Pituophis catenifer annectens (San Diego gophersnake): 139315638
Help
Entry
139315638 CDS
T11059
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pcae00535
]
139315638 (COL14A1)
Proteoglycans [BR:
pcae00535
]
Extracellular matrix (ECM) proteoglycans
Others
139315638 (COL14A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Fn3_VIN3
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Fn3_Dep-1_3rd
Fn3_R-PTP-O
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
139315638
NCBI-ProteinID:
XP_070798138
LinkDB
All DBs
Position
Unknown
AA seq
1873 aa
AA seq
DB search
MGRMDTHQSKTPSWFLLGFIAVSLQLSDPVLSQVAPPSRLRYTVIGPDSIQISWKGPKGR
FEGYKLLITPSSGGKTNELMLQNNANKAIIQGLIPDQSYIVQIVAFAQDQESKAAQGQFR
IKDLEKKKDTSGKPKPKEVGKLKPAVPTEDTELMPLPKPEENQFKCKIPAFADIVILIDG
SWSIGRFNFRLVRLFLENLVIAFNVDSEKTRIGLAQYSGDPRIEWHLNSHNTKEAVLEAV
RNLPYKGGNTLTGLALTFILENNFKPDAGSRPGVPKIGILITDGKSQDDVIPPAKNLRDA
GVELFAIGVKNADENELKEIASEPHSTHVYNVADFSLMNSIVEELTKTVCMRVEEQEKEI
KGSLVATLGAPTDLVTSEVTARGFHVSWTHAPGKVEKYRVVYYPTKGGQPEEVVVDGTVS
TAVLKNLMSLTEYQIAVFAIYVSSASEGLRGTETTLALPMASDLELYDVSHNNMKVKWKA
VAGATGYMILYAPLIDGLAAEEKEMKIGVTSTHVELEGLLPNTDYTVTVYAMFGEEASDP
LTGQETTLPLSPPRNLKFSNVDHSSAKITWDPASPQVKGYRIMYVKTDGTETNEEEVDQV
SAHILKSLTSLTEYTVAVFSLYSEGQSEPLTGSFSTKKVPSPEFLEIIEVSTETLTVSWK
PPSSDVALYRLAWIPLAGEEADEIILSGDVDTYEIEGLLPDMEYEVSLVALFDDESESDV
VAVLGSTLEILTTEVTTITTEITTTPEPTTAVFRTGIKNLMVEDETTSSLKVKWDITDLS
VSQFRVTYMKADGGHGEETVTVPARQNNLLLQPLLSDTEYKIMVTPIYADGEGVSLSAPG
KTLPLSPPQNLKVSDEWYNRLRISWDAPRSPTMGYRIVYKPVNISGPALETFVGDDVNTI
LILNLLSGTEYNVKVFASYTTGFSEALTGVAKTLYLGVTNLGAYQTRMTSLCAQWQPHRH
ATAYRIVIESLNDGAIEEEPLGWGASRHCFFQLFPDTKYNISVYSQIQELEGPAISIIEA
TLPYPTEPPPTPPTTTPQPTIPPAKEVCKAAKADLVFLVDGSWSIGDANFNKIIGFLYST
VGALDKIGPDGTQVAIAQFSDDTRTEFKLNAYRSKETLLDAIQHIAYKGGNTKTGRAIKH
AQQILFTLESGTRKGIPKVLVVITDGRSQDDVNQVSREMQLDGFSIFAIGVADADYAELV
NIGSKPSDRHVFFVDDFDAFKKIEDELITFVCETASATCPLVYKEGNSLAGFKMMEMFGL
VEKEFAAVEGVSMEPGTFNAYHCYGLHQDALVSQPTKYLHPEGLPSDYTITFLFRILPET
PLEPFALWEILNESYEPLVGVILDNDGKTLTFFNYDYKGEFQTVTFEGPDIKKIFYGSFH
KLHIVISKTTAKVVIDCKEVGEKIINAAGNITSNGIEVLGRMVRSRGPRDSSAPFQLQMF
DIVCSTSWANRDKCCELPALRDEEGCPALPHSCSCSEVNKGSPGPQGPPGGPGLRGPKGS
RGDDGPKGPDGPRGEIGTPGPQGPPGPQGPSGLSIEGPPGPSGEKGERGEIGRPGLQGIP
GPTGSPGRDGSQGPRGLIGKDGPTGPQGSSGPVGIPGAPGVPGIMGNIGPQGDAGPPGLP
GVKGEKGERGDLQSQAMVRAVARQVCEQLIQSHLDRYNSILNQIPSNSISTRTIPGPPGE
PGRQGLPGPQGEQGSSGSPGFPGNPGQPGTPGERGSPGEKGERGNPGIGTQGPRGPPGPA
GPPGESRTGTPGPSGSPGPRGTAGRTGPPGAQGTPGQPGYCDPSSCAGYGAGGGYGDPTD
QDVPVVPLTHNSYQLYDSEDLYEDQPEPYLGSYAYPHVAQPEFTPVDEEMEAAGISRFPR
RISKRSISSPKRN
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaatggacacccatcaatcaaagaccccgagctggttcctcttaggtttcata
gctgtgtctcttcaactgagtgatcctgttttaagtcaagtggctccaccatcaagatta
agatatactgttattggtcctgacagtattcagatttcatggaaaggccccaaagggagg
tttgaaggatataaacttctcatcactcctagttcaggagggaagacaaatgagctgatg
cttcagaacaatgcaaacaaggcgattatccaaggtcttatccccgatcagagttacatc
gttcagatagtggcctttgctcaagatcaggagagcaaagcagcgcaaggccagttccga
attaaagatctagagaaaaagaaggacacttcaggcaaacccaaaccgaaagaggtgggc
aaactgaagcctgctgtgccaacagaggatacagaattgatgccccttccaaaaccagaa
gaaaaccaatttaagtgcaaaattccagccttcgcagacatcgttatcttgattgatggg
tcctggagtattggcagattcaacttcaggcttgtgcgtcttttcttggaaaatctggtt
atcgccttcaacgtggattctgaaaaaacaagaataggcctggcacaatacagtggtgat
cccaggatagaatggcatctgaattcccacaacacaaaggaggctgtcttagaagcagtg
cgaaacctcccctacaagggtggaaataccttaaccggtcttgccttaacttttattttg
gaaaacaactttaagccagatgcaggttcaaggcctggagtccccaaaattggcatattg
atcactgatgggaaatcccaagatgatgtcattccacctgcaaaaaacctgagagatgct
ggggtcgaactctttgccataggtgtaaagaatgctgatgaaaatgaactgaaggagatt
gcttcagaaccacacagcactcacgtctacaatgttgctgacttcagtttaatgaactcc
attgtggaagaacttacaaagactgtgtgcatgagagttgaagaacaagagaaagaaatc
aaaggatcattggttgccacacttggagcccctacagatttggtcacatctgaagtgaca
gccagaggattccatgtgagttggactcatgcaccaggcaaagtggaaaagtaccgagtt
gtctattatcccaccaaaggaggacaaccagaagaggtggtggtagatgggacagtttca
acagctgtactgaaaaatttgatgtctttaactgagtatcagattgctgtgtttgccatc
tatgttagttctgccagtgaaggtctccggggtactgagacaacacttgcattgccaatg
gcatctgatttggagttgtatgatgtctcacacaacaatatgaaagtaaagtggaaggca
gtagccggtgcaactggctatatgattctgtatgcacccctcattgatggtttagcagca
gaggaaaaggagatgaaaattggagtgacctccacacatgttgaacttgagggtctgcta
cccaacacagattatacggtcactgtttatgcaatgtttggagaagaagccagtgatcct
cttacaggacaagaaacaacattgcctttaagtccgccaagaaatttgaagttttcaaat
gtggatcacagctcagccaaaataacctgggatccagcttccccacaggtcaaaggctat
cgcattatgtacgttaagacagatgggactgaaaccaatgaggaagaagttgatcaagtg
tcagcacatattttgaagagcttgacgtctctcactgaatatactgtagccgttttctcc
ctctatagcgagggtcagtctgagccactcacgggcagctttagcacaaagaaagttcca
tcacctgaatttttggaaattattgaagtatctactgaaactttaacagtaagctggaag
ccaccatcctctgatgtggctctttaccgtctagcatggatcccattggctggcgaagaa
gctgatgagatcatcttaagtggagatgtggacacctatgagatcgaaggcttgctaccc
gatatggaatatgaggtgtccttggtggccctctttgatgatgaaagtgaaagtgatgtg
gttgctgtacttgggagcacacttgaaatactgactactgaagtaactaccattaccaca
gaaattactactactcctgagcctacaacagcagtctttcggacaggaataaaaaatctc
atggtcgaagatgaaactacctcaagtttgaaagtcaaatgggacattacggacctcagt
gtttcccagttcagggtgacatatatgaaggctgacggtggtcatggggaggaaacggtt
acagtccccgcgagacaaaacaatttacttcttcagcctttgctctcagacaccgaatac
aaaattatggtcaccccaatctatgctgatggagaaggagtcagtttgtcagctccggga
aaaactttgcctctttctcctccacaaaatctgaaagtctctgatgaatggtacaaccga
ttaaggattagctgggatgcacctcgatcccccacaatggggtataggattgtatataaa
cctgtgaatatttctggaccagcacttgaaacctttgtgggtgatgacgtcaacactatc
cttatcttgaatttgcttagtggaacagagtataatgttaaagtatttgcttcttacacg
actggatttagtgaagccttaacaggtgttgccaagacattgtatttgggtgtgacaaac
ttaggagcttatcaaacccgaatgacgagtttatgtgcccaatggcagccccacagacac
gcgactgcttacagaattgtaatagaatctcttaatgatggggcaatagaagaagaacct
ttaggttggggggcatctaggcattgcttctttcaactttttcctgacacaaaatataat
atcagtgtttattcacaaattcaggaattagaaggacctgccatcagtataatagaggca
acactgccatacccaactgagccaccaccaactcctccaaccaccactccacagcctacg
attcctccagcaaaggaagtttgcaaagctgcaaaggccgacctggtatttttagtggat
ggatcttggagtattggagatgcaaatttcaacaaaataattggctttctatatagcact
gttggtgctcttgacaagattggtcccgatggaactcaggtggcaattgcccagtttagt
gatgatacgaggacagaatttaaattgaatgcctacagaagcaaagaaactctactagat
gccattcagcatatagcctacaaagggggaaacaccaaaacaggcagagcaattaaacat
gcacaacagatcttatttactttggagtctgggaccaggaagggaatcccaaaagtttta
gtagtgatcacagatggacgatctcaagacgacgtgaaccaagtttccagagagatgcaa
ctagatggattcagtatatttgccattggagttgcagatgctgattacgcagaactggtt
aacattggcagcaagccgagcgacagacatgtgttctttgtggatgactttgatgccttc
aaaaagattgaagatgagctgatcacttttgtctgtgaaacagcctctgcaacttgtcca
ttggtgtataaagagggcaatagtttagcaggatttaaaatgatggagatgtttggcttg
gttgagaaagagtttgcagctgtggaaggagtatctatggaacctggaacgtttaatgcc
taccactgttatggactgcatcaggatgctttggtctctcagccaaccaaatatctacat
cccgagggtctcccatcagattacaccataacttttctcttccgcatccttcctgaaaca
cctctggaaccatttgctctgtgggagattttaaatgaaagttatgagccgttggttgga
gttattttggataatgatggcaaaaccttgactttcttcaattacgactacaaaggggaa
ttccagacggtaacctttgaagggcctgacataaagaaaatattttatgggagtttccat
aagctgcatattgttatcagcaaaaccactgctaaagtagtgattgattgcaaggaagtg
ggtgagaagattatcaacgcagcaggaaatatcacttctaacgggattgaagtcctggga
agaatggttcgatcaagaggaccaagagacagttctgcaccattccagctgcagatgttt
gatatcgtttgttccacttcatgggccaatagagataagtgctgtgaacttccagctttg
agagatgaagaaggctgccctgcccttccacattcttgttcctgttctgaagtcaacaaa
ggatctcctgggccccaaggaccacctggaggtccaggtctccgaggtccgaaaggaagc
cgtggtgacgatggcccaaagggacctgatggacctcggggtgaaattggtactccaggc
cctcaagggccccctggaccacaggggccaagtggactttcaatcgaaggacctccggga
ccaagcggagaaaaaggagaaaggggagaaattgggcgtccaggtcttcagggtattcca
ggaccaacggggtcaccaggacgagatggaagccaaggtccaaggggcctgataggcaaa
gacggaccaactggacctcaaggttcctcaggaccagtgggaatacctggtgctccaggt
gtcccaggaataatgggtaatattggcccacaaggagatgctggaccacctggacttcct
ggagtaaaaggcgagaaaggtgaacgtggagatcttcagtcccaagcaatggtacgggca
gtagctcgtcaggtgtgtgaacagcttattcagtctcacctggatagatacaactccatc
ttaaatcagattccgagcaactcaatctcaacacggactatcccaggtccccctggtgaa
ccaggacggcaaggcttacctggaccacagggagagcaaggatcttcaggaagcccaggt
ttccctggcaatcctggccaacctggaacaccaggagaaagaggctcaccaggagaaaag
ggagaacgaggtaacccaggtatcggaacccaaggcccccgaggtcctccagggccagca
ggacctccaggtgagagtcgaactggcactcctgggccttcaggatcacctggtcccaga
ggaacagccggtcgcacaggtcctcctggggcacagggaacacctggacagccagggtac
tgtgatccttcctcttgtgctggttacggagcaggtggtggctacggggatccaacagat
caagacgttccagttgtgccattaacccacaactcctaccaactgtatgattccgaggat
ctttatgaagatcagccagagccctatctaggatcctatgcttatcctcacgtagcacaa
ccagaattcacacccgtggatgaagaaatggaggctgccggaataagccgctttccgagg
agaatctccaaaagaagtatcagctctccaaaacgcaattga
DBGET
integrated database retrieval system
