Pituophis catenifer annectens (San Diego gophersnake): 139316030
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Entry
139316030 CDS
T11059
Symbol
CDH12
Name
(RefSeq) cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
139316030 (CDH12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139316030 (CDH12)
Cell adhesion molecules [BR:
pcae04515
]
Cadherins
Major cadherins
139316030 (CDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
Cadherin_2
Stevor
ASFV_J13L
7TM_GPCR_Srw
DUF443
YxzE
DUF6001
RIFIN
VirB3
Motif
Other DBs
NCBI-GeneID:
139316030
NCBI-ProteinID:
XP_070798679
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MLTRNCLSLLLWVLFNGGILMLLHSQPQQISKAESRRNVVTNPERRIPTLRVKRGWVWNQ
FFVLEEYMGSEPQYVGKLHSDLDKGVGSVKYTLSGDGAGTVFTIDETTGDIHAIKSLDRE
EKPFYTLRAQAVDIDTRKPLEPESEFIIKVQDINDNEPKFLDGPYIASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPESSLVGSAVGRIRAVDPDFGK
NAEIEYTIVPGDGGNLFDISTDENTQEGIIKLKKPLDFETKKAYTFKVEASNVHLDHRFH
SVGPFKDTATVKINVLDVDEPPVFSKPFYTMEVYEDTPVGTIIGAVTAQDLDIGSSAVRY
FIDWKNDMDSYFTIDGMEGTIATNELLDRENTAQYNFSIIASKVSNPLLTSKVNVIINVL
DVNEFPPEITVPYESYVCENARLGQVIQVIGAADKDLSPAGQKFSFRLSPEVTTKPNFTV
HDFTNNTAGIVAGRSGYSRRQQEFYLLLIVIEDSSYPKQSSTNTMTIRVCRCDSDGSVLS
CNAEAIFLPVGLSTGALIAILLCIIILLVIVVLYVALRRQKKKDTLMTSKEDVRDNVIHY
DDEGGGEEDTQAFDIGALRNPKGIEDNKIRRDIKPDALRLPRSKPPTEDNTNIRDFINQR
LRENDGDPLAPPYDSLATYAYEGNGSVAESLSSIDSVATEADQDYDYLSDWGPRFKVLAE
MFGEEESYNPDKVT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactgcttatccctgcttctctgggtcctgttcaatggaggtatctta
atgttacttcattcgcaaccacaacagatttcaaaagctgagtcaaggagaaatgttgtc
accaaccctgaaaggaggatacccaccttacgggtcaagagaggctgggtctggaatcag
ttttttgtcctggaagaatacatgggctccgaaccccagtacgtgggaaagcttcattct
gacttggacaagggagtgggaagtgttaagtatacattatcaggagatggagctggtaca
gtatttaccattgatgaaactacaggggacattcatgccataaagagccttgatcgtgaa
gagaagcctttctacaccctacgtgctcaagcagtagatattgacacaaggaagccattg
gagcctgaatcagagttcatcatcaaagtgcaggacattaatgataatgaaccaaaattc
cttgatgggccttacattgccagtgtccctgaaatgtcaccagtaggggcatatgtgctg
caggtcaaagcaaccgatgctgatgacccaacctatggaaacagtgccagagtggtttat
agcattcttcagggacagccatatttctccattgatcccaaaacaggtgttataagaaca
gccttgccaaacatggacagagaagttaaggaacaatatcaagttctcattcaagcaaaa
gacatgggaggtcaactcgggggactggctggaaccacaacagtgaatatcactctgact
gatgtcaatgacaacccaccaagatttcccaagagtatcttccacctaaaagtaccagag
tcatctcttgttggttcagctgttggaagaatcagagcagtggatcctgactttgggaaa
aatgctgaaattgaatataccatagttccaggagatggggggaacttatttgacattagc
acagatgagaacacacaagaaggaatcatcaaactgaaaaagccactggattttgaaaca
aaaaaggcatacactttcaaagtagaggcttcgaatgtccatcttgaccatcgctttcat
tctgtgggtccattcaaggatacagcaactgtgaagatcaatgtcctggatgtggatgag
cctccagttttcagcaaaccgttttacaccatggaagtatatgaagatactccagttggg
accattataggagcagttactgcccaggacttggacattggaagcagtgctgtcaggtac
ttcatagactggaagaatgatatggatagctactttactatagatggaatggaaggaact
attgccacaaatgagttacttgatagagagaatactgcgcaatacaatttttcaataatt
gcaagtaaagttagcaatccactcttgaccagcaaagttaatgtcatcataaatgtcttg
gatgtcaatgaatttcctccagaaattacagtaccctatgaatcttatgtgtgtgaaaat
gcacgactgggacaggtaattcaggttattggtgcagcagacaaggatttgtctcctgct
gggcaaaaattctcttttcgactgtctcctgaagttactacaaagccaaatttcacagtc
cacgatttcacaaacaacacagcaggaattgtagctggcagaagtggttacagccgtcga
cagcaagagttctatctccttctaattgtcattgaagatagtagctaccccaaacaaagc
agtacaaacacaatgacaatccgagtttgcagatgtgactctgatggctccgtcctctca
tgtaatgctgaagcaatattcttgcctgttggactcagcacgggagcattgattgcaatc
ctgttgtgtattattatactcctagttattgtggttctttatgtggccttgagacggcag
aagaaaaaagacaccctaatgacctccaaggaagatgttcgagacaatgtcattcattat
gatgatgaaggagggggtgaagaagacactcaggcctttgacattggggctttaaggaat
cccaaaggaatcgaagataacaaaatacgcagggatattaagccagatgctctccgcttg
cctcgctcaaaaccacccacagaggacaacacaaatattagagatttcataaatcaaagg
ctgagagaaaatgatggagatccattagctcccccttatgattcactagcaacttatgct
tacgaaggaaatggatctgtagctgaatctctcagctctatagattctgttgcaacagaa
gcagatcaggattatgactatttgagtgactggggaccacgctttaaagtcttagcagag
atgtttggagaagaagaaagttataatccagataaagtcacttag
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