Pituophis catenifer annectens (San Diego gophersnake): 139315241
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Entry
139315241 CDS
T11059
Symbol
TRIP11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139315241 (TRIP11)
Membrane trafficking [BR:
pcae04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
139315241 (TRIP11)
Retrieval pathways
139315241 (TRIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
Motif
Other DBs
NCBI-GeneID:
139315241
NCBI-ProteinID:
XP_070797462
LinkDB
All DBs
Position
Unknown
AA seq
1926 aa
AA seq
DB search
MSSWLGGLGAGFGQSLVGQVGGSLSTLTGHISSFTKDMLLEGTEEVGGAAVDFPVSDNSL
RDVESLHSTLRSENDRLKKFCNDLEEKNEVAELQIKQKSIDYRNQLQQKEVEISHLKTRQ
NALQEQLQKMQSAAQSSQLKPVVSPSATTSASFVPVRHHSSDFHRDDMDFGDVIWSQQEI
NRQSSEISRLESEVEHWKQIAQFSKPQGENNTDQNEICKLQNIIKELKQKLSQEIDEHQH
ELSVLQDAHHQKLAEISRRHREELSEYEERIEELEDQLQKVGGNTEASSEIDLQHGSKSP
NLSNLQNKVESLSQQLSSAEEEKDILLKELEFVKKEKNQVKEEYESLKSERSKAQISIPE
KQTGVKVEEVPSFVEESLKAEVERLQQALLDAESEITKLKTLNQGEVNKEMGSLQPGNTM
KGQNLENQLQHMHELNESSAEKETLIAELEELDKQNQEATQHMIMLKEQLAKQNAEAAEV
ISQLKLDVKSGEKTISMLEAEKMEMSKEVENQKETLNQCSLALNDLHMTNQHQENKIKEL
KEQLKTSQHYSSKNEQEVIELKKNLTEREEECSLLKNELTKIHQKSDSYQDHSVTEREEE
ISDLKQQISKNKLINTDLEKSIMNLQTEKGRLHLACEELKQQLQIANSEKSKIGFEKDTM
LEALKLEKGQLERELNQSEKRLLEQAHKYEQTIGDLSNARNMDTTALQYEHERLVKLSQG
KDFEIANLKRNIEQMEMDHEETKELLTTSLAGQKQLTELIKEKEVFVENFKIRVFELEQQ
HEDYIENMKRIEALKQNLEEREKSLSAMKEETSHLKEENERLKEQQSRSPPLAEPKTLDI
ITELEAEITQVTILKNSLEEQVKLNKKTFEDQNLKMAQLQLSLQEYKKETEESKFQHEQM
NIVHKQVCMEKDEEIKSLQRTVEQMKTQLNNQRKVIQQDPPDLFQESKVQTLNGENGNEK
HDLSKVEIERLIKGIKEREREIKLLNEKNVSLSRQIDQLSKDEVGKLTQIIQEKNLEIQA
LHATVSSPSYKQDVLFLQQQLQTYAMEREQVLAVLSEKTRENSQLKTDYHKLVDIVAAKE
STMKKLQEENQKLSSEFENSSHDMSRETIKNLSRIIREKDIEIDALSQKCQTLLTVLQSS
NINSGSELQGVNSNQFEELLQERDTLKQQVKKMEEWKKQVMTTVQNMQHESGHLQEELQK
LQIQISVDSENNSQLQVEYSGLIQGYEQNEKKLKTFTQELAQVQQSIGNLNNTRDIILGK
LDMVTPPSLVTSVEGKPLEVPSNTSSQMFDSECKSVNEGLEFMKKTLQEKDLLIQTLQEN
NQRLSDSMAVSSEVERKCQQEFGLELKQLKEKSDILQMSLKEKDLLIKSKGDQLLSLREN
LSNKESENELLKQSVTNLKERTLILEMDVCKLKEENDRIAAKSQEKETEFRALQETNMQF
SIMLREKEFEHNSMKEKALTFEKMLKEREQGKTGELNQLLNEAKSMHEKAVAFQQERDQV
MLALKQKQMETSALQNEVQYLREKEQRLNQELDRLRNHLLEREDTSTREALAAEDRESKL
KKKVRDLEEKLQSSSTVAENVSHQASMQVESLQEQLNLVTAQRDETMLQLTLSQDQVKQY
AISLTNLQMVLEQFQREEKAMYSAELQKAQKQTAEWKKKAEQLQDKMVLLQERLDEANEA
LGSASRLTEQLDLKEEQIEEFKRQGAIKQEMLEDAQNKLMNLINSTEGKVDKVLMRNLFI
GHFHTPKNKRHEVLKLMGSILGINKDELEQLLTEDHKGVTQWVTGWFGGRAAESKSVPNT
PLRPSQQSIFNRSFSELFVKFLETESRPTLPPPKLSLDNMKPLGMTGSTTPSSNVAGSGT
SRRPDINPFLAPRSAAVPLISPANLGTSGSGHLLMKSISDALPTFTPMPVAPDASAGAVL
KDLLKQ
NT seq
5781 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtggcttgggggcctcggtgcgggtttcggccagtccctggtgggacaggtc
ggaggcagcttgtcgacactgaccgggcatatctccagcttcaccaaggatatgctgtta
gaagggacagaagaggtgggaggtgctgcagttgattttccggtatctgacaatagtctg
agagatgtagaaagcttacattccacactgagatcagagaacgacaggttgaaaaagttt
tgtaatgaccttgaagaaaagaacgaagtagcagagcttcagataaagcaaaaatctata
gattaccgtaatcagctacagcagaaagaggtggaaatcagccatcttaaaaccaggcag
aatgctttacaggagcaactacagaaaatgcagtcagctgctcagtcatcacagttaaaa
ccagttgtttctccatcagccactacatcagcttcttttgttcctgttagacatcattct
tctgattttcatagagatgatatggattttggagatgtgatctggtctcaacaagaaata
aacagacagtccagtgaaatttctaggctcgaatctgaagttgagcactggaagcagatt
gcacagttttctaagcctcaaggagaaaataatacagatcaaaatgaaatctgcaagctg
caaaatattatcaaggaactgaaacagaagttgagccaagaaatagatgagcaccagcat
gaactttcagtattgcaagatgcacaccatcagaaattagcagagataagccgacgtcat
agagaagaactaagtgaatatgaggaacgaatagaagaattggaggatcaattacagaaa
gttggtggaaatactgaagcatcttctgaaatagatctacaacatggatcaaaatcacca
aacttgagtaacttacaaaataaagtggaaagtttaagtcaacaattgtcttcagcagaa
gaagagaaagacattctcttgaaagaacttgaatttgtaaaaaaagagaaaaatcaagta
aaagaagaatacgaaagtctaaaatctgaacgcagtaaagcccaaatatctattcctgaa
aaacagactggtgtaaaagtagaggaagtccctagttttgtagaagaatcgttgaaggct
gaagtggaacgattgcaacaagcactacttgatgcagaaagtgaaataacaaaattgaaa
acattaaatcagggagaagttaacaaagaaatgggaagtttacaacctggtaatactatg
aaaggacagaacttggaaaatcagctacaacacatgcatgaattgaatgaaagcagtgct
gaaaaagaaactctaatagcggaattggaagaactggacaagcagaaccaagaagctacc
cagcatatgattatgttgaaggaacaactagccaaacaaaatgcagaagctgctgaagtt
atcagccaactaaaactggatgtaaaatctggggaaaaaacaatatctatgttggaggca
gagaaaatggaaatgagcaaagaggtggaaaatcagaaagaaacattgaatcaatgctca
cttgcccttaatgatttgcacatgactaaccaacaccaggaaaataaaataaaagagtta
aaagaacagcttaaaacatcccaacattatagctccaaaaatgaacaggaagttatagaa
ttaaagaaaaatctaactgaaagagaagaagaatgttctcttctcaaaaatgaactaacc
aagatacatcagaaatctgatagttatcaagatcattcagtcactgaaagagaagaagaa
atatcagacctgaagcaacaaatttctaaaaataaactaataaatacagatttagagaaa
tcaatcatgaatcttcaaacagaaaagggaagacttcatttagcatgtgaggaacttaaa
cagcagctgcaaatagctaatagtgagaagagtaaaattggttttgaaaaagatactatg
ctggaagctttgaaacttgagaagggacagttagaaagagaattaaaccagtctgaaaaa
cgattgttggagcaggctcataaatatgaacagaccattggggacttatcaaatgcacgt
aacatggataccactgcattacaatatgaacatgaacgattagtaaaactttctcaaggc
aaagactttgagatagcaaatctcaaaaggaacattgaacagatggaaatggatcatgaa
gaaactaaagagctgttaaccactagcttagctgggcaaaaacaactgacagagctcata
aaagagaaagaagtatttgttgaaaattttaaaatcagagtttttgagttagagcagcaa
catgaagattatattgagaatatgaaaagaattgaggcactgaagcagaatttagaggaa
agggagaaaagtctttcagctatgaaagaagagaccagtcatttgaaagaagagaatgag
cgattaaaagaacaacaaagtaggtcccctcctttggctgagcccaaaaccttggatatc
atcacagaacttgaagcagaaataacacaagtaactatacttaaaaatagtctggaagaa
caggtgaaattaaacaaaaagacatttgaggatcagaacttgaaaatggctcaactacag
ctatccctacaagaatacaaaaaggaaaccgaggaatccaaatttcagcatgaacaaatg
aacatagtacataagcaggtatgcatggagaaggatgaagaaatcaaaagcctacagaga
acagtagaacaaatgaagacacaattaaacaatcagaggaaggtaattcagcaagaccct
cctgatctttttcaggaatctaaagttcagacactcaatggtgaaaatgggaatgagaag
catgacctgtctaaagttgaaattgaaaggctgataaaaggcattaaggagagagaaaga
gaaatcaagcttctgaatgaaaagaatgtttcgctaagtagacagattgaccagttatct
aaagatgaagttggcaaacttacacagatcattcaagaaaaaaacttagaaatacaagca
ctgcatgcaaccgtttcctccccatcttacaagcaagatgttcttttccttcaacagcaa
ttacagacctatgccatggaaagggaacaagtgttagcagttcttagtgaaaaaactaga
gaaaacagtcagttaaaaacagactatcacaaattagtggatattgttgcagctaaggaa
tcaaccatgaaaaaattacaagaagaaaaccaaaaactctccagcgaatttgaaaatagc
agtcatgatatgtctcgagaaactataaagaacttatcccgtatcatccgagagaaagat
attgagattgatgctttaagtcagaaatgccaaactttattaactgtcctccagtcttcc
aatataaactcaggcagtgagttacaaggagttaatagtaatcagtttgaggaactttta
caggaacgtgacacgctgaaacagcaagtaaagaaaatggaagaatggaagaaacaagta
atgactactgttcaaaatatgcaacatgagtctggccatctccaagaagaactacaaaaa
cttcagatacaaatttcggttgatagtgaaaacaattcccagctgcaggtagagtacagt
ggcttaatacagggctatgaacaaaacgagaaaaagttaaaaacctttactcaagaatta
gcccaagttcagcagagcataggaaaccttaataatacccgggatataattcttggaaag
cttgacatggtaacaccaccatcattggtaacttctgttgagggaaaaccattagaagtt
cccagtaatacttcttctcagatgtttgacagtgagtgtaaatcagtaaatgagggacta
gaattcatgaagaaaacattgcaggaaaaggatttgctaatccagactttacaagaaaat
aatcagagactgtctgattctatggctgtatcgtcagaggtcgaaagaaagtgtcaacag
gaatttggcttggaattaaagcaattaaaggagaaatctgacattttacagatgtccctc
aaagaaaaagatctgctgataaaatcaaaaggtgaccagttgctttctctaagagaaaat
cttagtaataaagagagtgaaaacgagttgcttaagcaaagcgtcactaacctgaaagag
agaacactgatcttagaaatggatgtttgtaaattgaaggaagaaaatgacagaatagca
gcaaaaagccaggaaaaagaaacagaattccgagcactacaagagactaacatgcagttt
tcaataatgttaagggagaaggaatttgaacataattccatgaaggagaaagcgcttacg
tttgaaaagatgttgaaagaaagagaacagggaaagacaggagaattaaaccagctgtta
aatgaagccaagtcaatgcatgaaaaagctgttgcctttcagcaagagcgagaccaagtc
atgttggccctcaaacagaaacaaatggagactagcgcgctacagaatgaggtgcagtat
ttacgtgagaaggagcagcgactaaatcaagagctagacaggttacgcaatcatcttttg
gaaagggaagatacctccacacgtgaagctttagccgctgaggatcgggaatcaaagcta
aaaaagaaagtccgtgatttggaggaaaagcttcagtcttcatcaactgtagcggaaaat
gtcagccatcaggcaagcatgcaggtggaatctctgcaagaacaattgaaccttgttacc
gcacaaagagatgagactatgcttcagctaacactttcacaagaccaagttaaacagtat
gccatatccctcacaaacctgcagatggtgctagagcaatttcaacgggaagagaaagcc
atgtattcagctgagctacaaaaagcccaaaagcagactgcagaatggaagaagaaggca
gagcagctacaagacaaaatggttttgttacaagaaaggttggatgaagcaaatgaagct
ctaggttctgcatcaagattaacagagcaactagatctgaaagaagaacaaattgaagaa
tttaaaagacaaggtgcaatcaaacaagaaatgttggaggatgcacaaaataaattaatg
aacctcataaatagtactgaaggaaaagtagataaagtcttgatgagaaatctttttatt
gggcatttccatactccaaagaataagcgtcatgaggtactaaagctaatgggaagtatc
ctaggaataaataaggatgaactggagcagttactgactgaagatcacaaaggtgttaca
caatgggtgactggttggtttggtggaagagctgctgaatccaaaagtgtccccaacaca
cctctcagaccaagccaacaatcgattttcaacaggtctttctcagaactctttgtgaag
ttccttgaaacagaatcacgcccaactctccccccaccaaaactttctcttgataacatg
aagcctttaggaatgacaggaagtactactccttccagcaatgtggcaggctcaggaacc
agtcgaagaccagatataaatccattccttgcacctcgatcagcagcagtcccactcatc
tctccagctaatcttggaactagcggatctggacatctgcttatgaaatccatttcagat
gccttgcccaccttcaccccaatgccagtagcacctgatgctagtgcaggtgcagtctta
aaagacctattaaagcaatag
DBGET
integrated database retrieval system
