Pituophis catenifer annectens (San Diego gophersnake): 139315399
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Entry
139315399 CDS
T11059
Symbol
PAPOLA
Name
(RefSeq) poly(A) polymerase alpha isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139315399 (PAPOLA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139315399 (PAPOLA)
Enzymes [BR:
pcae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
139315399 (PAPOLA)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
139315399 (PAPOLA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Polbeta
Motif
Other DBs
NCBI-GeneID:
139315399
NCBI-ProteinID:
XP_070797752
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MPFPVTTQGSQQTQQPQKHYGITSPISLASPKENDCILTQKLIETLKPFGVFEEEEELQR
RILILGKLNNLVKEWIREISEIKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
PRHVDRSDFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI
LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW
DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK
LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS
FPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTFDIQSFTDTVYRQAINSKMFEMD
MKIAAMHVRKKQLHQLLPSHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDNSTSVPSPTS
AMKTSPLNSSGSSQGRSSPAPAVTAASVTNIQASEVTVPQINSSESSGGTSSESIPQTAT
QPAISPPPKPTISRVVSSTRVVNQPQRPSGNTATKVTNPVAGVKRTSSPHKEESPKKIKT
DEDEINEDVSCIDMSDHDKMETKELFDTESDMASQQETLQTTVSLQAPQKMPSTDLSDIP
ALPANPIPVIKNSIKLRLNR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttccagttacaacccagggatcacaacaaacacaacagccgcagaaacattat
ggcattacctcaccaatcagtttagcttcccctaaggagaatgactgtatacttacccag
aagctaattgaaaccctaaaaccctttggtgtctttgaagaggaggaagaactgcaacgc
agaattctaattttgggaaagttaaataacttagtaaaggaatggatacgagaaatcagt
gaaattaagaatcttccacaatctgtaatagaaaacgttggtgggaaaatttttacattt
ggctcatatcgattaggcgtgcacacaaaaggtgcagatattgatgcattatgtgtggcg
ccgagacatgttgacaggagtgattttttcacctcattttatgaaaaactgaaattacag
gaagaggtcaaagacttacgggctgttgaagaagcatttgttcctgttattaaattgtgt
tttgatggaatagagattgatatcttgtttgccaggttagcactgcaaactattcctgaa
gacctagaccttcgagatgatagtctacttaaaaatttagacattagatgcatacgaagt
cttaatggttgcagagtaactgatgaaattctccatctagtaccaaacattgacaatttc
aggttaacactgagagctatcaaactgtgggccaaacggcacaacatctattccaatata
ctaggtttccttggtggagtttcctgggctatgctagtagcaagaacttgccagctttat
ccaaatgcaatagcatcaactcttgtacataaatttttcttggtattttctaaatgggaa
tggccaaatccagtgctattgaaacagccagaagaatgcaatcttaatttgcctgtatgg
gacccaagggtaaatcccagtgataggtaccatcttatgcctataattacaccagcatat
ccccagcagaactctacctacaatgtgtctgtttctacacgtatggtcatggttgaagaa
tttaagcaaggtcttgctatcacagatgaaattttgctgagtaaggcagagtggtccaaa
ctttttgaagcgccaaacttctttcaaaaatacaagcattatattgtacttctagcaagt
gcaccaacagaaaaacaacgattagaatgggttggcttagtagagtcaaaaatccgtatc
ttggttggaagcttggagaagaatgaattcattacactggctcatgtaaatcctcagtca
ttcccagcacccaaagaaaatcctgacaaggaagagtttcgtacaatgtgggtgattgga
ttagtgtttaagaaaactgagaattctgaaaatctgagtgttgatcttacatttgacatt
cagtcttttactgatactgtttataggcaagcaataaacagcaagatgtttgaaatggat
atgaaaattgctgcaatgcatgttaggaaaaaacaacttcatcaattactacctagtcat
gtccttcagaaaaagaaaaagcattcaacagaaggagtcaggttgacggcgctgaatgac
agcagcctagacttatctatggatagtgataacagcacttctgtgccttctcctaccagt
gctatgaagacaagtcctttgaacagttctggaagctctcagggcagaagcagtcctgct
ccagctgtgacagcagcatctgtgaccaacatacaagcttctgaagtcactgtgccacaa
ataaattccagtgaaagctcagggggtacttcaagtgaaagcattcctcaaactgccaca
cagccagccatctctccaccaccaaagcctaccatctctagagtagtttcttcaacccgt
gttgtcaaccaaccacagagaccttcaggaaacactgcaactaaagtaactaaccctgta
gcaggtgtgaagaggacatcatctccccataaagaagaatctcctaaaaaaataaagact
gatgaggacgaaataaatgaagatgttagttgcattgatatgagtgatcatgataagatg
gaaactaaggaactttttgatacagaatcagatatggcctctcagcaggaaactcttcag
accacagtatctctacaagctcctcagaaaatgcccagtaccgatctttcagatatccct
gctctccctgcaaatcctattccagttatcaaaaattcaataaaactaagattgaatcgg
taa
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