Pituophis catenifer annectens (San Diego gophersnake): 139315430
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Entry
139315430 CDS
T11059
Symbol
SDC4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04512
ECM-receptor interaction
pcae04514
Cell adhesion molecule (CAM) interaction
pcae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139315430 (SDC4)
04514 Cell adhesion molecule (CAM) interaction
139315430 (SDC4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139315430 (SDC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pcae00535
]
139315430 (SDC4)
Proteoglycans [BR:
pcae00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
139315430 (SDC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
139315430
NCBI-ProteinID:
XP_070797810
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MQLARLAGLCAALLLAVSVEAESVRETEIMDPKLNIEEFASGDLPDDEDARSDLTIDYYE
DDEFSGSGDEQGYTDMEDKLVSATSSTMDSMDNSIPDSKKDAKDETEPAVIDNEIIVPKK
SSPEGEDLSNKVSMASTANGSIFERTEVLAALIAGGAVGLLFAVFLVLLLIYRMKKKDEG
SYDLGKKPIYKKAPTNEFYA
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcgctcgcctcgccggcctgtgcgccgctctcctactcgccgtcagcgtggaa
gcggagtcggtgagagaaactgagattatggatccaaaactgaacatagaggaatttgca
tctggtgacttgccagatgatgaggatgcaaggtcagacttaacaattgattattatgaa
gatgatgagttttcaggttcaggagatgaacaaggttatacagatatggaggataaattg
gtttctgccaccagtagcactatggattccatggacaactctattcctgactccaaaaaa
gatgccaaggatgaaactgaaccggctgtgatagacaatgagattattgttcccaaaaaa
tcatctcctgaaggagaagacctgtctaacaaggtctcaatggccagcacagccaatggg
agcatcttcgagagaacagaagtgcttgcagctcttattgcaggtggagcagttgggctc
ttgtttgctgtcttcctcgtcctgctcctaatctaccgcatgaagaagaaggatgagggc
agttatgaccttggcaagaagcccatctacaagaaagctcctacaaatgaattctatgcc
taa
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