Pituophis catenifer annectens (San Diego gophersnake): 139315231
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Entry
139315231 CDS
T11059
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139315231 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcae03041
]
139315231 (PRPF38A)
Spliceosome [BR:
pcae03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
139315231 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
139315231 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
139315231
NCBI-ProteinID:
XP_070797439
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRYTGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDQLLHDERVCDIILPRLQKRYVLEEAEQLETR
ISALEEDMDDVESSEDEEEEDEKLDRAPSPDHRRRGYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccggacggtaaaagacgcgcacagcatccacggcactaacccgcagtatctg
gtggagaagatcatccgcacccgcatctacgagtccaagtactggaaggaagaatgcttc
ggtctcacagctgaattggttgtagataaagctatggaactgagatacactggtggagtt
tatggtgggaacataaagcctacaccattcttgtgcctgactctgaagatgctacagatt
cagcctgaaaaagacatcattgttgaatttataaagaatgaagacttcaaatatgtgaga
ttactaggtgcattatatatgagactgactgggactgccatagactgctacaaatacctt
gaacctttatacaatgattatcgaaaaataaaaagccaaaatagaaatggggagtttgag
ctcatgcatgtcgatgagtttattgatcaattgcttcatgatgagcgtgtctgtgatatc
attttacctagactacagaaaagatatgttctagaagaagctgaacaactggaaacacgg
atcagtgctttggaagaagatatggatgatgtagaatctagtgaggatgaggaagaggag
gatgaaaagctggatagagccccttcccctgatcacagaagaagaggatatagggattta
gacaaacctcgtagatctccaacactgcgctacagaagaagtcgaagtagatctcctaga
aggcgaagccgatctccaaagaggagaagtccttcaccacggcgcgagagacatcgcagt
aagagcccaaggaggcaccgaagtagatctagagaaagacgccacagatcaagatctaaa
tctccagggcaccatcgtagccacagacatcgtagtcattccaagtctccagaaagatct
aaaaaaagccataagaaaagtcgtcggggaaatgaataa
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