Pituophis catenifer annectens (San Diego gophersnake): 139315175
Help
Entry
139315175 CDS
T11059
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
pcae
Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139315175 (FUBP1)
03041 Spliceosome [BR:
pcae03041
]
139315175 (FUBP1)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
139315175 (FUBP1)
Spliceosome [BR:
pcae03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139315175 (FUBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
KH_KHD4_2nd
Secretin_N
KH_PARP10_1st
SIMPL
Motif
Other DBs
NCBI-GeneID:
139315175
NCBI-ProteinID:
XP_070797346
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MSDYSTVPPPSSGAPGGGGGGGGAVNDAFKDALQRARQIAAKIGNESGTSVNSNDYSYGG
QKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPEPKKVAPPNNDSFGNQLPPMHQQQRSVM
TEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAK
RLLDQIVEKGRPTPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVM
IQDGPQNTGADKPLRITGDPYKVQQAKEMVLDLIRDQGGFREVRNEYGSRIGGNEGLDVP
IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD
LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS
ISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHG
PHGVVPGPHGPPGPPPGAPMGPYNPAPYTPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPN
PPDPGKPADPNSAAWAAYYAHYYQQQAQPPPAAPPSAPPATQTNGQGDQPNPAPAGQVDY
TKAWEEYYKKMGQQGQPQDYSKAWEEYYKKQGQAVPAPTGAPPTGQPDYSAAWAEYYRQQ
AAYYAQTSPQGMPQHPPAPQGQ
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattattctacggtgccccctccttcttcgggagcacccggcggaggcggagga
ggtggcggggcagtcaatgatgcttttaaagacgcgctgcaacgggctaggcagattgca
gcaaaaattggaaatgaatcagggacatctgtgaattcaaatgattacagttatggggga
caaaaaagacctcttgaagatggagatggctcttggacaagtccgagcagtacaacacac
tgggagggaatgccctctccttttaaagatcaaccagaacctaagaaagttgctccccca
aacaatgattcttttggaaatcagttaccacccatgcatcagcaacagaggtctgtaatg
acagaagaatacaaagttccagatggaatggttggattcataattggcagagggggagaa
cagatatctcgcatacagcaagaatctggatgtaaaatacagattgcacctgatagtggt
gggcttcctgaaagatcttgcatgttgactggaacacctgaatcagtacaatctgcaaag
agattgctcgaccagatagttgaaaagggaagacctacaccaggattccatcatggtgac
ggcccaggaaatgctgtccaggaaatcatgattccagctagcaaagctggattagttatt
ggaaagggtggagaaactataaagcagcttcaagagcgtgcaggtgttaaaatggtgatg
attcaagatggaccacagaacactggagcagataagcctcttaggatcacaggagatcct
tacaaagtccaacaagcaaaggaaatggttttagacctaattcgtgatcaaggtggcttc
agagaggtacgaaatgaatatggatcaagaataggaggcaatgaaggattagatgtacca
ataccacggtttgcagttggtattgtaattggaagaaatggcgaaatgataaaaaaaata
cagaatgatgctggtgtaaggattcaatttaaaccagatgatggaacaacccctgataga
atagcacagatcacaggaccaccagacagatgtcagcatgcagctgaaattattacagac
ctccttcgaagtgttcaggctggcaatcctggaggtccagggcctggtggtcgtggtaga
ggaagaggtcagggaaattggaatatgggaccacctggtggactgcaagaatttaatttt
attgttcccactggaaaaactggattaatcattgggaaaggtggtgaaactatcaagagc
attagtcagcaatctggtgcaagaatagaacttcagagaaatccaccaccaaatgcagat
cccaacatgaaattatttactattcgagggacaccacaacagattgattatgctcggcag
ctcatagaagaaaagattggaggtccagtaaatcctttggggcctcctgtgcctcatgga
cctcatggtgttgttcctgggccacatggaccccctgggccgcctcctggggctccaatg
ggaccttacaatccagctccttatacccctggccctcctggtcctgcacctcatggacct
ccagcaccatatgctccacaaggatggggtaatgcatatccacattggcaaccaccaaat
cccccagaccctggtaagccagcagatcctaattcagcagcatgggcagcctattacgcc
cactactatcaacagcaagcacagccaccccctgcagctccacctagtgcaccacctgcc
actcagactaacggacaaggagatcaaccaaatccagcaccagcagggcaggtagattat
accaaggcttgggaagaatactataaaaaaatgggtcaacaagggcagccacaagattat
tcaaaggcttgggaggaatattacaagaagcaaggtcaagctgttccagctccaactgga
gccccaccgacaggtcagccagattacagtgcagcatgggctgagtactatcgacagcag
gcagcttattatgcccagacaagtccacaaggaatgccacaacatcctccagcaccacag
ggccaataa
DBGET
integrated database retrieval system
