Pituophis catenifer annectens (San Diego gophersnake): 139315400
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Entry
139315400 CDS
T11059
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03250
Viral life cycle - HIV-1
pcae04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139315400 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
139315400 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcae03400
]
139315400 (SAMHD1)
DNA repair and recombination proteins [BR:
pcae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
139315400 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
PDEase_I
Npa1
HD_assoc_2
Integrase_2
Motif
Other DBs
NCBI-GeneID:
139315400
NCBI-ProteinID:
XP_070797748
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MSNGSREGALKRARPTSSPDGFQTPQKRGVTAADLAGSVSLHPRSWDTEQLCAFLQTQGL
EAAELQCFREHKITGSTVPYLTESHLEKMGICAVGVKQKLLICVRKLAQSQSYTEITKVF
NDPIHGHIEMHPLLVRIIDTPQFQRLRYIKQLGGTYYVFPGASHNRFEHSLGVSHLAGRL
VQALQERQPELNIDQRDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPGLKWKHEQASV
QMFEHLIDSNNLKPDMEQYGLQLDEDIHFIKEQIASPVEEERGDKEWPYHGRSKNKSFLY
EIVANKTSGIDVDKWDYFARDCHHLGIQNNFDYERFIKFARVCQVKDMMHICTRDKEVGN
LYDMFHTRNCLHRRAYQHKVNNIIETMITDAFLKADPHIKIKGSGGKVFQISTALEDMQA
YTKLTDEIFLKILHSDEPELSDAREILCKIQQRDLFKCLGETQPPEGKEIKKEDYDGLCA
EIVNSKPKTISEDVELKAEDFIVHVIDMDYGMKKRNPINSVRFYCKTDITQAVKITREQV
SKLLPEKFAEQLIRVYCKKKDAKIIEAATKYFIQWCMDKDFTKPRDGDVVAPELTPMKKG
WNKDDENQDSNRNSSGLKCKVNLNF
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacggtagccgggaaggcgcccttaaacgggcccggcccaccagctcgcccgat
ggcttccagacgcctcaaaagcgcggcgttaccgctgcggatttggcgggttccgttagc
ctccatcctcggtcctgggatacggagcagctgtgcgccttccttcagactcagggcttg
gaagctgcggagctgcaatgctttcgagaacataaaataactggttcaactgtaccatat
ctcactgaatctcatcttgaaaaaatgggaatttgtgctgtaggagtgaaacagaagctg
ctaatctgtgtgcgcaaactggcacaaagtcaaagttacactgaaataacaaaggtattt
aatgatccaatccatggtcatattgaaatgcatcctcttcttgttcgcatcattgacaca
cctcaatttcagcgtctacgatatattaaacagttgggtggcacttactatgttttccca
ggagcatcacacaatcgctttgaacattctcttggcgttagtcatctcgcaggccgtttg
gtgcaggcattgcaagaacgacaacctgaattgaatattgatcagagggatattctctgt
gttcagattgctggactttgtcatgacttgggccatggaccattttcacatatgtttgat
ggaagattcattccacttgctcgcccaggattgaaatggaagcatgagcaggcttccgtt
cagatgtttgaacacttaattgattccaataacttaaaaccagacatggaacagtatggt
ctccagcttgatgaagacatacattttatcaaagaacagatagcaagtcctgttgaggag
gaaaggggggacaaagagtggccttatcatggtcgttccaaaaacaagagttttctttat
gaaatagtggctaacaaaacaagtggcattgatgttgataaatgggactactttgccagg
gattgtcatcatcttggaattcaaaacaattttgactatgagcgcttcattaaatttgct
cgggtgtgccaagtgaaagatatgatgcatatttgtacccgtgacaaggaggttggaaat
ttatatgacatgttccacacacgaaactgtctgcaccgcagagcatatcagcataaagtt
aacaacattattgaaaccatgattactgatgcctttttaaaggctgatccacatatcaaa
ataaagggctcaggtggaaaagtgttccagatctctacagcactggaagacatgcaagcc
tacaccaagctgacagatgaaatatttttgaagattctacattctgatgaaccagagctg
agtgatgcacgcgaaattctgtgtaaaatacagcagcgcgatctctttaaatgcttggga
gaaacgcagccaccagagggcaaggaaattaaaaaggaagattatgatggattgtgtgct
gaaattgttaattccaaacctaagacaatctctgaagatgtggagctgaaggctgaagat
tttattgttcatgttattgatatggattatggaatgaaaaaaaggaaccccattaacagt
gttcgtttttactgcaagactgacatcactcaggcagttaaaattacaagagaacaagtt
tcaaagctgctcccagaaaagtttgcagagcagctcatcagagtttattgtaaaaaaaag
gatgcaaagataattgaggctgctacaaaatattttattcagtggtgtatggataaggat
ttcactaaaccacgggatggtgatgtggttgctccagaacttactccaatgaaaaaaggg
tggaataaggatgatgaaaatcaggattcaaacaggaacagtagtggtttaaagtgtaaa
gtaaatttaaatttttaa
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