Pituophis catenifer annectens (San Diego gophersnake): 139315957
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Entry
139315957 CDS
T11059
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04137
Mitophagy - animal
pcae04140
Autophagy - animal
pcae04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139315957 (HIF1A)
04137 Mitophagy - animal
139315957 (HIF1A)
04148 Efferocytosis
139315957 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139315957 (HIF1A)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
139315957 (HIF1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
139315957
NCBI-ProteinID:
XP_070798579
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MEPCPTTDGSCEKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHHVSAHLDKA
SVMRLTISYLRMRKLLDADDLEAEAEMETQLNCFYLKALDGFVMVLSEDGDMIYTSENVN
KCMGLTQFELTGHSVFDFTHPCDHEELREMLIHRNGSVKKGKDQNTERSFFLRMKCTLTS
RGRTVNIKSATWKVLHCTGHIRVYENCNNQTVCGCKKPPMTCLVLICEPIPHPSNIEVPL
DSKTFLSRHSLDMKFSYCDERITELIGYDPEELLGHSIYEYYHALDSDHLTKTHHDMFAK
GQVTTGQYRMLARQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQGDLVFSLQQT
ERMLKPVDSPEMGMMKVLNKSDLEDSSSLFEKLKKEPDALAYLAPAAGDTIIALDFDNDE
PDEQQPSDDVPLYNDVMLPSSSEKLQNINLAMSPLSASETTKPLCSSADPALNREAVAKL
EPSTEPLDLTFSSRRTQDQPATPSDGSTSQSSPEPNSPPNDYCFSVDNEISSEFKLELVE
KLFAIDPESKNPFSMQETDLDLEMLAPYIPMDDDFQLRTFDQLSPLEGNTANSSSDATPV
TVFQQTPVQSSATDTIKSTTIKHETAPKMLVTPAPINPKVLTDPAPIISAPASPYAKTQS
RTSSPVRTGKGTIDQTDQMSPGAPDLLTVTFGNRSTEVNEDISPRIIALHNIQRKRKMEQ
DGLLFQAVGIGTLLAQSGPPGTNISLAWKRVKGCRSNGQNEVAEKTVILLPSDIASKLLG
QSMDEKGLPQLTSYDCEVNAPIQGNRNLLQGEELFRALDQIN
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggagccttgcccgacgacggatggctcctgcgagaagaaaaggattagctcggaacgt
agaaaagagaagtctagagatgcagccaggtgtcggaggagtaaagaatcagaagtgttc
tatgaacttgctcaccagttgcctcttccccatcacgtgagcgcacatcttgataaagcc
tctgttatgagacttacaatcagctacctccgtatgagaaagctgcttgatgcagatgac
ttagaggcagaagctgaaatggagacacagttgaattgtttttacttaaaagctctggat
gggtttgttatggtcctctctgaagatggtgacatgatctatacttctgaaaatgtgaac
aagtgtatgggactcactcagtttgaattgacaggacacagcgtgtttgatttcactcat
ccatgtgatcatgaagagttaagagaaatgctcatccatcgaaatggatccgttaaaaag
ggaaaggatcaaaatacagaacggagttttttcctcagaatgaaatgtacactgaccagc
agaggaagaactgtgaatataaaatcagccacatggaaggtacttcactgtacaggtcat
atccgcgtttatgagaattgcaacaatcagactgtgtgcggttgtaaaaagcctcccatg
acgtgtttggtattaatttgtgagcctatacctcatccatcaaatattgaagtcccattg
gatagtaaaacgttcctcagccgccatagccttgacatgaaattttcctattgtgatgaa
aggattacagaactaatagggtatgatcctgaagaactcctggggcattctatatatgaa
tattatcatgcactggattctgatcatctgaccaaaacacatcatgacatgtttgccaaa
gggcaagtcaccaccggacagtatcgaatgcttgccaggcaagggggctatgtctgggta
gagactcaagcaactgtcatatacaatactaaaaattctcaaccacaatgtatagtgtgt
gtgaactatgtcttgagtggaattgttcagggggacttggttttttcacttcagcaaaca
gagcgtatgttgaaaccagtggattctcctgagatgggaatgatgaaagtactcaacaag
agtgatctggaagatagcagcagcctctttgagaaacttaagaaggaacctgatgcatta
gcctatcttgctcctgctgctggagataccataattgcattagattttgacaacgatgag
ccagatgaacaacaaccgtctgatgacgttcctttgtataatgacgtaatgctcccctca
tccagtgagaaactgcagaatataaatttggcaatgtccccactatctgcttctgaaaca
acaaaacctctctgtagcagtgctgatccagcactcaatagagaggcggtggccaaactg
gagcccagcacggagcccttagatcttactttctccagccggaggacccaagatcaacca
gctactccttctgatggaagcactagccaaagctcacctgagcctaatagtcctcctaat
gattattgcttcagtgtggataatgagatatcaagtgagttcaagctggaattggtggaa
aagctctttgcaatagacccagaatcgaaaaatccattttcaatgcaggaaacagattta
gatttggaaatgttggcaccttatatccccatggacgatgatttccagttgcgcactttc
gaccagctttcaccactggagggcaatactgcaaattcttcttctgatgcgactcctgtg
acagtttttcagcaaactccggtgcagtcatctgccactgacacgataaaatccacgaca
atcaaacatgaaactgctccgaagatgcttgtaacgcctgcccctattaacccaaaagta
ctcacagatcctgctcccataatcagtgccccagcatcaccttatgctaaaacccaaagt
cggacttcgtctccagtcagaacaggaaaaggcacaatagaccagacagaccaaatgagt
ccaggagcacccgacttgttgacggtcacttttggtaacagatcaactgaagtgaatgaa
gacatcagtccaaggataatagctctccataatattcagaggaaacgaaaaatggagcag
gacggcttgcttttccaggcagtaggaattggcacactattggcacaatcggggcctcct
ggaacaaatatatcactggcttggaaacgtgtaaaaggatgcagatcaaacggacagaat
gaggtggcggagaagactgtaattttattaccatcagatatagcaagtaaacttctaggg
cagtcaatggatgagaagggacttccacagcttaccagctatgattgtgaagtcaatgct
cctatacaaggcaaccgaaacttgttacaaggtgaagagttgttcagagccctggatcag
atcaactga
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