Pituophis catenifer annectens (San Diego gophersnake): 139315390
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Entry
139315390 CDS
T11059
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcae03041
]
139315390 (RBM39)
Spliceosome [BR:
pcae03041
]
Common components
Common spliceosomal components
General mRNP proteins
139315390 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
DUF2332
CDC45
Motif
Other DBs
NCBI-GeneID:
139315390
NCBI-ProteinID:
XP_070797729
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MADDIDIEAMLEAPFKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKDRKRSRE
RERKKSKSRERKRSRSKERRRSRSRSRERRFRGRYRSPYSGPKFNSAMRGKIGLPHSMKI
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDNDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFSAVADLQTRLSQQSEVLAAAASVQPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVVHIYVDKNSTQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPTRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagccccctttaagaaggatgagaac
aaattgagcagtgccaatggacatgaagagcgaagtaagaagaggaaaaaaagcaagagc
agaagtcgtagtcatgataggaagagaagccgaagcaaggaccgcaaacgaagccgtgaa
cgtgaaagaaagaaaagcaagagtcgagaaagaaagcgcagtagaagtaaagaacggaga
cgcagccgttcaagaagcagagaacgtcgattcagaggccgttacagaagcccctattct
ggtcccaagttcaatagtgccatgagaggaaaaattggcttgccacacagcatgaaaata
agcagacgtcgatctaggagcaaaagtcctttcagaaaagacaagagccctgtaagagag
cctattgataatcttactccagaggaacgggatgctcgaacagtattctgcatgcagctt
gcggcgagaattaggccaagagacctggaagaatttttctctactgtaggaaaggtccgt
gatgtacgcatgatatcagatagaaattcaagacgttcaaaaggaattgcttatgtagaa
ttcgttgatgtcagctcagttcctttggccattggattaactggacagcgagtgttggga
gtgccaattattgtacaagcatctcaggcagagaaaaacagagcagcagcaatggctaat
aacttacaaaagggaagtgcaggccccatgagactctatgtaggctcattacatttcaat
ataactgaagatatgcttcgtggaatcttcgaaccatttggccggattgaaagcattcag
ctaatgatggacagtgaaactgggaggtccaaaggatatggatttattactttttcagac
tcagaatgtgctaaaaaggccttggaacaattaaatggatttgaactggcaggtaggcca
atgaaagtaggacatgtgactgaacgtacagatgcatccagtgccagttcatttttggac
aatgatgaattggaaaggactggaattgatttgggaacaactggtcgtcttcagttgatg
gcaaggcttgctgagggtactggtttgcagattcctccagctgcccagcaagcactgcaa
atgagtggatcattagcatttagtgctgtagcagatttacagacaagactttctcagcaa
agtgaagtcttagctgcagctgcttctgtacaaccacttgcaacacaatgctttcagctg
tccaatatgtttaaccctcaaactgaagaagaagctggctgggatacagaaattaaagat
gatgtgattgaagaatgtaacaagcatggaggtgttgtccacatttatgtagacaaaaat
tcaactcagggcaatgtctatgtcaaatgcccttcaatagcagcagcaattgcagctgtc
aatgcattacatggaagatggtttgcaggtaaaatgatcacagcagcatatgttcctctt
ccgacataccataatcttttcccagattctatgactgcaacccagctcttggttccaact
cggcgatga
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