggtcaaggtgtgtccatgtgacgagaatggagattgtacc
actataggagctgtcgctgcagctgggctgggcaccggagccattattgccatcttgata
tgtatcatcattttactaaccatggttctgctttttgtggtatggatgaaacggagggag
aaggaacgtcacactaagcagctactcattgatcctgaagatgatgtccgggacaacatc
cttaaatatgatgaagaaggtggtggagaagaagatcaggattacgatttaagccaactt
cagcagccagagaacatggatcatgttttaaacaaggcgaacggagtcagaagagtagat
gagagacctgtcggtgctgagcctcaatatcctatacggccggtcatcccccaccctgga
gacatcggggactttattaatgagggcctgagagcagccgataatgacccgacagcccct
ccctacgactcccttctcgtctttgactatgaaggaagcggctcaacagcaggatcggta
agctcccttaactcctcaagctctggagaccaagattacgactaccttaatgactgggga
ccgaggttcaagaaactggcggacatgtacgggggtggcgaggatgattaa
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