Pituophis catenifer annectens (San Diego gophersnake): 139315823
Help
Entry
139315823 CDS
T11059
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139315823 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139315823 (SOX17)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139315823 (SOX17)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Sox17_18_mid
HTH_24
Motif
Other DBs
NCBI-GeneID:
139315823
NCBI-ProteinID:
XP_070798399
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MSSPDAGYASSDDQAQGRSSLPSVMMQCQWAESLSPLTDGKGKGEAAADQVQQGASGRAK
GETRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGQSWRALTQEEKRPFVEEAER
LRLQHMRDHPHYKYRPRRRKQVKRLKRNDGAVDGGSGFLPVQHHQLGLPGEAGNGGSCEG
LGLSYAEQPNYAGGSFHYRDCAPLPLSALGTHFGNYSLPTPEPETQGGACAEPVFFPPPH
PEEGGCLLGPYGYPTPPGSEYPCNGVPAGGHGNNGGSPNVGVSLFRSRFPVPLASYPSSP
APDHAQQQPQPPRRRAEASAGLEQLPPHDVDLLADVDRAEFEQYLPFACRPGDLGLPYAS
HEGPDANAAAYYCAAAGGAGTYPELTTRAKNQQKLG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgctggatacgccagtagcgacgaccaggcgcaaggacggtcctct
ctcccttccgtcatgatgcagtgtcagtgggcagaatcgctcagccccttaaccgatggc
aaaggcaaaggcgaagcggcagccgatcaagtacagcagggagcctcgggccgggccaaa
ggggagacccgcattcgccgccccatgaacgctttcatggtctgggccaaggacgaacgc
aagcggctggcgcagcagaatccggatctgcacaacgcggagcttagcaagatgctggga
cagtcgtggcgggcgctgacccaggaggagaagcgccccttcgtagaggaggcggagcgg
ctgcgactgcagcatatgcgggaccacccccactacaagtaccggccgaggcgcaggaag
caagtcaagcgccttaaacgcaacgacggcgcagtggacggtgggagcggcttccttcca
gttcagcatcaccagttgggcctgcccggagaggcgggaaatggaggcagctgcgaggga
ctcggcctttcttacgcagagcaaccgaattacgccggcgggagcttccattaccgggac
tgcgcgccgctcccactgtcggctttgggcacccatttcgggaactacagcctgcctact
ccagagcccgaaacccaggggggcgcctgcgcagaacctgtttttttcccgccaccccac
ccggaggaaggaggctgcctgctgggcccctacggctacccgacgccgcccgggtccgag
tatccgtgcaacggcgtccctgccggcggccacggcaacaacggcggtagccccaatgtc
ggcgtcagccttttccgtagtcgcttcccggtgcccttggcctcctacccttcctcgccc
gccccggaccacgcgcagcagcagccgcagccaccccgtcgccgagcggaggcctccgcg
gggctcgagcagctgcccccgcacgacgtggacttgctggcagatgtggaccgcgccgag
tttgagcagtacctgcccttcgcctgccgcccgggcgacctggggctcccctatgcgagc
cacgaaggcccggacgccaacgccgctgcctattactgcgcggccgcgggtggggccgga
acgtatcccgagttgactaccagagccaagaatcagcaaaaattgggatag
DBGET
integrated database retrieval system
