Pituophis catenifer annectens (San Diego gophersnake): 139315164
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Entry
139315164 CDS
T11059
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139315164 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcae03021
]
139315164 (GTF2B)
Transcription machinery [BR:
pcae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
139315164 (GTF2B)
Prokaryotic type
Archaeal type
TFB
139315164 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
BRF2-like_C_cyclin_rpt
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
139315164
NCBI-ProteinID:
XP_070797320
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MASTSRLDVLPRVTCPNHPDSILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
TKDPSRVGDTQNPLLSDGDLTTMIGKGTGAASFDEFGNSKYQNRRTMSSFDRAMMNAFKE
IASMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PADFRFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccagccgcttggacgttctgcctagagtgacatgtccaaaccacccagat
tccattttagtagaagattatagagctggagacatgatttgtccagaatgtggacttgta
gtaggtgacagagtaatagatgtagggtcagaatggcgaacattcagcaatgacaaagca
actaaagacccatctcgagttggagatacccagaatcctctccttagtgatggagatttg
actacaatgattggcaaggggacaggcgcagctagttttgacgaatttgggaattcaaag
tatcaaaatcgtcgcaccatgagcagttttgaccgtgcaatgatgaacgccttcaaggaa
attgctagcatggccgacagaatcaacctgccccgcaatatagttgatcgaacaaataat
ttatttaaacaagtgtatgagcagaagagcctgaaggggagaagtaacgatgccattgca
tccgcttgtctctacattgcttgcagacaagagggagttcctaggacatttaaagaaata
tgtgctgtttccagaatttccaaaaaagaaataggccggtgtttcaaactcatcttgaaa
gctttagaaacaagtgtggatttgatcactactggagatttcatgtccagattttgttcc
aatttgggtctccctaagcaagtccagatggccgcaacatacattgcgcgtaaagctgtg
gaattagatttagttcctggaaggagtcctatctcagttgcagctgctgctatttatatg
gcttcacaagcctcggctgaaaagagaacacagaaagaaattggagacattgctggtgta
gctgatgttacaataagacagtcatataggctgatttatccacgtgctccagaccttttc
ccagcagatttcagatttgacaccccagtggacaaactgccccagctgtga
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