Pituophis catenifer annectens (San Diego gophersnake): 139316322
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Entry
139316322 CDS
T11059
Symbol
RSF1
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139316322 (RSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcae03036
]
139316322 (RSF1)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
139316322 (RSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
Motif
Other DBs
NCBI-GeneID:
139316322
NCBI-ProteinID:
XP_070799082
LinkDB
All DBs
Position
Unknown
AA seq
1417 aa
AA seq
DB search
MAAATAAAAAPPSPPCPAAPPPEGFSRPGSWPNFAVVCSFLERYGALLDLPELPFPELER
VLQPPQEPGDQVPRELVELHLKLMRKIGKSVTADRWEKYLIRMCQDFNSTWAWEMEKKGY
LEMSTECKLGILKYLCECQFDDNLKFKNIINEEDADGMRLQPLGRDKDGLTYWYQLDQEH
NVRMYVEEQDDQDGTSWKCIVRSRNELAETLELLKAQIDPALLKNQDNSLQETPSTEDEE
AKKREGTAMQEGELKVKEEKKEPAEGLPQPCEKLPPPAIPAEEKKIKVEKVEERDIIKLP
VIVKLEKPPENHGEVQTTKDENDSFKENVKPAKAEAKEKKPEQKDSREVNSNTERTVLEP
ERIEFCVSVKTPQDVVERTAEENEKLKNDQQAKIPLKKREIKLTDDFDSPLKAPLRKCIT
PTKDVSKEEGGKPEEETFKRVPTITDGKFLVNGEMGCEKLVTNNRLDRSPCPKEEAAVLP
KEKNGLVEERVQEGISTIVRTSDVERCILHPAKETVGVIVPLREETSPKGSEKQPDAKKS
DGVAETISKAGDPPKKLEESLRIKDSVILSKDSLEKPTKLPSPKESVLVSSADDLKKKGP
SDEKRASAGPDATPSSVSVLSFKKPATDKEDSDSQTAFPDQRQACKEKEAETPKDSESQE
GELPTTDTLPSSVKEPPPETKKESVKTKCKYKLISEEESSLTENRELTSERQKDGIKLTI
RISSRKKTDSLPAKSLNAATGKEEGEVVSVGRILRRSPRISKPTPKVVETRDQKSEKKRS
EEEDEKVASVQKQEKKEDSKKQEKETNSKTHKVSRRNKVRWAGTRTRGRWRYSSNDDSEG
SERQGDSEEEEEEEEEEEEEEEPAPADDDEPCKKCGLPNHPELILLCDSCDSGYHTACLR
PPLMIIPDGEWFCPPCQHKLLCEKLEEQLQDLDVVLKKKERAERRKERLVYVGISIENII
PPREPEIPEPVDEKKKESKKSKAKLLERRSTRQRKCISYRFDEFDEAIDEAIEDDIKEAD
GGGVGRGKDMSNITGHRGKDISTILEEERKESKRPPRAAALRRKKRRRLNDLDSDSNLDE
EESEDEFRISEGSQDEFVISDENLDESEEDQPSNDDSDVGFSKRRPRRHHPRPMRQSRRL
QRKTIKKRYSEDDEDEDSEDNLSGDSETDASSEYSDEDYLETRRRRSRRNQKRQVNYKED
SESEGSQKSFRYGKEMRRIHKRRLSSSDSEESYLDKHSEDDQPARLSKRSARKRSHTTDE
YSEGEDDPEEEGRPVRKRVNRIETDEEDNGPDAGKPSLPAEKPLASPAPQDSVKKPSYRI
ESDEEDDFDNVSKVESPLDYSLVDLPSTNGQSPGKAIENLIGKPTEKAPSTKDSTANATL
APNGTGGGLEAGGPEEDEDELLRVTDLVDYVCNSEQL
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgacggcggcggcggcggctcccccttccccgccttgccccgccgccccg
ccgccggagggtttttcccgcccgggctcttggcctaacttcgccgtcgtctgctccttc
ttggagaggtacggcgctctcctcgacctgcccgagctgcccttcccggagctggagcgc
gttttgcaaccgccgcaggagcccggcgaccaggttccaagagaattggtcgaacttcat
ctgaaactgatgaggaagattgggaaatctgtcaccgcagaccgatgggaaaaatacttg
atcaggatgtgtcaagacttcaacagcacctgggcgtgggagatggagaagaaaggatac
ctcgaaatgagcaccgaatgcaaattgggaattttgaagtacctttgcgaatgccagttt
gatgacaatctaaagtttaagaatatcatcaacgaggaagatgccgacggcatgcgtctg
cagccccttggccgagacaaggatggtttgacctactggtatcagctggaccaagagcat
aatgtcagaatgtacgtagaagagcaggacgatcaagacgggacttcgtggaagtgcatc
gtcagaagccgaaatgagctggctgaaactcttgagctcctgaaagcacaaattgatcct
gcactgttgaaaaaccaggataactctttgcaagagactcctagcactgaagatgaagag
gccaaaaagagggaaggcacggcaatgcaagaaggcgaattgaaggtgaaggaagaaaaa
aaggagccagcagagggactgccacagccctgcgaaaaacttccacctcctgccattccg
gccgaggaaaagaagatcaaagtagagaaagtggaagagagagacatcatcaagctcccc
gttatcgtaaaacttgaaaagcctccggagaaccacggggaagtgcaaactaccaaagac
gaaaacgactctttcaaagaaaacgtgaagccagctaaagcggaagcgaaggagaagaag
ccggagcagaaagactccagagaggtgaacagcaacacggagagaacggtcctcgaaccc
gagaggatcgagttctgcgtcagcgtcaaaaccccccaagatgtggtggagagaacagca
gaagagaacgagaaacttaagaacgaccagcaggccaagatccccctgaaaaaacgagag
atcaagctgactgatgatttcgacagccccttgaaagcgcccttgcggaaatgtatcaca
ccaaccaaagacgtttcgaaagaggaagggggcaaacccgaggaggagacctttaagagg
gtccccaccatcaccgacgggaagttcctagtcaacggggaaatgggttgcgagaaactg
gtgacgaataaccgattggatcgttcaccttgcccgaaggaagaggccgccgttctgccg
aaggagaaaaatgggctcgtagaggaacgggtccaagagggtatcagcaccatcgtaagg
accagcgatgtcgagagatgcattttgcatcctgcgaaggaaacggtgggagtgattgtg
cctttaagggaggagaccagccccaaagggagcgaaaaacagccggacgcgaagaagtcg
gacggggtagccgagaccatttccaaggcgggcgatcctcccaagaagcttgaagaatct
cttagaataaaggacagcgtgatactttccaaagacagcttggaaaaacccaccaagcta
ccttcccctaaagaatcggttctggtttccagtgctgacgatttgaaaaaaaaaggtcct
tcagacgagaaaagagcctcggccggtcctgatgcaactccatcttctgtttcagtcctt
tcgtttaagaaacccgcaacggacaaagaagactccgattcccaaaccgctttccctgat
caaaggcaagcatgcaaggagaaggaggcggaaacgcccaaggactccgaatctcaagaa
ggagagctgccgaccacagataccctcccaagctccgtcaaggaacctcctcccgagacg
aagaaagaatctgtaaaaaccaagtgtaaatacaagctgatttccgaagaagaaagttct
ctcaccgagaacagggaattaacctctgagaggcagaaagatgggattaagctaacgatc
cgaatctccagccggaaaaaaaccgactcgctcccggccaagtctttgaacgcagccacc
gggaaggaagagggggaggtggtcagcgtcggtcgcattttaagacggtccccccggata
tctaaaccgacccccaaggtcgtagagacccgagatcagaaatccgagaagaaacgaagc
gaggaagaggacgaaaaagtggcttccgtgcaaaagcaggagaagaaagaagactcgaaa
aaacaagagaaggagacgaactctaaaacccacaaggtttcccggcgaaataaagttcga
tgggctggcacccgaacgcgtggccgatggaggtactcgagcaacgacgacagcgaaggt
tctgagcgccaaggtgactctgaggaagaggaggaggaagaagaggaggaggaagaggag
gaagaaccagctcctgcggacgatgacgaaccatgcaagaagtgtggccttcctaatcac
ccagagctgatccttctgtgcgattcctgtgacagcggctaccacacggcgtgtctccgg
cctccgctgatgatcattccagacggcgaatggttctgcccgccttgccaacacaaattg
ctttgcgagaagttagaagaacagctgcaggacctggatgtggtcttgaaaaagaaagag
cgtgcagaacgaaggaaggaacgtcttgtctatgtgggcattagcatcgagaacatcatt
cctccgcgggagcctgaaattccagagcctgtcgacgaaaagaagaaagagtccaaaaaa
tcaaaggcaaagctgctggaaaggcggtcgaccaggcagcggaagtgtatcagctacagg
tttgatgagtttgatgaggccattgacgaagccatagaagacgacatcaaggaggccgat
ggaggaggtgtcggaagagggaaggacatgtctaacatcacaggccatcgaggcaaggat
atctccaccatcctggaggaagaaaggaaggagagcaaacggccccccagagccgctgct
ctccgacgcaagaaacggcggcggctgaacgacctggatagtgacagcaacctggatgaa
gaagagagtgaggatgaattcagaatcagtgaaggatctcaggatgagtttgtgatatcg
gatgaaaacctagacgaaagtgaagaggaccagccgtcaaacgacgacagcgacgtgggc
ttctctaagcgtaggccgagacggcaccaccctcggccaatgaggcaaagcagacgcctc
cagaggaaaacgatcaagaaaaggtactcggaagacgatgaagacgaagactccgaggat
aacttaagtggcgactctgaaaccgatgcgtcttccgaatatagcgatgaggattatttg
gaaacgagacgaaggcgaagtcggcggaatcagaagcgacaagtcaactacaaggaagat
tcggaaagcgaagggtctcagaaaagcttccgatacgggaaagagatgaggagaatacat
aagcgcaggctttccagttccgacagcgaagagagctacttggataaacattctgaggac
gaccaaccggccagattgtcgaaacggtcggcccggaaacggagccacaccaccgacgag
tactcggaaggcgaggacgaccccgaggaggaaggccggcccgttcgcaagcgcgtgaac
cgcatcgagacggacgaggaagacaacggccccgacgccggcaagccgtcgctgcccgcc
gagaaacccttggcctctcctgccccgcaagactccgtcaagaaacccagctaccggata
gaaagcgacgaggaagatgactttgacaatgtgagtaaggtggaaagcccgttggactac
agcctggtggatttgccttccaccaacggacagagccccgggaaggccatcgagaacttg
atcggtaagcccaccgagaaagccccctcgaccaaggacagcacagccaacgccactttg
gcacccaacgggacggggggcggcctggaggccggcggaccagaggaagacgaggacgaa
ctcttgcgagtaactgaccttgtggattacgtctgtaacagcgaacagttataa
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